RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 TINCRA0A1B0GVN0 87 aa6.34□□□□□ -1.39
TMEM248-202ENST00000413593 RPL18AQ02543 176 aaKnown RBP6.34□□□□□ -1.39
TMEM248-202ENST00000413593 PMCHL1Q16048 86 aa6.34□□□□□ -1.39
TMEM248-202ENST00000413593 C2orf82Q6UX34 121 aa6.34□□□□□ -1.39
TMEM248-202ENST00000413593 C6orf48Q9UBA6 75 aa6.34□□□□□ -1.39
TMEM248-202ENST00000413593 MYCBP2O75592 4640 aa6.33□□□□□ -1.4
TMEM248-202ENST00000413593 IGLV5-45A0A087WSX0 123 aa6.33□□□□□ -1.4
TMEM248-202ENST00000413593 PDZD11Q5EBL8 140 aa6.33□□□□□ -1.4
TMEM248-202ENST00000413593 XP32Q5T750 250 aa6.33□□□□□ -1.4
TMEM248-202ENST00000413593 LINC00469Q8N7U9 141 aa6.33□□□□□ -1.4
TMEM248-202ENST00000413593 PACRGQ96M98 296 aaPredicted RBP6.33□□□□□ -1.4
TMEM248-202ENST00000413593 TRBV30A0A0K0K1B3 111 aa6.32□□□□□ -1.4
TMEM248-202ENST00000413593 SMIM1B2RUZ4 78 aa6.32□□□□□ -1.4
TMEM248-202ENST00000413593 TRGC2P03986 189 aa6.32□□□□□ -1.4
TMEM248-202ENST00000413593 PRSS2P07478 247 aa6.32□□□□□ -1.4
TMEM248-202ENST00000413593 TLX1NBP0CAT3 122 aa6.32□□□□□ -1.4
TMEM248-202ENST00000413593 Q8IZM0 81 aa6.32□□□□□ -1.4
TMEM248-202ENST00000413593 C7orf33Q8WU49 177 aa6.32□□□□□ -1.4
TMEM248-202ENST00000413593 CHCHD1Q96BP2 118 aaKnown RBP6.32□□□□□ -1.4
TMEM248-202ENST00000413593 TOMM7Q9P0U1 55 aa6.32□□□□□ -1.4
TMEM248-202ENST00000413593 COLCA2A8K830 154 aa6.31□□□□□ -1.4
TMEM248-202ENST00000413593 ATP5LO75964 103 aa6.31□□□□□ -1.4
TMEM248-202ENST00000413593 HNRNPA3P51991 378 aaKnown RBP6.31□□□□□ -1.4
TMEM248-202ENST00000413593 C6orf226Q5I0X4 101 aa6.31□□□□□ -1.4
TMEM248-202ENST00000413593 Q6ZRP5 223 aa6.31□□□□□ -1.4
TMEM248-202ENST00000413593 DMBT1Q9UGM3 2413 aaPredicted RBP6.31□□□□□ -1.4
TMEM248-202ENST00000413593 A0A1W2PNN7 141 aa6.3□□□□□ -1.4
TMEM248-202ENST00000413593 IGLC3P0DOY3 106 aa6.3□□□□□ -1.4
TMEM248-202ENST00000413593 NDUFA6P56556 154 aa6.3□□□□□ -1.4
TMEM248-202ENST00000413593 CKS1BP61024 79 aa6.3□□□□□ -1.4
TMEM248-202ENST00000413593 C9orf116Q5BN46 136 aaPredicted RBP6.3□□□□□ -1.4
TMEM248-202ENST00000413593 NDUFC2-KCTD14E9PQ53 114 aa6.29□□□□□ -1.4
TMEM248-202ENST00000413593 SPINK8P0C7L1 97 aa6.29□□□□□ -1.4
TMEM248-202ENST00000413593 CXCL5P42830 114 aa6.29□□□□□ -1.4
TMEM248-202ENST00000413593 GAGE2EQ4V326 116 aa6.29□□□□□ -1.4
TMEM248-202ENST00000413593 BAGE3Q86Y29 109 aa6.29□□□□□ -1.4
TMEM248-202ENST00000413593 COX7B2Q8TF08 81 aa6.29□□□□□ -1.4
TMEM248-202ENST00000413593 GAGE2DQ9UEU5 116 aa6.29□□□□□ -1.4
TMEM248-202ENST00000413593 F8VRH5 84 aa6.28□□□□□ -1.4
TMEM248-202ENST00000413593 H3BRM9 83 aa6.28□□□□□ -1.4
TMEM248-202ENST00000413593 HSBP1O75506 76 aa6.28□□□□□ -1.4
TMEM248-202ENST00000413593 PRR3P79522 188 aaKnown RBP6.28□□□□□ -1.4
TMEM248-202ENST00000413593 FAM168BA1KXE4 195 aa6.27□□□□□ -1.41
TMEM248-202ENST00000413593 C11orf86A6NJI1 115 aa6.27□□□□□ -1.41
TMEM248-202ENST00000413593 SCO1O75880 301 aa6.27□□□□□ -1.41
TMEM248-202ENST00000413593 SERF1AO75920 110 aa6.27□□□□□ -1.41
TMEM248-202ENST00000413593 ZNF22P17026 224 aaPredicted RBP6.27□□□□□ -1.41
TMEM248-202ENST00000413593 LINC00310P59036 64 aa6.27□□□□□ -1.41
TMEM248-202ENST00000413593 FAM19A2Q8N3H0 131 aa6.27□□□□□ -1.41
TMEM248-202ENST00000413593 IFI27L1Q96BM0 104 aa6.27□□□□□ -1.41
TMEM248-202ENST00000413593 HERC1Q15751 4861 aa6.26□□□□□ -1.41
TMEM248-202ENST00000413593 IGLV5-39A0A0G2JS06 123 aa6.26□□□□□ -1.41
TMEM248-202ENST00000413593 KRTAP29-1A8MX34 341 aaPredicted RBP6.26□□□□□ -1.41
TMEM248-202ENST00000413593 C9orf129Q5T035 196 aaKnown RBP6.26□□□□□ -1.41
TMEM248-202ENST00000413593 KRTAP7-1Q8IUC3 87 aa6.26□□□□□ -1.41
TMEM248-202ENST00000413593 TRAV12-1A0A0B4J245 112 aa6.25□□□□□ -1.41
TMEM248-202ENST00000413593 PHF5AQ7RTV0 110 aaKnown RBP6.25□□□□□ -1.41
TMEM248-202ENST00000413593 FAM19A5Q7Z5A7 132 aaPredicted RBP6.25□□□□□ -1.41
TMEM248-202ENST00000413593 CHTOPQ9Y3Y2 248 aaKnown RBP6.25□□□□□ -1.41
TMEM248-202ENST00000413593 OXTP01178 125 aa6.24□□□□□ -1.41
TMEM248-202ENST00000413593 TMEM170BQ5T4T1 132 aa6.24□□□□□ -1.41
TMEM248-202ENST00000413593 LRP1Q07954 4544 aaKnown RBP6.24□□□□□ -1.41
TMEM248-202ENST00000413593 NUPR1O60356 82 aa6.23□□□□□ -1.41
TMEM248-202ENST00000413593 XAGE1AQ9HD64 81 aa6.23□□□□□ -1.41
TMEM248-202ENST00000413593 PSORS1C2Q9UIG4 136 aa6.23□□□□□ -1.41
TMEM248-202ENST00000413593 PKHD1L1Q86WI1 4243 aa6.23□□□□□ -1.41
TMEM248-202ENST00000413593 M0QXV9 152 aa6.22□□□□□ -1.41
TMEM248-202ENST00000413593 LEPROTL1O95214 131 aa6.22□□□□□ -1.41
TMEM248-202ENST00000413593 FAT3Q8TDW7 4589 aa6.21□□□□□ -1.41
TMEM248-202ENST00000413593 HIST1H2BKO60814 126 aa6.21□□□□□ -1.42
TMEM248-202ENST00000413593 HIST1H2BJP06899 126 aa6.21□□□□□ -1.42
TMEM248-202ENST00000413593 HIST1H2BOP23527 126 aa6.21□□□□□ -1.42
TMEM248-202ENST00000413593 HIST1H2BBP33778 126 aa6.21□□□□□ -1.42
TMEM248-202ENST00000413593 HIST1H2BDP58876 126 aa6.21□□□□□ -1.42
TMEM248-202ENST00000413593 HIST1H2BCP62807 126 aa6.21□□□□□ -1.42
TMEM248-202ENST00000413593 ODF1Q14990 250 aa6.21□□□□□ -1.42
TMEM248-202ENST00000413593 HIST2H2BEQ16778 126 aa6.21□□□□□ -1.42
TMEM248-202ENST00000413593 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.21□□□□□ -1.42
TMEM248-202ENST00000413593 SERTAD4-AS1Q5TG53 156 aa6.21□□□□□ -1.42
TMEM248-202ENST00000413593 KRTAP11-1Q8IUC1 163 aa6.21□□□□□ -1.42
TMEM248-202ENST00000413593 HIST1H2BHQ93079 126 aa6.21□□□□□ -1.42
TMEM248-202ENST00000413593 HIST1H2BNQ99877 126 aa6.21□□□□□ -1.42
TMEM248-202ENST00000413593 HIST1H2BMQ99879 126 aa6.21□□□□□ -1.42
TMEM248-202ENST00000413593 TMEM223A0PJW6 202 aa6.2□□□□□ -1.42
TMEM248-202ENST00000413593 H0Y8G0 127 aa6.2□□□□□ -1.42
TMEM248-202ENST00000413593 FABP4P15090 132 aa6.2□□□□□ -1.42
TMEM248-202ENST00000413593 SRSF9Q13242 221 aaKnown RBP eCLIP6.2□□□□□ -1.42
TMEM248-202ENST00000413593 SPINK6Q6UWN8 80 aa6.2□□□□□ -1.42
TMEM248-202ENST00000413593 HSPB8Q9UJY1 196 aa6.2□□□□□ -1.42
TMEM248-202ENST00000413593 UBE2BP63146 152 aa6.19□□□□□ -1.42
TMEM248-202ENST00000413593 C1orf137Q5JT78 98 aa6.19□□□□□ -1.42
TMEM248-202ENST00000413593 SFTA2Q6UW10 78 aa6.19□□□□□ -1.42
TMEM248-202ENST00000413593 ZNF625Q96I27 306 aaPredicted RBP6.19□□□□□ -1.42
TMEM248-202ENST00000413593 C22orf24Q9Y442 160 aa6.19□□□□□ -1.42
TMEM248-202ENST00000413593 PFN2P35080 140 aa6.18□□□□□ -1.42
TMEM248-202ENST00000413593 ERG28Q9UKR5 140 aa6.18□□□□□ -1.42
TMEM248-202ENST00000413593 IGLV7-43P04211 117 aa6.17□□□□□ -1.42
TMEM248-202ENST00000413593 MT1HL1P0DM35 61 aa6.17□□□□□ -1.42
TMEM248-202ENST00000413593 PLNP26678 52 aa6.17□□□□□ -1.42
TMEM248-202ENST00000413593 COX17Q14061 63 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 168.3 ms