RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 HIVEP1P15822 2718 aa-0.42□□□□□ -2.48
LINC00397-201ENST00000422074 SCN7AQ01118 1682 aa-0.42□□□□□ -2.48
LINC00397-201ENST00000422074 NBPF19A0A087WUL8 3843 aa-0.42□□□□□ -2.48
LINC00397-201ENST00000422074 COX6CP09669 75 aa-0.42□□□□□ -2.48
LINC00397-201ENST00000422074 TRAPPC2P0DI81 140 aa-0.42□□□□□ -2.48
LINC00397-201ENST00000422074 TRAPPC2BP0DI82 140 aa-0.42□□□□□ -2.48
LINC00397-201ENST00000422074 MT4P47944 62 aa-0.42□□□□□ -2.48
LINC00397-201ENST00000422074 SCAPERQ9BY12 1400 aa-0.42□□□□□ -2.48
LINC00397-201ENST00000422074 FMN2Q9NZ56 1722 aa-0.42□□□□□ -2.48
LINC00397-201ENST00000422074 USH2AO75445 5202 aa-0.42□□□□□ -2.48
LINC00397-201ENST00000422074 TACC2O95359 2948 aa-0.42□□□□□ -2.48
LINC00397-201ENST00000422074 HMGXB3Q12766 1538 aa-0.43□□□□□ -2.48
LINC00397-201ENST00000422074 TULP4Q9NRJ4 1543 aa-0.43□□□□□ -2.48
LINC00397-201ENST00000422074 ITPR3Q14573 2671 aa-0.43□□□□□ -2.48
LINC00397-201ENST00000422074 NRKQ7Z2Y5 1582 aa-0.43□□□□□ -2.48
LINC00397-201ENST00000422074 NAP1L6A6NFF2 107 aa-0.43□□□□□ -2.48
LINC00397-201ENST00000422074 GNG4P50150 75 aa-0.43□□□□□ -2.48
LINC00397-201ENST00000422074 Q0VG73 95 aa-0.43□□□□□ -2.48
LINC00397-201ENST00000422074 DEFB135Q30KP9 77 aa-0.43□□□□□ -2.48
LINC00397-201ENST00000422074 LINC01600Q96MT4 127 aa-0.43□□□□□ -2.48
LINC00397-201ENST00000422074 SPRR4Q96PI1 79 aa-0.43□□□□□ -2.48
LINC00397-201ENST00000422074 DPH3P1Q9H4G8 78 aa-0.43□□□□□ -2.48
LINC00397-201ENST00000422074 APLNQ9ULZ1 77 aa-0.43□□□□□ -2.48
LINC00397-201ENST00000422074 KIAA0556O60303 1618 aa-0.43□□□□□ -2.48
LINC00397-201ENST00000422074 CCDC141Q6ZP82 1450 aa-0.43□□□□□ -2.48
LINC00397-201ENST00000422074 DIP2CQ9Y2E4 1556 aa-0.44□□□□□ -2.48
LINC00397-201ENST00000422074 DOPEY1Q5JWR5 2465 aa-0.44□□□□□ -2.48
LINC00397-201ENST00000422074 HERC2O95714 4834 aa-0.44□□□□□ -2.48
LINC00397-201ENST00000422074 DNAH6Q9C0G6 4158 aa-0.44□□□□□ -2.48
LINC00397-201ENST00000422074 LINC00959A0A1B0GUT2 108 aa-0.44□□□□□ -2.48
LINC00397-201ENST00000422074 A0A1B0GWA3 101 aa-0.44□□□□□ -2.48
LINC00397-201ENST00000422074 CPSF4LA6NMK7 179 aaKnown RBP-0.44□□□□□ -2.48
LINC00397-201ENST00000422074 SFTA2Q6UW10 78 aa-0.44□□□□□ -2.48
LINC00397-201ENST00000422074 C12orf57Q99622 126 aa-0.44□□□□□ -2.48
LINC00397-201ENST00000422074 HTTP42858 3142 aa-0.44□□□□□ -2.48
LINC00397-201ENST00000422074 NUP188Q5SRE5 1749 aa-0.44□□□□□ -2.48
LINC00397-201ENST00000422074 PRRC2CQ9Y520 2896 aaKnown RBP-0.44□□□□□ -2.48
LINC00397-201ENST00000422074 PDE4DIPQ5VU43 2346 aa-0.44□□□□□ -2.48
LINC00397-201ENST00000422074 FASNP49327 2511 aaKnown RBP-0.44□□□□□ -2.48
LINC00397-201ENST00000422074 PDCD11Q14690 1871 aaKnown RBP-0.45□□□□□ -2.48
LINC00397-201ENST00000422074 EFCAB10A6NFE3 127 aa-0.45□□□□□ -2.48
LINC00397-201ENST00000422074 SPRR2EP22531 72 aa-0.45□□□□□ -2.48
LINC00397-201ENST00000422074 PPP3R1P63098 170 aa-0.45□□□□□ -2.48
LINC00397-201ENST00000422074 PRO1854Q9UHT4 67 aa-0.45□□□□□ -2.48
LINC00397-201ENST00000422074 MYO18BQ8IUG5 2567 aa-0.45□□□□□ -2.48
LINC00397-201ENST00000422074 A0A0G2JMZ2 1700 aa-0.45□□□□□ -2.48
LINC00397-201ENST00000422074 SONP18583 2426 aaKnown RBP-0.45□□□□□ -2.48
LINC00397-201ENST00000422074 REV3LO60673 3130 aa-0.45□□□□□ -2.48
LINC00397-201ENST00000422074 STARD9Q9P2P6 4700 aa-0.45□□□□□ -2.48
LINC00397-201ENST00000422074 ANKRD36A6QL64 1941 aa-0.46□□□□□ -2.48
LINC00397-201ENST00000422074 C1orf167Q5SNV9 1468 aa-0.46□□□□□ -2.48
LINC00397-201ENST00000422074 PAPPA2Q9BXP8 1791 aa-0.46□□□□□ -2.48
LINC00397-201ENST00000422074 DLEU1O43261 78 aa-0.46□□□□□ -2.48
LINC00397-201ENST00000422074 SEC11AP67812 179 aa-0.46□□□□□ -2.48
LINC00397-201ENST00000422074 DEFB112Q30KQ8 113 aa-0.46□□□□□ -2.48
LINC00397-201ENST00000422074 CRIPTQ9P021 101 aa-0.46□□□□□ -2.48
LINC00397-201ENST00000422074 ACACAQ13085 2346 aa-0.46□□□□□ -2.48
LINC00397-201ENST00000422074 HECTD1Q9ULT8 2610 aa-0.46□□□□□ -2.48
LINC00397-201ENST00000422074 TRANK1O15050 2925 aa-0.46□□□□□ -2.48
LINC00397-201ENST00000422074 XRN1Q8IZH2 1706 aaKnown RBP-0.47□□□□□ -2.48
LINC00397-201ENST00000422074 COL14A1Q05707 1796 aaKnown RBP-0.47□□□□□ -2.48
LINC00397-201ENST00000422074 AKAP9Q99996 3911 aa-0.47□□□□□ -2.48
LINC00397-201ENST00000422074 CRYM-AS1A6NIL9 109 aa-0.47□□□□□ -2.48
LINC00397-201ENST00000422074 FAM223BA6NKX1 122 aa-0.47□□□□□ -2.48
LINC00397-201ENST00000422074 I3L3M4 83 aa-0.47□□□□□ -2.48
LINC00397-201ENST00000422074 S100A1P23297 94 aa-0.47□□□□□ -2.48
LINC00397-201ENST00000422074 UBE2D3P61077 147 aa-0.47□□□□□ -2.48
LINC00397-201ENST00000422074 UBE2D2P62837 147 aa-0.47□□□□□ -2.48
LINC00397-201ENST00000422074 C9orf62Q8N4C0 152 aa-0.47□□□□□ -2.48
LINC00397-201ENST00000422074 IER3IP1Q9Y5U9 82 aa-0.47□□□□□ -2.48
LINC00397-201ENST00000422074 TEP1Q99973 2627 aaKnown RBP-0.47□□□□□ -2.48
LINC00397-201ENST00000422074 ZZEF1O43149 2961 aa-0.47□□□□□ -2.48
LINC00397-201ENST00000422074 ARHGAP5Q13017 1502 aa-0.48□□□□□ -2.49
LINC00397-201ENST00000422074 PKD1P98161 4303 aa-0.48□□□□□ -2.49
LINC00397-201ENST00000422074 A0A1B0GV90 55 aa-0.48□□□□□ -2.49
LINC00397-201ENST00000422074 H1FX-AS1Q4G0G2 97 aa-0.48□□□□□ -2.49
LINC00397-201ENST00000422074 UBR4Q5T4S7 5183 aa-0.48□□□□□ -2.49
LINC00397-201ENST00000422074 AKAP13Q12802 2813 aa-0.48□□□□□ -2.49
LINC00397-201ENST00000422074 MAPKBP1O60336 1514 aa-0.48□□□□□ -2.49
LINC00397-201ENST00000422074 A0A1B0GU69 56 aa-0.49□□□□□ -2.49
LINC00397-201ENST00000422074 H0YGG7 62 aa-0.49□□□□□ -2.49
LINC00397-201ENST00000422074 SAA2P0DJI9 122 aaPredicted RBP-0.49□□□□□ -2.49
LINC00397-201ENST00000422074 SNCAP37840 140 aa-0.49□□□□□ -2.49
LINC00397-201ENST00000422074 ADGRL2O95490 1459 aa-0.49□□□□□ -2.49
LINC00397-201ENST00000422074 CC2D2AQ9P2K1 1620 aa-0.49□□□□□ -2.49
LINC00397-201ENST00000422074 MARF1Q9Y4F3 1742 aaKnown RBP-0.5□□□□□ -2.49
LINC00397-201ENST00000422074 TNRC18O15417 2968 aaPredicted RBP-0.5□□□□□ -2.49
LINC00397-201ENST00000422074 VPS13DQ5THJ4 4388 aa-0.5□□□□□ -2.49
LINC00397-201ENST00000422074 DNAH9Q9NYC9 4486 aa-0.5□□□□□ -2.49
LINC00397-201ENST00000422074 CORTO00230 105 aa-0.5□□□□□ -2.49
LINC00397-201ENST00000422074 KRTDAPP60985 99 aa-0.5□□□□□ -2.49
LINC00397-201ENST00000422074 LCN9Q8WX39 176 aa-0.5□□□□□ -2.49
LINC00397-201ENST00000422074 VAMP8Q9BV40 100 aa-0.5□□□□□ -2.49
LINC00397-201ENST00000422074 LINC00846Q9NV44 126 aa-0.5□□□□□ -2.49
LINC00397-201ENST00000422074 GNG8Q9UK08 70 aa-0.5□□□□□ -2.49
LINC00397-201ENST00000422074 PLEKHH2Q8IVE3 1493 aa-0.5□□□□□ -2.49
LINC00397-201ENST00000422074 NLRP1Q9C000 1473 aa-0.5□□□□□ -2.49
LINC00397-201ENST00000422074 LRRK2Q5S007 2527 aa-0.5□□□□□ -2.49
LINC00397-201ENST00000422074 DNAH3Q8TD57 4116 aa-0.51□□□□□ -2.49
LINC00397-201ENST00000422074 TRAV30A0A087WSZ9 112 aa-0.51□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms