RNA–Protein interactions for RNA: ENST00000420330.1

AC009404.1-201, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 3,090 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-201ENST00000420330 IGHV1-58A0A0C4DH39 117 aa4.59□□□□□ -1.67
AC009404.1-201ENST00000420330 K7EIL1 84 aa4.59□□□□□ -1.67
AC009404.1-201ENST00000420330 TRBV12-3P01733 135 aa4.59□□□□□ -1.67
AC009404.1-201ENST00000420330 C4orf48Q5BLP8 95 aa4.59□□□□□ -1.67
AC009404.1-201ENST00000420330 NDUFA12Q9UI09 145 aa4.59□□□□□ -1.67
AC009404.1-201ENST00000420330 TRBV6-5A0A0K0K1A5 114 aa4.59□□□□□ -1.68
AC009404.1-201ENST00000420330 VCYO14598 125 aa4.59□□□□□ -1.68
AC009404.1-201ENST00000420330 TIMM17BO60830 172 aa4.59□□□□□ -1.68
AC009404.1-201ENST00000420330 MED14OSP0DP75 135 aa4.59□□□□□ -1.68
AC009404.1-201ENST00000420330 RNASE4P34096 147 aaKnown RBP4.59□□□□□ -1.68
AC009404.1-201ENST00000420330 C4orf3Q8WVX3 66 aa4.59□□□□□ -1.68
AC009404.1-201ENST00000420330 VSIG2Q96IQ7 327 aa4.59□□□□□ -1.68
AC009404.1-201ENST00000420330 CCL24O00175 119 aa4.58□□□□□ -1.68
AC009404.1-201ENST00000420330 GNRH2O43555 120 aa4.58□□□□□ -1.68
AC009404.1-201ENST00000420330 PPP1R17O96001 155 aa4.58□□□□□ -1.68
AC009404.1-201ENST00000420330 NDPQ00604 133 aa4.58□□□□□ -1.68
AC009404.1-201ENST00000420330 KLKP1Q107X0 134 aa4.58□□□□□ -1.68
AC009404.1-201ENST00000420330 C9orf66Q5T8R8 295 aa4.58□□□□□ -1.68
AC009404.1-201ENST00000420330 Q9HAA7 133 aa4.58□□□□□ -1.68
AC009404.1-201ENST00000420330 TGP01266 2768 aa4.58□□□□□ -1.68
AC009404.1-201ENST00000420330 KRTAP10-11P60412 298 aa4.58□□□□□ -1.68
AC009404.1-201ENST00000420330 LCE2CQ5TA81 110 aa4.58□□□□□ -1.68
AC009404.1-201ENST00000420330 NPBQ8NG41 125 aa4.58□□□□□ -1.68
AC009404.1-201ENST00000420330 RNF5Q99942 180 aa4.58□□□□□ -1.68
AC009404.1-201ENST00000420330 C14orf132Q9NPU4 83 aa4.58□□□□□ -1.68
AC009404.1-201ENST00000420330 IGHV3-35A0A0C4DH35 117 aa4.57□□□□□ -1.68
AC009404.1-201ENST00000420330 C20orf203Q8NBC4 194 aa4.57□□□□□ -1.68
AC009404.1-201ENST00000420330 LINC00308Q8TCZ7 52 aa4.57□□□□□ -1.68
AC009404.1-201ENST00000420330 MRPL53Q96EL3 112 aaKnown RBP4.57□□□□□ -1.68
AC009404.1-201ENST00000420330 B9D2Q9BPU9 175 aa4.57□□□□□ -1.68
AC009404.1-201ENST00000420330 IGHV3-66A0A0C4DH42 116 aa4.57□□□□□ -1.68
AC009404.1-201ENST00000420330 C18orf65Q6ZTR6 163 aa4.57□□□□□ -1.68
AC009404.1-201ENST00000420330 ZNF625Q96I27 306 aaPredicted RBP4.57□□□□□ -1.68
AC009404.1-201ENST00000420330 UBE2E2Q96LR5 201 aa4.57□□□□□ -1.68
AC009404.1-201ENST00000420330 PHLDA3Q9Y5J5 127 aa4.57□□□□□ -1.68
AC009404.1-201ENST00000420330 BCE1O60756 84 aa4.57□□□□□ -1.68
AC009404.1-201ENST00000420330 HOXD3P31249 432 aaPredicted RBP4.57□□□□□ -1.68
AC009404.1-201ENST00000420330 SNRPD3P62318 126 aaKnown RBP4.57□□□□□ -1.68
AC009404.1-201ENST00000420330 PLAC8L1A1L4L8 177 aa4.56□□□□□ -1.68
AC009404.1-201ENST00000420330 IGLV1-40P01703 118 aa4.56□□□□□ -1.68
AC009404.1-201ENST00000420330 DEFB1P60022 68 aa4.56□□□□□ -1.68
AC009404.1-201ENST00000420330 FAM229BQ4G0N7 80 aa4.56□□□□□ -1.68
AC009404.1-201ENST00000420330 IGHV7-81A0A0B4J1V7 117 aa4.56□□□□□ -1.68
AC009404.1-201ENST00000420330 ATP6V0E1O15342 81 aa4.56□□□□□ -1.68
AC009404.1-201ENST00000420330 TRAV23DV6A0A075B6W5 121 aa4.55□□□□□ -1.68
AC009404.1-201ENST00000420330 A0A087WWL8 130 aa4.55□□□□□ -1.68
AC009404.1-201ENST00000420330 M0QY20 66 aa4.55□□□□□ -1.68
AC009404.1-201ENST00000420330 SOCS3O14543 225 aa4.55□□□□□ -1.68
AC009404.1-201ENST00000420330 PAX4O43316 350 aa4.55□□□□□ -1.68
AC009404.1-201ENST00000420330 DNAL4O96015 105 aa4.55□□□□□ -1.68
AC009404.1-201ENST00000420330 C19orf54Q5BKX5 351 aa4.55□□□□□ -1.68
AC009404.1-201ENST00000420330 LAMTOR3Q9UHA4 124 aa4.55□□□□□ -1.68
AC009404.1-201ENST00000420330 TRAV7A0A075B6U4 112 aa4.55□□□□□ -1.68
AC009404.1-201ENST00000420330 IGHV3OR16-13A0A075B7E8 117 aa4.55□□□□□ -1.68
AC009404.1-201ENST00000420330 IGHV3-74A0A0B4J1X5 117 aa4.55□□□□□ -1.68
AC009404.1-201ENST00000420330 IBA57-AS1B1ANH7 110 aa4.55□□□□□ -1.68
AC009404.1-201ENST00000420330 ATP5EP56381 51 aaPredicted RBP4.55□□□□□ -1.68
AC009404.1-201ENST00000420330 RPL11P62913 178 aaKnown RBP4.55□□□□□ -1.68
AC009404.1-201ENST00000420330 STHQ8IWL8 128 aa4.55□□□□□ -1.68
AC009404.1-201ENST00000420330 LENEPQ9Y5L5 61 aa4.55□□□□□ -1.68
AC009404.1-201ENST00000420330 A0A087WYN8 130 aa4.54□□□□□ -1.68
AC009404.1-201ENST00000420330 H3BUA1 57 aa4.54□□□□□ -1.68
AC009404.1-201ENST00000420330 NDUFA1O15239 70 aa4.54□□□□□ -1.68
AC009404.1-201ENST00000420330 RBM3P98179 157 aaKnown RBP4.54□□□□□ -1.68
AC009404.1-201ENST00000420330 DEFB136Q30KP8 78 aa4.54□□□□□ -1.68
AC009404.1-201ENST00000420330 TRAV21A0A0B4J279 112 aa4.54□□□□□ -1.68
AC009404.1-201ENST00000420330 WWC2-AS2Q96NR7 200 aa4.54□□□□□ -1.68
AC009404.1-201ENST00000420330 U3KQE9 123 aa4.54□□□□□ -1.68
AC009404.1-201ENST00000420330 G3V318 75 aa4.54□□□□□ -1.68
AC009404.1-201ENST00000420330 S100A4P26447 101 aaKnown RBP4.54□□□□□ -1.68
AC009404.1-201ENST00000420330 ECSCRQ19T08 205 aa4.54□□□□□ -1.68
AC009404.1-201ENST00000420330 RNASE13Q5GAN3 156 aaKnown RBP4.54□□□□□ -1.68
AC009404.1-201ENST00000420330 ATP5EP2Q5VTU8 51 aa4.54□□□□□ -1.68
AC009404.1-201ENST00000420330 F8WEM9 126 aa4.53□□□□□ -1.68
AC009404.1-201ENST00000420330 RMI2Q96E14 147 aa4.53□□□□□ -1.68
AC009404.1-201ENST00000420330 NOTCH3Q9UM47 2321 aa4.53□□□□□ -1.68
AC009404.1-201ENST00000420330 TRAV13-2A0A0B4J235 113 aa4.53□□□□□ -1.68
AC009404.1-201ENST00000420330 TRBV10-3A0A0K0K1G6 114 aa4.53□□□□□ -1.68
AC009404.1-201ENST00000420330 IGHV3-49A0A0A0MS15 119 aa4.52□□□□□ -1.69
AC009404.1-201ENST00000420330 NCR3O14931 201 aa4.52□□□□□ -1.69
AC009404.1-201ENST00000420330 IGLV5-45A0A087WSX0 123 aa4.52□□□□□ -1.69
AC009404.1-201ENST00000420330 NDUFC1O43677 76 aa4.52□□□□□ -1.69
AC009404.1-201ENST00000420330 CCDC140Q96MF4 163 aa4.52□□□□□ -1.69
AC009404.1-201ENST00000420330 IGKV2-29A2NJV5 120 aaPredicted RBP4.52□□□□□ -1.69
AC009404.1-201ENST00000420330 KLK9Q2XQG4 91 aa4.52□□□□□ -1.69
AC009404.1-201ENST00000420330 ENHOQ6UWT2 76 aa4.52□□□□□ -1.69
AC009404.1-201ENST00000420330 UNQ9165/PRO28630Q6UXU0 137 aa4.52□□□□□ -1.69
AC009404.1-201ENST00000420330 C6orf223Q8N319 242 aa4.52□□□□□ -1.69
AC009404.1-201ENST00000420330 C11orf72Q8NBR9 251 aa4.52□□□□□ -1.69
AC009404.1-201ENST00000420330 MPLKIPQ8TAP9 179 aa4.52□□□□□ -1.69
AC009404.1-201ENST00000420330 KLK9Q9UKQ9 250 aa4.52□□□□□ -1.69
AC009404.1-201ENST00000420330 DNAH9Q9NYC9 4486 aa4.52□□□□□ -1.69
AC009404.1-201ENST00000420330 IGKV2-28A0A075B6P5 120 aa4.51□□□□□ -1.69
AC009404.1-201ENST00000420330 IGLV5-39A0A0G2JS06 123 aa4.51□□□□□ -1.69
AC009404.1-201ENST00000420330 IGKV2D-28P01615 120 aa4.51□□□□□ -1.69
AC009404.1-201ENST00000420330 LINC00337Q8N6G1 96 aa4.51□□□□□ -1.69
AC009404.1-201ENST00000420330 CDKN2A-AS1Q9UH64 79 aa4.51□□□□□ -1.69
AC009404.1-201ENST00000420330 SNURFQ9Y675 71 aa4.51□□□□□ -1.69
AC009404.1-201ENST00000420330 F6UB75 175 aa4.5□□□□□ -1.69
AC009404.1-201ENST00000420330 SLURP1P55000 103 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms