RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 PMVKQ15126 192 aa6.99□□□□□ -1.29
RFFL-204ENST00000414419 Q8IZM0 81 aa6.99□□□□□ -1.29
RFFL-204ENST00000414419 TINCRA0A1B0GVN0 87 aa6.98□□□□□ -1.29
RFFL-204ENST00000414419 NDUFC2-KCTD14E9PQ53 114 aa6.98□□□□□ -1.29
RFFL-204ENST00000414419 RAB5BP61020 215 aa6.98□□□□□ -1.29
RFFL-204ENST00000414419 C18orf32Q8TCD1 76 aa6.98□□□□□ -1.29
RFFL-204ENST00000414419 CST9LQ9H4G1 147 aa6.98□□□□□ -1.29
RFFL-204ENST00000414419 NDUFA6P56556 154 aa6.97□□□□□ -1.29
RFFL-204ENST00000414419 PHF5AQ7RTV0 110 aaKnown RBP6.97□□□□□ -1.29
RFFL-204ENST00000414419 SLC7A5P1Q8MH63 180 aa6.97□□□□□ -1.29
RFFL-204ENST00000414419 HBDP02042 147 aa6.96□□□□□ -1.3
RFFL-204ENST00000414419 CXCL5P42830 114 aa6.96□□□□□ -1.3
RFFL-204ENST00000414419 SPINK6Q6UWN8 80 aa6.96□□□□□ -1.3
RFFL-204ENST00000414419 FAM19A5Q7Z5A7 132 aaPredicted RBP6.96□□□□□ -1.3
RFFL-204ENST00000414419 HERC1Q15751 4861 aa6.96□□□□□ -1.3
RFFL-204ENST00000414419 PKHD1L1Q86WI1 4243 aa6.95□□□□□ -1.3
RFFL-204ENST00000414419 FAM168BA1KXE4 195 aa6.95□□□□□ -1.3
RFFL-204ENST00000414419 F8VRH5 84 aa6.95□□□□□ -1.3
RFFL-204ENST00000414419 H3BRM9 83 aa6.95□□□□□ -1.3
RFFL-204ENST00000414419 PDZD11Q5EBL8 140 aa6.95□□□□□ -1.3
RFFL-204ENST00000414419 SERTAD4-AS1Q5TG53 156 aa6.95□□□□□ -1.3
RFFL-204ENST00000414419 COX7B2Q8TF08 81 aa6.95□□□□□ -1.3
RFFL-204ENST00000414419 LRP1Q07954 4544 aaKnown RBP6.95□□□□□ -1.3
RFFL-204ENST00000414419 IGLV5-45A0A087WSX0 123 aa6.94□□□□□ -1.3
RFFL-204ENST00000414419 SMIM1B2RUZ4 78 aa6.94□□□□□ -1.3
RFFL-204ENST00000414419 ATP5LO75964 103 aa6.94□□□□□ -1.3
RFFL-204ENST00000414419 PMCHL1Q16048 86 aa6.94□□□□□ -1.3
RFFL-204ENST00000414419 C1orf137Q5JT78 98 aa6.94□□□□□ -1.3
RFFL-204ENST00000414419 REG3GQ6UW15 175 aa6.94□□□□□ -1.3
RFFL-204ENST00000414419 URB1-AS1Q96HZ7 61 aa6.94□□□□□ -1.3
RFFL-204ENST00000414419 PSORS1C2Q9UIG4 136 aa6.94□□□□□ -1.3
RFFL-204ENST00000414419 SPINK8P0C7L1 97 aa6.93□□□□□ -1.3
RFFL-204ENST00000414419 UBE2BP63146 152 aa6.93□□□□□ -1.3
RFFL-204ENST00000414419 A0A096LNJ9 63 aa6.92□□□□□ -1.3
RFFL-204ENST00000414419 M0QXV9 152 aa6.92□□□□□ -1.3
RFFL-204ENST00000414419 IGLC3P0DOY3 106 aa6.92□□□□□ -1.3
RFFL-204ENST00000414419 C9orf129Q5T035 196 aaKnown RBP6.92□□□□□ -1.3
RFFL-204ENST00000414419 SRSF9Q13242 221 aaKnown RBP eCLIP6.91□□□□□ -1.3
RFFL-204ENST00000414419 BAGE3Q86Y29 109 aa6.91□□□□□ -1.3
RFFL-204ENST00000414419 CBLN2Q8IUK8 224 aa6.91□□□□□ -1.3
RFFL-204ENST00000414419 CHCHD1Q96BP2 118 aaKnown RBP6.91□□□□□ -1.3
RFFL-204ENST00000414419 YPEL4Q96NS1 127 aa6.91□□□□□ -1.3
RFFL-204ENST00000414419 XAGE1AQ9HD64 81 aa6.91□□□□□ -1.3
RFFL-204ENST00000414419 FAT3Q8TDW7 4589 aa6.91□□□□□ -1.3
RFFL-204ENST00000414419 LINC01600Q96MT4 127 aa6.9□□□□□ -1.3
RFFL-204ENST00000414419 MT1HL1P0DM35 61 aa6.89□□□□□ -1.31
RFFL-204ENST00000414419 ZNF22P17026 224 aaPredicted RBP6.89□□□□□ -1.31
RFFL-204ENST00000414419 LBHQ53QV2 105 aaPredicted RBP6.89□□□□□ -1.31
RFFL-204ENST00000414419 TMEM170BQ5T4T1 132 aa6.89□□□□□ -1.31
RFFL-204ENST00000414419 HSBP1O75506 76 aa6.88□□□□□ -1.31
RFFL-204ENST00000414419 IGLV7-43P04211 117 aa6.88□□□□□ -1.31
RFFL-204ENST00000414419 KRTAP7-1Q8IUC3 87 aa6.88□□□□□ -1.31
RFFL-204ENST00000414419 CHTOPQ9Y3Y2 248 aaKnown RBP6.88□□□□□ -1.31
RFFL-204ENST00000414419 TRGC2P03986 189 aa6.87□□□□□ -1.31
RFFL-204ENST00000414419 DIRC1Q969H9 104 aa6.87□□□□□ -1.31
RFFL-204ENST00000414419 IFI27L1Q96BM0 104 aa6.87□□□□□ -1.31
RFFL-204ENST00000414419 PLA2G2DQ9UNK4 145 aa6.87□□□□□ -1.31
RFFL-204ENST00000414419 C22orf24Q9Y442 160 aa6.87□□□□□ -1.31
RFFL-204ENST00000414419 IGLV5-39A0A0G2JS06 123 aa6.86□□□□□ -1.31
RFFL-204ENST00000414419 C11orf86A6NJI1 115 aa6.86□□□□□ -1.31
RFFL-204ENST00000414419 KRTAP11-1Q8IUC1 163 aa6.86□□□□□ -1.31
RFFL-204ENST00000414419 TRAV12-1A0A0B4J245 112 aa6.85□□□□□ -1.31
RFFL-204ENST00000414419 PFN2P35080 140 aa6.85□□□□□ -1.31
RFFL-204ENST00000414419 SFTA2Q6UW10 78 aa6.85□□□□□ -1.31
RFFL-204ENST00000414419 MRPL55Q7Z7F7 128 aaKnown RBP6.85□□□□□ -1.31
RFFL-204ENST00000414419 TP73-AS1Q9UF72 201 aa6.85□□□□□ -1.31
RFFL-204ENST00000414419 LOC105371267A0A1B0GV96 52 aa6.84□□□□□ -1.31
RFFL-204ENST00000414419 NUPR1O60356 82 aa6.84□□□□□ -1.31
RFFL-204ENST00000414419 FAM19A2Q8N3H0 131 aa6.84□□□□□ -1.31
RFFL-204ENST00000414419 NKAPP1Q8N9T2 125 aa6.84□□□□□ -1.31
RFFL-204ENST00000414419 ODF1Q14990 250 aa6.83□□□□□ -1.32
RFFL-204ENST00000414419 ZNF625Q96I27 306 aaPredicted RBP6.83□□□□□ -1.32
RFFL-204ENST00000414419 ERG28Q9UKR5 140 aa6.83□□□□□ -1.32
RFFL-204ENST00000414419 H0Y8G0 127 aa6.82□□□□□ -1.32
RFFL-204ENST00000414419 H0Y9J4 135 aa6.82□□□□□ -1.32
RFFL-204ENST00000414419 SERF1AO75920 110 aa6.82□□□□□ -1.32
RFFL-204ENST00000414419 LEPROTL1O95214 131 aa6.82□□□□□ -1.32
RFFL-204ENST00000414419 KRTAP10-8P60410 259 aa6.82□□□□□ -1.32
RFFL-204ENST00000414419 COX17Q14061 63 aa6.82□□□□□ -1.32
RFFL-204ENST00000414419 TMEM223A0PJW6 202 aa6.81□□□□□ -1.32
RFFL-204ENST00000414419 RPL37AP8A6NKH3 93 aa6.81□□□□□ -1.32
RFFL-204ENST00000414419 LINC00167Q96N53 147 aa6.81□□□□□ -1.32
RFFL-204ENST00000414419 GAGE10A6NGK3 116 aa6.8□□□□□ -1.32
RFFL-204ENST00000414419 COLCA2A8K830 154 aa6.8□□□□□ -1.32
RFFL-204ENST00000414419 ZNF861PO60384 105 aa6.8□□□□□ -1.32
RFFL-204ENST00000414419 RPL24P83731 157 aaKnown RBP6.8□□□□□ -1.32
RFFL-204ENST00000414419 HSPB8Q9UJY1 196 aa6.8□□□□□ -1.32
RFFL-204ENST00000414419 TMA7Q9Y2S6 64 aaKnown RBP6.8□□□□□ -1.32
RFFL-204ENST00000414419 IGLV5-37A0A075B6J1 123 aa6.79□□□□□ -1.32
RFFL-204ENST00000414419 LINC00158P58513 81 aa6.79□□□□□ -1.32
RFFL-204ENST00000414419 SND1-IT1Q9HBX3 110 aa6.79□□□□□ -1.32
RFFL-204ENST00000414419 BCE1O60756 84 aa6.78□□□□□ -1.32
RFFL-204ENST00000414419 FABP4P15090 132 aa6.78□□□□□ -1.32
RFFL-204ENST00000414419 RPL28P46779 137 aaKnown RBP6.78□□□□□ -1.32
RFFL-204ENST00000414419 A0A0U1RRA0 63 aa6.77□□□□□ -1.33
RFFL-204ENST00000414419 MEIG1Q5JSS6 88 aa6.77□□□□□ -1.33
RFFL-204ENST00000414419 PRR26Q8N8Z3 221 aa6.77□□□□□ -1.33
RFFL-204ENST00000414419 IGLV1-50A0A075B6I6 118 aa6.76□□□□□ -1.33
RFFL-204ENST00000414419 IGKV2-28A0A075B6P5 120 aa6.76□□□□□ -1.33
RFFL-204ENST00000414419 LINC00587B1AMM8 73 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms