RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 C9orf116Q5BN46 136 aaPredicted RBP8.24□□□□□ -1.09
SSB-203ENST00000413002 LINC00469Q8N7U9 141 aa8.24□□□□□ -1.09
SSB-203ENST00000413002 PKIGQ9Y2B9 76 aa8.24□□□□□ -1.09
SSB-203ENST00000413002 PRSS2P07478 247 aa8.23□□□□□ -1.09
SSB-203ENST00000413002 PMVKQ15126 192 aa8.23□□□□□ -1.09
SSB-203ENST00000413002 Q6ZRP5 223 aa8.23□□□□□ -1.09
SSB-203ENST00000413002 C7orf33Q8WU49 177 aa8.23□□□□□ -1.09
SSB-203ENST00000413002 HERC1Q15751 4861 aa8.22□□□□□ -1.09
SSB-203ENST00000413002 F8WDY8 70 aa8.22□□□□□ -1.09
SSB-203ENST00000413002 SEC11AP67812 179 aa8.22□□□□□ -1.09
SSB-203ENST00000413002 GAGE2EQ4V326 116 aa8.22□□□□□ -1.09
SSB-203ENST00000413002 C6orf226Q5I0X4 101 aa8.22□□□□□ -1.09
SSB-203ENST00000413002 LINC01561Q8N1V8 128 aa8.22□□□□□ -1.09
SSB-203ENST00000413002 PACRGQ96M98 296 aaPredicted RBP8.22□□□□□ -1.09
SSB-203ENST00000413002 GAGE2DQ9UEU5 116 aa8.22□□□□□ -1.09
SSB-203ENST00000413002 TINCRA0A1B0GVN0 87 aa8.21□□□□□ -1.1
SSB-203ENST00000413002 FAM168BA1KXE4 195 aa8.21□□□□□ -1.1
SSB-203ENST00000413002 LINC01549A6NIU2 74 aa8.21□□□□□ -1.1
SSB-203ENST00000413002 HBDP02042 147 aa8.21□□□□□ -1.1
SSB-203ENST00000413002 SMIM1B2RUZ4 78 aa8.2□□□□□ -1.1
SSB-203ENST00000413002 TRGC2P03986 189 aa8.2□□□□□ -1.1
SSB-203ENST00000413002 SPINK8P0C7L1 97 aa8.2□□□□□ -1.1
SSB-203ENST00000413002 RAB5BP61020 215 aa8.2□□□□□ -1.1
SSB-203ENST00000413002 CKS1BP61024 79 aa8.2□□□□□ -1.1
SSB-203ENST00000413002 PDZD11Q5EBL8 140 aa8.2□□□□□ -1.1
SSB-203ENST00000413002 LRP1Q07954 4544 aaKnown RBP8.2□□□□□ -1.1
SSB-203ENST00000413002 PHF5AQ7RTV0 110 aaKnown RBP8.19□□□□□ -1.1
SSB-203ENST00000413002 Q8IZM0 81 aa8.19□□□□□ -1.1
SSB-203ENST00000413002 TRBV30A0A0K0K1B3 111 aa8.18□□□□□ -1.1
SSB-203ENST00000413002 TLX1NBP0CAT3 122 aa8.18□□□□□ -1.1
SSB-203ENST00000413002 PRR3P79522 188 aaKnown RBP8.18□□□□□ -1.1
SSB-203ENST00000413002 IGLV5-45A0A087WSX0 123 aa8.17□□□□□ -1.1
SSB-203ENST00000413002 SCO1O75880 301 aa8.17□□□□□ -1.1
SSB-203ENST00000413002 FAM19A5Q7Z5A7 132 aaPredicted RBP8.17□□□□□ -1.1
SSB-203ENST00000413002 BAGE3Q86Y29 109 aa8.17□□□□□ -1.1
SSB-203ENST00000413002 FAM19A2Q8N3H0 131 aa8.17□□□□□ -1.1
SSB-203ENST00000413002 PKHD1L1Q86WI1 4243 aa8.17□□□□□ -1.1
SSB-203ENST00000413002 COLCA2A8K830 154 aa8.16□□□□□ -1.1
SSB-203ENST00000413002 KRTAP29-1A8MX34 341 aaPredicted RBP8.16□□□□□ -1.1
SSB-203ENST00000413002 NDUFC2-KCTD14E9PQ53 114 aa8.16□□□□□ -1.1
SSB-203ENST00000413002 ATP5LO75964 103 aa8.16□□□□□ -1.1
SSB-203ENST00000413002 IGLC3P0DOY3 106 aa8.16□□□□□ -1.1
SSB-203ENST00000413002 C9orf129Q5T035 196 aaKnown RBP8.16□□□□□ -1.1
SSB-203ENST00000413002 KRTAP7-1Q8IUC3 87 aa8.16□□□□□ -1.1
SSB-203ENST00000413002 COX7B2Q8TF08 81 aa8.16□□□□□ -1.1
SSB-203ENST00000413002 KRTAP9-2Q9BYQ4 174 aa8.16□□□□□ -1.1
SSB-203ENST00000413002 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.15□□□□□ -1.1
SSB-203ENST00000413002 F8VRH5 84 aa8.15□□□□□ -1.1
SSB-203ENST00000413002 ZNF22P17026 224 aaPredicted RBP8.15□□□□□ -1.1
SSB-203ENST00000413002 CHCHD1Q96BP2 118 aaKnown RBP8.15□□□□□ -1.1
SSB-203ENST00000413002 FAT3Q8TDW7 4589 aa8.14□□□□□ -1.11
SSB-203ENST00000413002 C11orf86A6NJI1 115 aa8.14□□□□□ -1.11
SSB-203ENST00000413002 KRTAP11-1Q8IUC1 163 aa8.14□□□□□ -1.11
SSB-203ENST00000413002 XAGE1AQ9HD64 81 aa8.14□□□□□ -1.11
SSB-203ENST00000413002 H3BRM9 83 aa8.13□□□□□ -1.11
SSB-203ENST00000413002 HSBP1O75506 76 aa8.13□□□□□ -1.11
SSB-203ENST00000413002 LINC00310P59036 64 aa8.13□□□□□ -1.11
SSB-203ENST00000413002 NUPR1O60356 82 aa8.12□□□□□ -1.11
SSB-203ENST00000413002 SERF1AO75920 110 aa8.12□□□□□ -1.11
SSB-203ENST00000413002 TMEM170BQ5T4T1 132 aa8.12□□□□□ -1.11
SSB-203ENST00000413002 IFI27L1Q96BM0 104 aa8.12□□□□□ -1.11
SSB-203ENST00000413002 PSORS1C2Q9UIG4 136 aa8.12□□□□□ -1.11
SSB-203ENST00000413002 CHTOPQ9Y3Y2 248 aaKnown RBP8.12□□□□□ -1.11
SSB-203ENST00000413002 KRTAP9-6A0A140TA67 174 aa8.11□□□□□ -1.11
SSB-203ENST00000413002 H0Y8G0 127 aa8.11□□□□□ -1.11
SSB-203ENST00000413002 OXTP01178 125 aa8.11□□□□□ -1.11
SSB-203ENST00000413002 CXCL5P42830 114 aa8.11□□□□□ -1.11
SSB-203ENST00000413002 SERTAD4-AS1Q5TG53 156 aa8.11□□□□□ -1.11
SSB-203ENST00000413002 IGLV5-39A0A0G2JS06 123 aa8.1□□□□□ -1.11
SSB-203ENST00000413002 M0QXV9 152 aa8.1□□□□□ -1.11
SSB-203ENST00000413002 C1orf137Q5JT78 98 aa8.1□□□□□ -1.11
SSB-203ENST00000413002 ZNF625Q96I27 306 aaPredicted RBP8.09□□□□□ -1.11
SSB-203ENST00000413002 FABP4P15090 132 aa8.08□□□□□ -1.12
SSB-203ENST00000413002 PFN2P35080 140 aa8.08□□□□□ -1.12
SSB-203ENST00000413002 SRSF9Q13242 221 aaKnown RBP eCLIP8.08□□□□□ -1.12
SSB-203ENST00000413002 TRAV12-1A0A0B4J245 112 aa8.07□□□□□ -1.12
SSB-203ENST00000413002 UBE2BP63146 152 aa8.07□□□□□ -1.12
SSB-203ENST00000413002 C22orf24Q9Y442 160 aa8.07□□□□□ -1.12
SSB-203ENST00000413002 LEPROTL1O95214 131 aa8.06□□□□□ -1.12
SSB-203ENST00000413002 MT1HL1P0DM35 61 aa8.06□□□□□ -1.12
SSB-203ENST00000413002 SPINK6Q6UWN8 80 aa8.06□□□□□ -1.12
SSB-203ENST00000413002 TMEM223A0PJW6 202 aa8.05□□□□□ -1.12
SSB-203ENST00000413002 ODF1Q14990 250 aa8.04□□□□□ -1.12
SSB-203ENST00000413002 PMCHL2Q9BQD1 86 aa8.04□□□□□ -1.12
SSB-203ENST00000413002 GAGE10A6NGK3 116 aa8.03□□□□□ -1.12
SSB-203ENST00000413002 HIST1H2BKO60814 126 aa8.03□□□□□ -1.12
SSB-203ENST00000413002 IGLV7-43P04211 117 aa8.03□□□□□ -1.12
SSB-203ENST00000413002 HIST1H2BJP06899 126 aa8.03□□□□□ -1.12
SSB-203ENST00000413002 HIST1H2BOP23527 126 aa8.03□□□□□ -1.12
SSB-203ENST00000413002 HIST1H2BBP33778 126 aa8.03□□□□□ -1.12
SSB-203ENST00000413002 HIST1H2BDP58876 126 aa8.03□□□□□ -1.12
SSB-203ENST00000413002 HIST1H2BCP62807 126 aa8.03□□□□□ -1.12
SSB-203ENST00000413002 HIST2H2BEQ16778 126 aa8.03□□□□□ -1.12
SSB-203ENST00000413002 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.03□□□□□ -1.12
SSB-203ENST00000413002 HIST1H2BHQ93079 126 aa8.03□□□□□ -1.12
SSB-203ENST00000413002 HIST1H2BNQ99877 126 aa8.03□□□□□ -1.12
SSB-203ENST00000413002 HIST1H2BMQ99879 126 aa8.03□□□□□ -1.12
SSB-203ENST00000413002 ERG28Q9UKR5 140 aa8.03□□□□□ -1.12
SSB-203ENST00000413002 A0A0U1RRA0 63 aa8.02□□□□□ -1.13
SSB-203ENST00000413002 RPL37AP8A6NKH3 93 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms