RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 A0A0J9YXY3 114 aa6.9□□□□□ -1.31
CMSS1-201ENST00000421999 H0YGX0 51 aa6.9□□□□□ -1.31
CMSS1-201ENST00000421999 FXYD2P54710 66 aa6.9□□□□□ -1.31
CMSS1-201ENST00000421999 FAM19A1Q7Z5A9 133 aa6.9□□□□□ -1.31
CMSS1-201ENST00000421999 SPATA12Q7Z6I5 190 aa6.9□□□□□ -1.31
CMSS1-201ENST00000421999 ORMDL1Q9P0S3 153 aa6.9□□□□□ -1.31
CMSS1-201ENST00000421999 NSD1Q96L73 2696 aaPredicted RBP6.9□□□□□ -1.31
CMSS1-201ENST00000421999 K7EP34 96 aa6.9□□□□□ -1.31
CMSS1-201ENST00000421999 URB1-AS1Q96HZ7 61 aa6.9□□□□□ -1.31
CMSS1-201ENST00000421999 CHCHD7Q9BUK0 85 aa6.9□□□□□ -1.31
CMSS1-201ENST00000421999 KMT2BQ9UMN6 2715 aaPredicted RBP6.89□□□□□ -1.31
CMSS1-201ENST00000421999 IGLV4-69A0A075B6H9 119 aa6.89□□□□□ -1.31
CMSS1-201ENST00000421999 SS18L2Q9UHA2 77 aa6.89□□□□□ -1.31
CMSS1-201ENST00000421999 LINC00694P0DN24 101 aa6.89□□□□□ -1.31
CMSS1-201ENST00000421999 C1orf134Q5TEV5 83 aa6.89□□□□□ -1.31
CMSS1-201ENST00000421999 LYPD5Q6UWN5 251 aa6.89□□□□□ -1.31
CMSS1-201ENST00000421999 SPANXCQ9NY87 97 aa6.89□□□□□ -1.31
CMSS1-201ENST00000421999 B9D2Q9BPU9 175 aa6.89□□□□□ -1.31
CMSS1-201ENST00000421999 NF1P21359 2839 aa6.89□□□□□ -1.31
CMSS1-201ENST00000421999 BAALC-AS2P0C853 105 aa6.88□□□□□ -1.31
CMSS1-201ENST00000421999 C9orf153Q5TBE3 101 aa6.88□□□□□ -1.31
CMSS1-201ENST00000421999 IBA57-AS1B1ANH7 110 aa6.88□□□□□ -1.31
CMSS1-201ENST00000421999 MDFIQ99750 246 aa6.88□□□□□ -1.31
CMSS1-201ENST00000421999 TENM4Q6N022 2769 aa6.88□□□□□ -1.31
CMSS1-201ENST00000421999 IGKV2-28A0A075B6P5 120 aa6.87□□□□□ -1.31
CMSS1-201ENST00000421999 IGKV2D-28P01615 120 aa6.87□□□□□ -1.31
CMSS1-201ENST00000421999 UBL5Q9BZL1 73 aa6.87□□□□□ -1.31
CMSS1-201ENST00000421999 NIPBLQ6KC79 2804 aaeCLIP6.87□□□□□ -1.31
CMSS1-201ENST00000421999 hADV29S1A0JD25 119 aa6.87□□□□□ -1.31
CMSS1-201ENST00000421999 TMEM223A0PJW6 202 aa6.87□□□□□ -1.31
CMSS1-201ENST00000421999 KIF25-AS1Q9Y6Z4 181 aa6.87□□□□□ -1.31
CMSS1-201ENST00000421999 CYSRT1A8MQ03 144 aa6.87□□□□□ -1.31
CMSS1-201ENST00000421999 MRPS36P82909 103 aaKnown RBP6.87□□□□□ -1.31
CMSS1-201ENST00000421999 SPATA3Q8NHX4 192 aa6.87□□□□□ -1.31
CMSS1-201ENST00000421999 TAX1BP3O14907 124 aa6.87□□□□□ -1.31
CMSS1-201ENST00000421999 FUSP35637 526 aaKnown RBP eCLIP6.87□□□□□ -1.31
CMSS1-201ENST00000421999 X6R8D5 127 aa6.87□□□□□ -1.31
CMSS1-201ENST00000421999 A0A1W2PPM0 123 aa6.86□□□□□ -1.31
CMSS1-201ENST00000421999 COX7BP24311 80 aa6.86□□□□□ -1.31
CMSS1-201ENST00000421999 USP17L23D6RBM5 183 aa6.86□□□□□ -1.31
CMSS1-201ENST00000421999 UBE2D1P51668 147 aa6.85□□□□□ -1.31
CMSS1-201ENST00000421999 FOXI1Q12951 378 aa6.85□□□□□ -1.31
CMSS1-201ENST00000421999 LINC00242Q5T6M2 205 aa6.85□□□□□ -1.31
CMSS1-201ENST00000421999 UNQ6190/PRO20217Q6UXQ8 127 aa6.85□□□□□ -1.31
CMSS1-201ENST00000421999 POM121L12Q8N7R1 296 aa6.85□□□□□ -1.31
CMSS1-201ENST00000421999 FBN2P35556 2912 aa6.85□□□□□ -1.31
CMSS1-201ENST00000421999 NTN5Q8WTR8 489 aaPredicted RBP6.85□□□□□ -1.31
CMSS1-201ENST00000421999 SMIM20Q8N5G0 67 aa6.85□□□□□ -1.31
CMSS1-201ENST00000421999 MUC7Q8TAX7 377 aa6.85□□□□□ -1.31
CMSS1-201ENST00000421999 HIGD1BQ9P298 99 aa6.85□□□□□ -1.31
CMSS1-201ENST00000421999 Q9UF83 564 aa6.85□□□□□ -1.31
CMSS1-201ENST00000421999 IGKV2D-26A0A0A0MRZ7 120 aa6.85□□□□□ -1.31
CMSS1-201ENST00000421999 IGLV5-52A0A0A0MRZ9 124 aa6.85□□□□□ -1.31
CMSS1-201ENST00000421999 LOC107984640A0A0U1RRK4 108 aa6.85□□□□□ -1.31
CMSS1-201ENST00000421999 K7EIL1 84 aa6.85□□□□□ -1.31
CMSS1-201ENST00000421999 LINC00315P59091 139 aa6.84□□□□□ -1.31
CMSS1-201ENST00000421999 C19orf73Q9NVV2 129 aa6.84□□□□□ -1.31
CMSS1-201ENST00000421999 B5MCH6 92 aa6.84□□□□□ -1.32
CMSS1-201ENST00000421999 ESRGQ1W209 222 aa6.83□□□□□ -1.32
CMSS1-201ENST00000421999 WWC2-AS2Q96NR7 200 aa6.83□□□□□ -1.32
CMSS1-201ENST00000421999 IGIPA6NJ69 53 aa6.83□□□□□ -1.32
CMSS1-201ENST00000421999 KRTAP10-11P60412 298 aa6.83□□□□□ -1.32
CMSS1-201ENST00000421999 LINC00308Q8TCZ7 52 aa6.83□□□□□ -1.32
CMSS1-201ENST00000421999 TP73-AS1Q9UF72 201 aa6.83□□□□□ -1.32
CMSS1-201ENST00000421999 TRACP01848 142 aa6.83□□□□□ -1.32
CMSS1-201ENST00000421999 NBEAL2Q6ZNJ1 2754 aa6.83□□□□□ -1.32
CMSS1-201ENST00000421999 RPL37AP8A6NKH3 93 aa6.82□□□□□ -1.32
CMSS1-201ENST00000421999 CLEC2BQ92478 149 aa6.82□□□□□ -1.32
CMSS1-201ENST00000421999 F8W1H4 67 aa6.82□□□□□ -1.32
CMSS1-201ENST00000421999 A0A096LNJ9 63 aa6.82□□□□□ -1.32
CMSS1-201ENST00000421999 COX6A2Q02221 97 aa6.82□□□□□ -1.32
CMSS1-201ENST00000421999 C9orf116Q5BN46 136 aaPredicted RBP6.82□□□□□ -1.32
CMSS1-201ENST00000421999 C6orf223Q8N319 242 aa6.82□□□□□ -1.32
CMSS1-201ENST00000421999 PTH2Q96A98 100 aa6.82□□□□□ -1.32
CMSS1-201ENST00000421999 C6orf99Q4VX62 202 aa6.82□□□□□ -1.32
CMSS1-201ENST00000421999 MAPKAPK5-AS1Q8N8E1 139 aa6.82□□□□□ -1.32
CMSS1-201ENST00000421999 Q8NAQ8 132 aa6.82□□□□□ -1.32
CMSS1-201ENST00000421999 Q8IZM0 81 aa6.81□□□□□ -1.32
CMSS1-201ENST00000421999 PPDPFQ9H3Y8 114 aa6.81□□□□□ -1.32
CMSS1-201ENST00000421999 SPANXDQ9BXN6 97 aa6.81□□□□□ -1.32
CMSS1-201ENST00000421999 NDUFS5O43920 106 aa6.81□□□□□ -1.32
CMSS1-201ENST00000421999 A8MTW9 85 aa6.8□□□□□ -1.32
CMSS1-201ENST00000421999 GIG44P09565 113 aaPredicted RBP6.8□□□□□ -1.32
CMSS1-201ENST00000421999 ANKRD29Q8N6D5 301 aa6.8□□□□□ -1.32
CMSS1-201ENST00000421999 PPDPFLQ8WWR9 84 aa6.8□□□□□ -1.32
CMSS1-201ENST00000421999 LINC00474Q9P2X8 69 aa6.8□□□□□ -1.32
CMSS1-201ENST00000421999 SPANXB1Q9NS25 103 aaPredicted RBP6.8□□□□□ -1.32
CMSS1-201ENST00000421999 A0A1B0GUV1 79 aa6.8□□□□□ -1.32
CMSS1-201ENST00000421999 LINC01620Q4KN68 170 aa6.8□□□□□ -1.32
CMSS1-201ENST00000421999 CSNK1G2-AS1Q8NCQ2 148 aa6.8□□□□□ -1.32
CMSS1-201ENST00000421999 MXRA5Q9NR99 2828 aa6.79□□□□□ -1.32
CMSS1-201ENST00000421999 EGFEM1PQ0D2K5 195 aa6.79□□□□□ -1.32
CMSS1-201ENST00000421999 SMIM1B2RUZ4 78 aa6.78□□□□□ -1.32
CMSS1-201ENST00000421999 CSDC2Q9Y534 153 aaKnown RBP6.78□□□□□ -1.32
CMSS1-201ENST00000421999 NDUFB1O75438 58 aa6.77□□□□□ -1.32
CMSS1-201ENST00000421999 M0QXV9 152 aa6.77□□□□□ -1.33
CMSS1-201ENST00000421999 M0R378 163 aa6.77□□□□□ -1.33
CMSS1-201ENST00000421999 TRAV23DV6A0A075B6W5 121 aa6.77□□□□□ -1.33
CMSS1-201ENST00000421999 RBM3P98179 157 aaKnown RBP6.77□□□□□ -1.33
CMSS1-201ENST00000421999 NREPQ16612 68 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms