RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 TENM3Q9P273 2699 aa10.59□□□□□ -0.71
LRCH3-202ENST00000414675 XCL1P47992 114 aa10.58□□□□□ -0.72
LRCH3-202ENST00000414675 COPS9Q8WXC6 57 aa10.58□□□□□ -0.72
LRCH3-202ENST00000414675 COL6A5A8TX70 2615 aa10.58□□□□□ -0.72
LRCH3-202ENST00000414675 HERV-K104P63124 156 aa10.58□□□□□ -0.72
LRCH3-202ENST00000414675 SHISA2Q6UWI4 295 aa10.57□□□□□ -0.72
LRCH3-202ENST00000414675 CDIP1Q9H305 208 aa10.56□□□□□ -0.72
LRCH3-202ENST00000414675 NOTCH1P46531 2555 aa10.56□□□□□ -0.72
LRCH3-202ENST00000414675 TRBV10-2A0A0K0K1G8 114 aa10.56□□□□□ -0.72
LRCH3-202ENST00000414675 LINC00269Q8N2A0 174 aa10.56□□□□□ -0.72
LRCH3-202ENST00000414675 SS18Q15532 418 aa10.55□□□□□ -0.72
LRCH3-202ENST00000414675 MRPL23Q16540 153 aaKnown RBP10.55□□□□□ -0.72
LRCH3-202ENST00000414675 NTN5Q8WTR8 489 aaPredicted RBP10.55□□□□□ -0.72
LRCH3-202ENST00000414675 CLEC2BQ92478 149 aa10.55□□□□□ -0.72
LRCH3-202ENST00000414675 C2orf82Q6UX34 121 aa10.53□□□□□ -0.72
LRCH3-202ENST00000414675 ANGP03950 147 aaKnown RBP10.53□□□□□ -0.72
LRCH3-202ENST00000414675 C11orf68Q9H3H3 251 aaKnown RBP10.52□□□□□ -0.73
LRCH3-202ENST00000414675 IGLV10-54A0A075B6I4 117 aa10.51□□□□□ -0.73
LRCH3-202ENST00000414675 LST1O00453 97 aa10.51□□□□□ -0.73
LRCH3-202ENST00000414675 MIR7-3HGQ8N6C7 128 aa10.51□□□□□ -0.73
LRCH3-202ENST00000414675 REG3AQ06141 175 aa10.51□□□□□ -0.73
LRCH3-202ENST00000414675 LELP1Q5T871 98 aa10.51□□□□□ -0.73
LRCH3-202ENST00000414675 UBE2WQ96B02 151 aa10.51□□□□□ -0.73
LRCH3-202ENST00000414675 H3BT86 120 aa10.5□□□□□ -0.73
LRCH3-202ENST00000414675 MT-ATP8P03928 68 aa10.5□□□□□ -0.73
LRCH3-202ENST00000414675 XGP55808 180 aa10.5□□□□□ -0.73
LRCH3-202ENST00000414675 CHCHD10Q8WYQ3 142 aaPredicted RBP10.5□□□□□ -0.73
LRCH3-202ENST00000414675 LINC01600Q96MT4 127 aa10.5□□□□□ -0.73
LRCH3-202ENST00000414675 TEX49A0A1B0GTD5 131 aa10.49□□□□□ -0.73
LRCH3-202ENST00000414675 LINC00158P58513 81 aa10.49□□□□□ -0.73
LRCH3-202ENST00000414675 Q6ZTC4 211 aa10.49□□□□□ -0.73
LRCH3-202ENST00000414675 C6orf226Q5I0X4 101 aa10.48□□□□□ -0.73
LRCH3-202ENST00000414675 CD164L2Q6UWJ8 174 aa10.48□□□□□ -0.73
LRCH3-202ENST00000414675 LYPD5Q6UWN5 251 aa10.48□□□□□ -0.73
LRCH3-202ENST00000414675 NBEAL1Q6ZS30 2694 aa10.48□□□□□ -0.73
LRCH3-202ENST00000414675 IBA57-AS1B1ANH7 110 aa10.47□□□□□ -0.73
LRCH3-202ENST00000414675 PFN2P35080 140 aa10.47□□□□□ -0.73
LRCH3-202ENST00000414675 Q8IZM0 81 aa10.47□□□□□ -0.73
LRCH3-202ENST00000414675 PPDPFQ9H3Y8 114 aa10.47□□□□□ -0.73
LRCH3-202ENST00000414675 LINC01561Q8N1V8 128 aa10.46□□□□□ -0.73
LRCH3-202ENST00000414675 TRAV8-4A0A0B4J246 113 aa10.46□□□□□ -0.74
LRCH3-202ENST00000414675 COX7A2LO14548 114 aa10.46□□□□□ -0.74
LRCH3-202ENST00000414675 KIAA0087Q14695 138 aa10.46□□□□□ -0.74
LRCH3-202ENST00000414675 A0A0J9YWU9 116 aa10.45□□□□□ -0.74
LRCH3-202ENST00000414675 CCL18P55774 89 aa10.45□□□□□ -0.74
LRCH3-202ENST00000414675 KPRPQ5T749 579 aaPredicted RBP10.45□□□□□ -0.74
LRCH3-202ENST00000414675 PRB2P02812 416 aaPredicted RBP10.45□□□□□ -0.74
LRCH3-202ENST00000414675 KLK12Q9UKR0 248 aa10.45□□□□□ -0.74
LRCH3-202ENST00000414675 IGKV2-28A0A075B6P5 120 aa10.44□□□□□ -0.74
LRCH3-202ENST00000414675 IGKV2D-28P01615 120 aa10.44□□□□□ -0.74
LRCH3-202ENST00000414675 SND1-IT1Q9HBX3 110 aa10.44□□□□□ -0.74
LRCH3-202ENST00000414675 A0A1B0GV72 72 aa10.44□□□□□ -0.74
LRCH3-202ENST00000414675 NANOS2P60321 138 aaKnown RBP10.43□□□□□ -0.74
LRCH3-202ENST00000414675 LINC00337Q8N6G1 96 aa10.43□□□□□ -0.74
LRCH3-202ENST00000414675 PRR34Q9NV39 138 aa10.43□□□□□ -0.74
LRCH3-202ENST00000414675 TRAV13-2A0A0B4J235 113 aa10.42□□□□□ -0.74
LRCH3-202ENST00000414675 CRPP02741 224 aa10.42□□□□□ -0.74
LRCH3-202ENST00000414675 ENHOQ6UWT2 76 aa10.42□□□□□ -0.74
LRCH3-202ENST00000414675 H3BNG1 76 aa10.41□□□□□ -0.74
LRCH3-202ENST00000414675 MALP21145 153 aa10.41□□□□□ -0.74
LRCH3-202ENST00000414675 CKS1BP61024 79 aa10.41□□□□□ -0.74
LRCH3-202ENST00000414675 WFDC10BQ8IUB3 73 aa10.41□□□□□ -0.74
LRCH3-202ENST00000414675 SNCGO76070 127 aa10.4□□□□□ -0.75
LRCH3-202ENST00000414675 CFAP161Q6P656 301 aa10.39□□□□□ -0.75
LRCH3-202ENST00000414675 MDFIQ99750 246 aa10.39□□□□□ -0.75
LRCH3-202ENST00000414675 C9orf116Q5BN46 136 aaPredicted RBP10.38□□□□□ -0.75
LRCH3-202ENST00000414675 HUWE1Q7Z6Z7 4374 aaKnown RBP10.38□□□□□ -0.75
LRCH3-202ENST00000414675 C6orf223Q8N319 242 aa10.38□□□□□ -0.75
LRCH3-202ENST00000414675 C11orf45Q8TAV5 145 aa10.38□□□□□ -0.75
LRCH3-202ENST00000414675 LINC00526Q96FQ7 95 aa10.38□□□□□ -0.75
LRCH3-202ENST00000414675 MGAM2Q2M2H8 2515 aa10.38□□□□□ -0.75
LRCH3-202ENST00000414675 TRACP01848 142 aa10.37□□□□□ -0.75
LRCH3-202ENST00000414675 ESRGQ1W209 222 aa10.37□□□□□ -0.75
LRCH3-202ENST00000414675 DEFB131BA0A096LNP1 70 aa10.37□□□□□ -0.75
LRCH3-202ENST00000414675 RPL28P46779 137 aaKnown RBP10.36□□□□□ -0.75
LRCH3-202ENST00000414675 C10orf25Q5T742 122 aa10.36□□□□□ -0.75
LRCH3-202ENST00000414675 CXCL5P42830 114 aa10.36□□□□□ -0.75
LRCH3-202ENST00000414675 DEFB121Q5J5C9 76 aa10.36□□□□□ -0.75
LRCH3-202ENST00000414675 KLK5Q9Y337 293 aaPredicted RBP10.36□□□□□ -0.75
LRCH3-202ENST00000414675 K7EIL1 84 aa10.35□□□□□ -0.75
LRCH3-202ENST00000414675 SPAG11BQ08648 103 aa10.35□□□□□ -0.75
LRCH3-202ENST00000414675 FAM218AQ96MZ4 157 aa10.35□□□□□ -0.75
LRCH3-202ENST00000414675 UNQ6190/PRO20217Q6UXQ8 127 aa10.35□□□□□ -0.75
LRCH3-202ENST00000414675 C15orf53Q8NAA6 179 aa10.34□□□□□ -0.75
LRCH3-202ENST00000414675 SMIM11BQ8TCY0 68 aa10.34□□□□□ -0.75
LRCH3-202ENST00000414675 BAALC-AS2P0C853 105 aa10.33□□□□□ -0.76
LRCH3-202ENST00000414675 GAGE2BQ13066 116 aa10.33□□□□□ -0.76
LRCH3-202ENST00000414675 GAGE2EQ4V326 116 aa10.33□□□□□ -0.76
LRCH3-202ENST00000414675 MRAPQ8TCY5 172 aa10.33□□□□□ -0.76
LRCH3-202ENST00000414675 GAGE2DQ9UEU5 116 aa10.33□□□□□ -0.76
LRCH3-202ENST00000414675 FAM240AA0A1B0GVK7 77 aa10.32□□□□□ -0.76
LRCH3-202ENST00000414675 PRR3P79522 188 aaKnown RBP10.32□□□□□ -0.76
LRCH3-202ENST00000414675 COX17Q14061 63 aa10.32□□□□□ -0.76
LRCH3-202ENST00000414675 KRTAP26-1Q6PEX3 210 aa10.32□□□□□ -0.76
LRCH3-202ENST00000414675 OR13C6PQ8NH95 151 aa10.32□□□□□ -0.76
LRCH3-202ENST00000414675 Q8NDZ9 215 aa10.31□□□□□ -0.76
LRCH3-202ENST00000414675 TM2D3Q9BRN9 247 aa10.31□□□□□ -0.76
LRCH3-202ENST00000414675 Q9HAA7 133 aa10.31□□□□□ -0.76
LRCH3-202ENST00000414675 DNAL4O96015 105 aa10.3□□□□□ -0.76
LRCH3-202ENST00000414675 TTC32Q5I0X7 151 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 390.3 ms