RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 UBE2BP63146 152 aa5.7□□□□□ -1.5
NUP50-206ENST00000422489 IFITM2Q01629 132 aa5.7□□□□□ -1.5
NUP50-206ENST00000422489 LINC00173Q6ZV60 143 aa5.7□□□□□ -1.5
NUP50-206ENST00000422489 NDUFC2-KCTD14E9PQ53 114 aa5.69□□□□□ -1.5
NUP50-206ENST00000422489 IGLV7-43P04211 117 aa5.69□□□□□ -1.5
NUP50-206ENST00000422489 NPSP0C0P6 89 aa5.69□□□□□ -1.5
NUP50-206ENST00000422489 SEC11AP67812 179 aa5.69□□□□□ -1.5
NUP50-206ENST00000422489 KRTAP11-1Q8IUC1 163 aa5.69□□□□□ -1.5
NUP50-206ENST00000422489 LINC00469Q8N7U9 141 aa5.69□□□□□ -1.5
NUP50-206ENST00000422489 TOMM6Q96B49 74 aa5.69□□□□□ -1.5
NUP50-206ENST00000422489 CDKN2A-AS1Q9UH64 79 aa5.69□□□□□ -1.5
NUP50-206ENST00000422489 TRAV9-1A0A075B6T8 112 aa5.68□□□□□ -1.5
NUP50-206ENST00000422489 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.68□□□□□ -1.5
NUP50-206ENST00000422489 M0QXV9 152 aa5.68□□□□□ -1.5
NUP50-206ENST00000422489 HERVK_113P63121 156 aa5.68□□□□□ -1.5
NUP50-206ENST00000422489 FABP9Q0Z7S8 132 aa5.68□□□□□ -1.5
NUP50-206ENST00000422489 ERASQ7Z444 233 aa5.68□□□□□ -1.5
NUP50-206ENST00000422489 COMMD7Q86VX2 200 aa5.68□□□□□ -1.5
NUP50-206ENST00000422489 DIRC1Q969H9 104 aa5.68□□□□□ -1.5
NUP50-206ENST00000422489 TIMM17AQ99595 171 aa5.68□□□□□ -1.5
NUP50-206ENST00000422489 SEC11CQ9BY50 192 aa5.68□□□□□ -1.5
NUP50-206ENST00000422489 GNB1LQ9BYB4 327 aa5.68□□□□□ -1.5
NUP50-206ENST00000422489 C9orf129Q5T035 196 aaKnown RBP5.67□□□□□ -1.5
NUP50-206ENST00000422489 FA2HQ7L5A8 372 aa5.67□□□□□ -1.5
NUP50-206ENST00000422489 FAM19A3Q7Z5A8 133 aa5.67□□□□□ -1.5
NUP50-206ENST00000422489 KRTAP7-1Q8IUC3 87 aa5.67□□□□□ -1.5
NUP50-206ENST00000422489 Q8IZM0 81 aa5.67□□□□□ -1.5
NUP50-206ENST00000422489 KRTAP9-2Q9BYQ4 174 aa5.67□□□□□ -1.5
NUP50-206ENST00000422489 MRPL18Q9H0U6 180 aaKnown RBP5.67□□□□□ -1.5
NUP50-206ENST00000422489 XAGE1AQ9HD64 81 aa5.67□□□□□ -1.5
NUP50-206ENST00000422489 RPS10P5Q9NQ39 176 aa5.67□□□□□ -1.5
NUP50-206ENST00000422489 SMCO4Q9NRQ5 59 aa5.66□□□□□ -1.5
NUP50-206ENST00000422489 F8VRH5 84 aa5.65□□□□□ -1.5
NUP50-206ENST00000422489 GHRHP01286 108 aa5.65□□□□□ -1.5
NUP50-206ENST00000422489 NDUFA6P56556 154 aa5.65□□□□□ -1.5
NUP50-206ENST00000422489 COX19Q49B96 90 aa5.65□□□□□ -1.5
NUP50-206ENST00000422489 C22orf24Q9Y442 160 aa5.65□□□□□ -1.5
NUP50-206ENST00000422489 KRTAP9-6A0A140TA67 174 aa5.64□□□□□ -1.51
NUP50-206ENST00000422489 TINCRA0A1B0GVN0 87 aa5.64□□□□□ -1.51
NUP50-206ENST00000422489 H0Y9J4 135 aa5.64□□□□□ -1.51
NUP50-206ENST00000422489 SPINK8P0C7L1 97 aa5.64□□□□□ -1.51
NUP50-206ENST00000422489 RAB5BP61020 215 aa5.64□□□□□ -1.51
NUP50-206ENST00000422489 LBHQ53QV2 105 aaPredicted RBP5.64□□□□□ -1.51
NUP50-206ENST00000422489 PRR26Q8N8Z3 221 aa5.64□□□□□ -1.51
NUP50-206ENST00000422489 COX7B2Q8TF08 81 aa5.64□□□□□ -1.51
NUP50-206ENST00000422489 CST9LQ9H4G1 147 aa5.64□□□□□ -1.51
NUP50-206ENST00000422489 LINC01549A6NIU2 74 aa5.63□□□□□ -1.51
NUP50-206ENST00000422489 SMIM1B2RUZ4 78 aa5.63□□□□□ -1.51
NUP50-206ENST00000422489 CXCL5P42830 114 aa5.63□□□□□ -1.51
NUP50-206ENST00000422489 PMVKQ15126 192 aa5.63□□□□□ -1.51
NUP50-206ENST00000422489 PDZD11Q5EBL8 140 aa5.63□□□□□ -1.51
NUP50-206ENST00000422489 LINC01546A6NGU7 62 aa5.62□□□□□ -1.51
NUP50-206ENST00000422489 RHEBQ15382 184 aa5.62□□□□□ -1.51
NUP50-206ENST00000422489 SVIPQ8NHG7 77 aa5.62□□□□□ -1.51
NUP50-206ENST00000422489 TRAPPC1Q9Y5R8 145 aa5.62□□□□□ -1.51
NUP50-206ENST00000422489 UBR4Q5T4S7 5183 aa5.62□□□□□ -1.51
NUP50-206ENST00000422489 H3BRM9 83 aa5.61□□□□□ -1.51
NUP50-206ENST00000422489 LINC00614P0C842 121 aa5.61□□□□□ -1.51
NUP50-206ENST00000422489 C10orf91Q5T1B1 145 aa5.61□□□□□ -1.51
NUP50-206ENST00000422489 CARHSP1Q9Y2V2 147 aaKnown RBP5.61□□□□□ -1.51
NUP50-206ENST00000422489 IGLV5-45A0A087WSX0 123 aa5.6□□□□□ -1.51
NUP50-206ENST00000422489 GAGE10A6NGK3 116 aa5.6□□□□□ -1.51
NUP50-206ENST00000422489 RPL37AP8A6NKH3 93 aa5.6□□□□□ -1.51
NUP50-206ENST00000422489 ZNF861PO60384 105 aa5.6□□□□□ -1.51
NUP50-206ENST00000422489 APOC3P02656 99 aa5.6□□□□□ -1.51
NUP50-206ENST00000422489 MRPL55Q7Z7F7 128 aaKnown RBP5.6□□□□□ -1.51
NUP50-206ENST00000422489 NUPR1O60356 82 aa5.59□□□□□ -1.51
NUP50-206ENST00000422489 ATP5LO75964 103 aa5.59□□□□□ -1.51
NUP50-206ENST00000422489 PMCHL1Q16048 86 aa5.59□□□□□ -1.51
NUP50-206ENST00000422489 LINC00167Q96N53 147 aa5.59□□□□□ -1.51
NUP50-206ENST00000422489 IGLV1-50A0A075B6I6 118 aa5.58□□□□□ -1.52
NUP50-206ENST00000422489 PFN2P35080 140 aa5.58□□□□□ -1.52
NUP50-206ENST00000422489 LCE3BQ5TA77 95 aa5.58□□□□□ -1.52
NUP50-206ENST00000422489 NKAPP1Q8N9T2 125 aa5.58□□□□□ -1.52
NUP50-206ENST00000422489 C18orf32Q8TCD1 76 aa5.58□□□□□ -1.52
NUP50-206ENST00000422489 URB1-AS1Q96HZ7 61 aa5.58□□□□□ -1.52
NUP50-206ENST00000422489 HBDP02042 147 aa5.57□□□□□ -1.52
NUP50-206ENST00000422489 KRTAP1-4P0C5Y4 121 aa5.57□□□□□ -1.52
NUP50-206ENST00000422489 IGLC3P0DOY3 106 aa5.57□□□□□ -1.52
NUP50-206ENST00000422489 RPL28P46779 137 aaKnown RBP5.57□□□□□ -1.52
NUP50-206ENST00000422489 NDUFA5Q16718 116 aa5.57□□□□□ -1.52
NUP50-206ENST00000422489 BAGE3Q86Y29 109 aa5.57□□□□□ -1.52
NUP50-206ENST00000422489 ZNF625Q96I27 306 aaPredicted RBP5.57□□□□□ -1.52
NUP50-206ENST00000422489 TP73-AS1Q9UF72 201 aa5.57□□□□□ -1.52
NUP50-206ENST00000422489 A0A096LNJ9 63 aa5.56□□□□□ -1.52
NUP50-206ENST00000422489 BCE1O60756 84 aa5.56□□□□□ -1.52
NUP50-206ENST00000422489 SNAPINO95295 136 aa5.56□□□□□ -1.52
NUP50-206ENST00000422489 ZNF22P17026 224 aaPredicted RBP5.56□□□□□ -1.52
NUP50-206ENST00000422489 TMEM170BQ5T4T1 132 aa5.56□□□□□ -1.52
NUP50-206ENST00000422489 KRTAP4-12Q9BQ66 201 aa5.56□□□□□ -1.52
NUP50-206ENST00000422489 TNXBP22105 4242 aa5.56□□□□□ -1.52
NUP50-206ENST00000422489 SCO1O75880 301 aa5.55□□□□□ -1.52
NUP50-206ENST00000422489 RPL13AP40429 203 aaKnown RBP5.55□□□□□ -1.52
NUP50-206ENST00000422489 UBE2AP49459 152 aa5.55□□□□□ -1.52
NUP50-206ENST00000422489 SVBPQ8N300 66 aa5.55□□□□□ -1.52
NUP50-206ENST00000422489 IGKV2-28A0A075B6P5 120 aa5.54□□□□□ -1.52
NUP50-206ENST00000422489 IGLV5-39A0A0G2JS06 123 aa5.54□□□□□ -1.52
NUP50-206ENST00000422489 TMEM238LA0A1B0GVL6 79 aa5.54□□□□□ -1.52
NUP50-206ENST00000422489 C11orf86A6NJI1 115 aa5.54□□□□□ -1.52
NUP50-206ENST00000422489 TSPAN13O95857 204 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms