RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 GAGE2EQ4V326 116 aa10.56□□□□□ -0.72
MSH6-203ENST00000420813 TEX43Q6ZNM6 134 aa10.56□□□□□ -0.72
MSH6-203ENST00000420813 FAM19A5Q7Z5A7 132 aaPredicted RBP10.56□□□□□ -0.72
MSH6-203ENST00000420813 MAP1LC3AQ9H492 121 aa10.56□□□□□ -0.72
MSH6-203ENST00000420813 GAGE2DQ9UEU5 116 aa10.56□□□□□ -0.72
MSH6-203ENST00000420813 UBE2D1P51668 147 aa10.55□□□□□ -0.72
MSH6-203ENST00000420813 KRTAP11-1Q8IUC1 163 aa10.55□□□□□ -0.72
MSH6-203ENST00000420813 C2orf88Q9BSF0 95 aa10.55□□□□□ -0.72
MSH6-203ENST00000420813 NDUFC2-KCTD14E9PQ53 114 aa10.54□□□□□ -0.72
MSH6-203ENST00000420813 H0Y9J4 135 aa10.54□□□□□ -0.72
MSH6-203ENST00000420813 CYSLTR1Q9Y271 337 aa10.54□□□□□ -0.72
MSH6-203ENST00000420813 LOC389332A0A1B0GUA5 103 aa10.53□□□□□ -0.72
MSH6-203ENST00000420813 NPSP0C0P6 89 aa10.53□□□□□ -0.72
MSH6-203ENST00000420813 C2orf66Q6UXQ4 117 aa10.53□□□□□ -0.72
MSH6-203ENST00000420813 Q6ZN92 141 aa10.53□□□□□ -0.72
MSH6-203ENST00000420813 KRTAP7-1Q8IUC3 87 aa10.53□□□□□ -0.72
MSH6-203ENST00000420813 Q8N8P6 123 aa10.53□□□□□ -0.72
MSH6-203ENST00000420813 PACRGQ96M98 296 aaPredicted RBP10.53□□□□□ -0.72
MSH6-203ENST00000420813 LOC105371267A0A1B0GV96 52 aa10.52□□□□□ -0.73
MSH6-203ENST00000420813 K7EMI3 77 aa10.52□□□□□ -0.73
MSH6-203ENST00000420813 M0QXV9 152 aa10.52□□□□□ -0.73
MSH6-203ENST00000420813 C2orf82Q6UX34 121 aa10.52□□□□□ -0.73
MSH6-203ENST00000420813 AMELXQ99217 191 aa10.52□□□□□ -0.73
MSH6-203ENST00000420813 NDUFA6P56556 154 aa10.51□□□□□ -0.73
MSH6-203ENST00000420813 ORMDL2Q53FV1 153 aa10.51□□□□□ -0.73
MSH6-203ENST00000420813 LINC00173Q6ZV60 143 aa10.51□□□□□ -0.73
MSH6-203ENST00000420813 PRR26Q8N8Z3 221 aa10.51□□□□□ -0.73
MSH6-203ENST00000420813 C5orf52A6NGY3 159 aa10.5□□□□□ -0.73
MSH6-203ENST00000420813 UBE2BP63146 152 aa10.5□□□□□ -0.73
MSH6-203ENST00000420813 COA6Q5JTJ3 125 aaKnown RBP10.5□□□□□ -0.73
MSH6-203ENST00000420813 VCX2Q9H322 139 aa10.5□□□□□ -0.73
MSH6-203ENST00000420813 IGLV1-50A0A075B6I6 118 aa10.49□□□□□ -0.73
MSH6-203ENST00000420813 PRSS2P07478 247 aa10.49□□□□□ -0.73
MSH6-203ENST00000420813 SNRPEP62304 92 aaKnown RBP10.49□□□□□ -0.73
MSH6-203ENST00000420813 C9orf129Q5T035 196 aaKnown RBP10.49□□□□□ -0.73
MSH6-203ENST00000420813 FAM19A3Q7Z5A8 133 aa10.49□□□□□ -0.73
MSH6-203ENST00000420813 IGIPA6NJ69 53 aa10.48□□□□□ -0.73
MSH6-203ENST00000420813 KRTAP1-4P0C5Y4 121 aa10.47□□□□□ -0.73
MSH6-203ENST00000420813 PAPPA-AS1Q5QFB9 102 aa10.47□□□□□ -0.73
MSH6-203ENST00000420813 ZC2HC1BQ5TFG8 222 aa10.47□□□□□ -0.73
MSH6-203ENST00000420813 Q8IZM0 81 aa10.47□□□□□ -0.73
MSH6-203ENST00000420813 NXT2Q9NPJ8 142 aaKnown RBP10.47□□□□□ -0.73
MSH6-203ENST00000420813 G0S2P27469 103 aa10.46□□□□□ -0.73
MSH6-203ENST00000420813 CKS1BP61024 79 aa10.46□□□□□ -0.73
MSH6-203ENST00000420813 SEC11AP67812 179 aa10.46□□□□□ -0.73
MSH6-203ENST00000420813 KIAA1644Q3SXP7 199 aa10.46□□□□□ -0.73
MSH6-203ENST00000420813 TOMM7Q9P0U1 55 aa10.46□□□□□ -0.73
MSH6-203ENST00000420813 HERVK_113P63121 156 aa10.45□□□□□ -0.74
MSH6-203ENST00000420813 C6orf226Q5I0X4 101 aa10.45□□□□□ -0.74
MSH6-203ENST00000420813 HIST3H2BBQ8N257 126 aa10.45□□□□□ -0.74
MSH6-203ENST00000420813 ALKBH7Q9BT30 221 aaPredicted RBP10.45□□□□□ -0.74
MSH6-203ENST00000420813 S100A2P29034 98 aa10.44□□□□□ -0.74
MSH6-203ENST00000420813 BAGE3Q86Y29 109 aa10.44□□□□□ -0.74
MSH6-203ENST00000420813 C18orf32Q8TCD1 76 aa10.44□□□□□ -0.74
MSH6-203ENST00000420813 TIMM17AQ99595 171 aa10.44□□□□□ -0.74
MSH6-203ENST00000420813 RPL13AP40429 203 aaKnown RBP10.43□□□□□ -0.74
MSH6-203ENST00000420813 LPAP08519 4548 aa10.43□□□□□ -0.74
MSH6-203ENST00000420813 NUPR1O60356 82 aa10.42□□□□□ -0.74
MSH6-203ENST00000420813 CDKN2A-AS1Q9UH64 79 aa10.42□□□□□ -0.74
MSH6-203ENST00000420813 F8VRH5 84 aa10.41□□□□□ -0.74
MSH6-203ENST00000420813 SERF1AO75920 110 aa10.41□□□□□ -0.74
MSH6-203ENST00000420813 AKR1D1P51857 326 aa10.41□□□□□ -0.74
MSH6-203ENST00000420813 TOMM6Q96B49 74 aa10.41□□□□□ -0.74
MSH6-203ENST00000420813 GEMIN7Q9H840 131 aaKnown RBP10.41□□□□□ -0.74
MSH6-203ENST00000420813 C22orf24Q9Y442 160 aa10.41□□□□□ -0.74
MSH6-203ENST00000420813 ZNF861PO60384 105 aa10.4□□□□□ -0.74
MSH6-203ENST00000420813 CXCL5P42830 114 aa10.4□□□□□ -0.74
MSH6-203ENST00000420813 LBHQ53QV2 105 aaPredicted RBP10.4□□□□□ -0.74
MSH6-203ENST00000420813 PDZD11Q5EBL8 140 aa10.4□□□□□ -0.74
MSH6-203ENST00000420813 LINC00469Q8N7U9 141 aa10.4□□□□□ -0.74
MSH6-203ENST00000420813 LINC00310P59036 64 aa10.39□□□□□ -0.75
MSH6-203ENST00000420813 XAGE1AQ9HD64 81 aa10.39□□□□□ -0.75
MSH6-203ENST00000420813 TP73-AS1Q9UF72 201 aa10.39□□□□□ -0.75
MSH6-203ENST00000420813 ERASQ7Z444 233 aa10.38□□□□□ -0.75
MSH6-203ENST00000420813 HIST1H2BLQ99880 126 aa10.38□□□□□ -0.75
MSH6-203ENST00000420813 FABP4P15090 132 aa10.37□□□□□ -0.75
MSH6-203ENST00000420813 CHCHD1Q96BP2 118 aaKnown RBP10.37□□□□□ -0.75
MSH6-203ENST00000420813 LINC01549A6NIU2 74 aa10.36□□□□□ -0.75
MSH6-203ENST00000420813 HSBP1O75506 76 aa10.36□□□□□ -0.75
MSH6-203ENST00000420813 SCGB3A1Q96QR1 104 aa10.36□□□□□ -0.75
MSH6-203ENST00000420813 SMIM1B2RUZ4 78 aa10.35□□□□□ -0.75
MSH6-203ENST00000420813 SMIM6P0DI80 62 aa10.35□□□□□ -0.75
MSH6-203ENST00000420813 MRPL55Q7Z7F7 128 aaKnown RBP10.35□□□□□ -0.75
MSH6-203ENST00000420813 IGLV5-45A0A087WSX0 123 aa10.34□□□□□ -0.75
MSH6-203ENST00000420813 TINCRA0A1B0GVN0 87 aa10.34□□□□□ -0.75
MSH6-203ENST00000420813 FA2HQ7L5A8 372 aa10.34□□□□□ -0.75
MSH6-203ENST00000420813 LINC01546A6NGU7 62 aa10.33□□□□□ -0.76
MSH6-203ENST00000420813 COX7B2Q8TF08 81 aa10.33□□□□□ -0.76
MSH6-203ENST00000420813 BCE1O60756 84 aa10.32□□□□□ -0.76
MSH6-203ENST00000420813 RPL28P46779 137 aaKnown RBP10.32□□□□□ -0.76
MSH6-203ENST00000420813 URB1-AS1Q96HZ7 61 aa10.31□□□□□ -0.76
MSH6-203ENST00000420813 LINC00614P0C842 121 aa10.3□□□□□ -0.76
MSH6-203ENST00000420813 PRR4Q16378 134 aa10.3□□□□□ -0.76
MSH6-203ENST00000420813 LINC00167Q96N53 147 aa10.29□□□□□ -0.76
MSH6-203ENST00000420813 CST9LQ9H4G1 147 aa10.29□□□□□ -0.76
MSH6-203ENST00000420813 IGLV5-37A0A075B6J1 123 aa10.28□□□□□ -0.76
MSH6-203ENST00000420813 PMVKQ15126 192 aa10.28□□□□□ -0.76
MSH6-203ENST00000420813 A0A087X002 238 aa10.26□□□□□ -0.77
MSH6-203ENST00000420813 RPL37AP8A6NKH3 93 aa10.26□□□□□ -0.77
MSH6-203ENST00000420813 SPINK8P0C7L1 97 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms