RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 FAM168BA1KXE4 195 aa12.76□□□□□ -0.37
PKNOX1-202ENST00000418336 Q8IZM0 81 aa12.76□□□□□ -0.37
PKNOX1-202ENST00000418336 TINCRA0A1B0GVN0 87 aa12.75□□□□□ -0.37
PKNOX1-202ENST00000418336 SMIM1B2RUZ4 78 aa12.75□□□□□ -0.37
PKNOX1-202ENST00000418336 SEC11AP67812 179 aa12.75□□□□□ -0.37
PKNOX1-202ENST00000418336 LINC00614P0C842 121 aa12.74□□□□□ -0.37
PKNOX1-202ENST00000418336 SRSF9Q13242 221 aaKnown RBP eCLIP12.74□□□□□ -0.37
PKNOX1-202ENST00000418336 KRTAP11-1Q8IUC1 163 aa12.74□□□□□ -0.37
PKNOX1-202ENST00000418336 PDZD11Q5EBL8 140 aa12.73□□□□□ -0.37
PKNOX1-202ENST00000418336 PHF5AQ7RTV0 110 aaKnown RBP12.73□□□□□ -0.37
PKNOX1-202ENST00000418336 CBLN2Q8IUK8 224 aa12.73□□□□□ -0.37
PKNOX1-202ENST00000418336 PMVKQ15126 192 aa12.72□□□□□ -0.37
PKNOX1-202ENST00000418336 C9orf129Q5T035 196 aaKnown RBP12.72□□□□□ -0.37
PKNOX1-202ENST00000418336 SMCO4Q9NRQ5 59 aa12.72□□□□□ -0.37
PKNOX1-202ENST00000418336 NDUFC2-KCTD14E9PQ53 114 aa12.71□□□□□ -0.37
PKNOX1-202ENST00000418336 PMCHL1Q16048 86 aa12.71□□□□□ -0.37
PKNOX1-202ENST00000418336 GEMIN7Q9H840 131 aaKnown RBP12.71□□□□□ -0.37
PKNOX1-202ENST00000418336 SLC7A5P1Q8MH63 180 aa12.7□□□□□ -0.38
PKNOX1-202ENST00000418336 LINC00469Q8N7U9 141 aa12.7□□□□□ -0.38
PKNOX1-202ENST00000418336 TOMM7Q9P0U1 55 aa12.7□□□□□ -0.38
PKNOX1-202ENST00000418336 GAGE2EQ4V326 116 aa12.69□□□□□ -0.38
PKNOX1-202ENST00000418336 GAGE2DQ9UEU5 116 aa12.69□□□□□ -0.38
PKNOX1-202ENST00000418336 HBDP02042 147 aa12.68□□□□□ -0.38
PKNOX1-202ENST00000418336 IGLC3P0DOY3 106 aa12.68□□□□□ -0.38
PKNOX1-202ENST00000418336 C6orf226Q5I0X4 101 aa12.68□□□□□ -0.38
PKNOX1-202ENST00000418336 PSORS1C2Q9UIG4 136 aa12.68□□□□□ -0.38
PKNOX1-202ENST00000418336 PACRGQ96M98 296 aaPredicted RBP12.67□□□□□ -0.38
PKNOX1-202ENST00000418336 F8VRH5 84 aa12.66□□□□□ -0.38
PKNOX1-202ENST00000418336 PRSS2P07478 247 aa12.66□□□□□ -0.38
PKNOX1-202ENST00000418336 SPINK8P0C7L1 97 aa12.65□□□□□ -0.38
PKNOX1-202ENST00000418336 CKS1BP61024 79 aa12.65□□□□□ -0.38
PKNOX1-202ENST00000418336 SPINK6Q6UWN8 80 aa12.65□□□□□ -0.38
PKNOX1-202ENST00000418336 FAM19A5Q7Z5A7 132 aaPredicted RBP12.65□□□□□ -0.38
PKNOX1-202ENST00000418336 IGLV5-39A0A0G2JS06 123 aa12.64□□□□□ -0.39
PKNOX1-202ENST00000418336 COX7B2Q8TF08 81 aa12.64□□□□□ -0.39
PKNOX1-202ENST00000418336 ZNF22P17026 224 aaPredicted RBP12.63□□□□□ -0.39
PKNOX1-202ENST00000418336 CXCL5P42830 114 aa12.63□□□□□ -0.39
PKNOX1-202ENST00000418336 SERTAD4-AS1Q5TG53 156 aa12.63□□□□□ -0.39
PKNOX1-202ENST00000418336 LINC01600Q96MT4 127 aa12.63□□□□□ -0.39
PKNOX1-202ENST00000418336 RAB5BP61020 215 aa12.62□□□□□ -0.39
PKNOX1-202ENST00000418336 LINC00310P59036 64 aa12.61□□□□□ -0.39
PKNOX1-202ENST00000418336 CHCHD1Q96BP2 118 aaKnown RBP12.61□□□□□ -0.39
PKNOX1-202ENST00000418336 C11orf86A6NJI1 115 aa12.59□□□□□ -0.39
PKNOX1-202ENST00000418336 M0QXV9 152 aa12.59□□□□□ -0.39
PKNOX1-202ENST00000418336 ATP5LO75964 103 aa12.58□□□□□ -0.4
PKNOX1-202ENST00000418336 TRGC2P03986 189 aa12.58□□□□□ -0.4
PKNOX1-202ENST00000418336 ODF1Q14990 250 aa12.58□□□□□ -0.4
PKNOX1-202ENST00000418336 XAGE1AQ9HD64 81 aa12.58□□□□□ -0.4
PKNOX1-202ENST00000418336 UBR4Q5T4S7 5183 aa12.57□□□□□ -0.4
PKNOX1-202ENST00000418336 C1orf137Q5JT78 98 aa12.57□□□□□ -0.4
PKNOX1-202ENST00000418336 COLCA2A8K830 154 aa12.56□□□□□ -0.4
PKNOX1-202ENST00000418336 H3BRM9 83 aa12.56□□□□□ -0.4
PKNOX1-202ENST00000418336 IGLV7-43P04211 117 aa12.56□□□□□ -0.4
PKNOX1-202ENST00000418336 NDUFA6P56556 154 aa12.56□□□□□ -0.4
PKNOX1-202ENST00000418336 KRTAP10-8P60410 259 aa12.56□□□□□ -0.4
PKNOX1-202ENST00000418336 BAGE3Q86Y29 109 aa12.56□□□□□ -0.4
PKNOX1-202ENST00000418336 TRAV12-1A0A0B4J245 112 aa12.54□□□□□ -0.4
PKNOX1-202ENST00000418336 C22orf24Q9Y442 160 aa12.54□□□□□ -0.4
PKNOX1-202ENST00000418336 FAM19A2Q8N3H0 131 aa12.52□□□□□ -0.41
PKNOX1-202ENST00000418336 IFI27L1Q96BM0 104 aa12.52□□□□□ -0.41
PKNOX1-202ENST00000418336 PLA2G2DQ9UNK4 145 aa12.51□□□□□ -0.41
PKNOX1-202ENST00000418336 CHTOPQ9Y3Y2 248 aaKnown RBP12.51□□□□□ -0.41
PKNOX1-202ENST00000418336 NUPR1O60356 82 aa12.5□□□□□ -0.41
PKNOX1-202ENST00000418336 REG3GQ6UW15 175 aa12.5□□□□□ -0.41
PKNOX1-202ENST00000418336 ZNF625Q96I27 306 aaPredicted RBP12.5□□□□□ -0.41
PKNOX1-202ENST00000418336 TP73-AS1Q9UF72 201 aa12.5□□□□□ -0.41
PKNOX1-202ENST00000418336 IGLV5-37A0A075B6J1 123 aa12.49□□□□□ -0.41
PKNOX1-202ENST00000418336 TMEM223A0PJW6 202 aa12.48□□□□□ -0.41
PKNOX1-202ENST00000418336 SERF1AO75920 110 aa12.48□□□□□ -0.41
PKNOX1-202ENST00000418336 UBE2BP63146 152 aa12.47□□□□□ -0.41
PKNOX1-202ENST00000418336 TMEM170BQ5T4T1 132 aa12.47□□□□□ -0.41
PKNOX1-202ENST00000418336 HSBP1O75506 76 aa12.46□□□□□ -0.41
PKNOX1-202ENST00000418336 H0Y9J4 135 aa12.45□□□□□ -0.42
PKNOX1-202ENST00000418336 KRTAP1-4P0C5Y4 121 aa12.45□□□□□ -0.42
PKNOX1-202ENST00000418336 MRPL55Q7Z7F7 128 aaKnown RBP12.45□□□□□ -0.42
PKNOX1-202ENST00000418336 Q8NDZ9 215 aa12.45□□□□□ -0.42
PKNOX1-202ENST00000418336 ERG28Q9UKR5 140 aa12.45□□□□□ -0.42
PKNOX1-202ENST00000418336 LINC00167Q96N53 147 aa12.44□□□□□ -0.42
PKNOX1-202ENST00000418336 SCO1O75880 301 aa12.43□□□□□ -0.42
PKNOX1-202ENST00000418336 PFN2P35080 140 aa12.42□□□□□ -0.42
PKNOX1-202ENST00000418336 LBHQ53QV2 105 aaPredicted RBP12.42□□□□□ -0.42
PKNOX1-202ENST00000418336 DIRC1Q969H9 104 aa12.42□□□□□ -0.42
PKNOX1-202ENST00000418336 SND1-IT1Q9HBX3 110 aa12.42□□□□□ -0.42
PKNOX1-202ENST00000418336 COX17Q14061 63 aa12.41□□□□□ -0.42
PKNOX1-202ENST00000418336 LRP2P98164 4655 aa12.41□□□□□ -0.42
PKNOX1-202ENST00000418336 VPREB1P12018 145 aa12.4□□□□□ -0.42
PKNOX1-202ENST00000418336 LEPROTL1O95214 131 aa12.39□□□□□ -0.43
PKNOX1-202ENST00000418336 ZNF861PO60384 105 aa12.38□□□□□ -0.43
PKNOX1-202ENST00000418336 RPL37AP8A6NKH3 93 aa12.37□□□□□ -0.43
PKNOX1-202ENST00000418336 SFTA2Q6UW10 78 aa12.37□□□□□ -0.43
PKNOX1-202ENST00000418336 KRTAP13-1Q8IUC0 172 aa12.37□□□□□ -0.43
PKNOX1-202ENST00000418336 GAGE10A6NGK3 116 aa12.36□□□□□ -0.43
PKNOX1-202ENST00000418336 TSPEAR-AS2P59090 65 aa12.36□□□□□ -0.43
PKNOX1-202ENST00000418336 BCE1O60756 84 aa12.35□□□□□ -0.43
PKNOX1-202ENST00000418336 HIST1H2BKO60814 126 aa12.35□□□□□ -0.43
PKNOX1-202ENST00000418336 HIST1H2BJP06899 126 aa12.35□□□□□ -0.43
PKNOX1-202ENST00000418336 HIST1H2BOP23527 126 aa12.35□□□□□ -0.43
PKNOX1-202ENST00000418336 HIST1H2BBP33778 126 aa12.35□□□□□ -0.43
PKNOX1-202ENST00000418336 HIST1H2BDP58876 126 aa12.35□□□□□ -0.43
PKNOX1-202ENST00000418336 HIST1H2BCP62807 126 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms