RNA–Protein interactions for RNA: ENST00000411769.1

CRKL-202, Transcript of CRK like proto-oncogene, adaptor protein, humanhuman

TSL 1 (best)

Gene CRKL, Length 2,037 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRKL-202ENST00000411769 Q9H8V8 135 aa13.29□□□□□ -0.28
CRKL-202ENST00000411769 A0A096LPF7 62 aa13.29□□□□□ -0.28
CRKL-202ENST00000411769 MT-ATP8P03928 68 aa13.29□□□□□ -0.28
CRKL-202ENST00000411769 Q6ZTC4 211 aa13.29□□□□□ -0.28
CRKL-202ENST00000411769 TRAV13-1A0A0B4J241 112 aa13.28□□□□□ -0.28
CRKL-202ENST00000411769 CIRBPQ14011 172 aaKnown RBP13.27□□□□□ -0.29
CRKL-202ENST00000411769 LINC00308Q8TCZ7 52 aa13.27□□□□□ -0.29
CRKL-202ENST00000411769 NTN5Q8WTR8 489 aaPredicted RBP13.27□□□□□ -0.29
CRKL-202ENST00000411769 NANOS2P60321 138 aaKnown RBP13.26□□□□□ -0.29
CRKL-202ENST00000411769 ZNF625Q96I27 306 aaPredicted RBP13.26□□□□□ -0.29
CRKL-202ENST00000411769 RPL13AP40429 203 aaKnown RBP13.25□□□□□ -0.29
CRKL-202ENST00000411769 H7C423 109 aa13.25□□□□□ -0.29
CRKL-202ENST00000411769 SOSTDC1Q6X4U4 206 aa13.24□□□□□ -0.29
CRKL-202ENST00000411769 C11orf45Q8TAV5 145 aa13.24□□□□□ -0.29
CRKL-202ENST00000411769 TMEM243Q9BU79 118 aa13.24□□□□□ -0.29
CRKL-202ENST00000411769 COX6CP09669 75 aa13.23□□□□□ -0.29
CRKL-202ENST00000411769 CLEC2BQ92478 149 aa13.23□□□□□ -0.29
CRKL-202ENST00000411769 TMEM262E9PQX1 116 aa13.23□□□□□ -0.29
CRKL-202ENST00000411769 TRBV6-8A0A0A6YYG3 113 aa13.22□□□□□ -0.29
CRKL-202ENST00000411769 LST1O00453 97 aa13.22□□□□□ -0.29
CRKL-202ENST00000411769 STAB2Q8WWQ8 2551 aa13.22□□□□□ -0.29
CRKL-202ENST00000411769 A0A0U1RRA0 63 aa13.21□□□□□ -0.29
CRKL-202ENST00000411769 TEX49A0A1B0GTD5 131 aa13.21□□□□□ -0.29
CRKL-202ENST00000411769 C2orf82Q6UX34 121 aa13.2□□□□□ -0.3
CRKL-202ENST00000411769 UBE2L6O14933 153 aa13.2□□□□□ -0.3
CRKL-202ENST00000411769 H3BT86 120 aa13.19□□□□□ -0.3
CRKL-202ENST00000411769 B9D2Q9BPU9 175 aa13.19□□□□□ -0.3
CRKL-202ENST00000411769 HERV-K104P63124 156 aa13.18□□□□□ -0.3
CRKL-202ENST00000411769 GAGE6Q13070 117 aa13.18□□□□□ -0.3
CRKL-202ENST00000411769 CHCHD5Q9BSY4 110 aa13.18□□□□□ -0.3
CRKL-202ENST00000411769 MRPL23Q16540 153 aaKnown RBP13.17□□□□□ -0.3
CRKL-202ENST00000411769 DEFB131BA0A096LNP1 70 aa13.17□□□□□ -0.3
CRKL-202ENST00000411769 CKS1BP61024 79 aa13.17□□□□□ -0.3
CRKL-202ENST00000411769 UBE2WQ96B02 151 aa13.17□□□□□ -0.3
CRKL-202ENST00000411769 A0A1B0GV72 72 aa13.16□□□□□ -0.3
CRKL-202ENST00000411769 MEIG1Q5JSS6 88 aa13.16□□□□□ -0.3
CRKL-202ENST00000411769 COPS9Q8WXC6 57 aa13.16□□□□□ -0.3
CRKL-202ENST00000411769 PPDPFQ9H3Y8 114 aa13.15□□□□□ -0.3
CRKL-202ENST00000411769 IGLV4-60A0A075B6I1 120 aa13.14□□□□□ -0.31
CRKL-202ENST00000411769 COX7A2LO14548 114 aa13.12□□□□□ -0.31
CRKL-202ENST00000411769 TRAV8-4A0A0B4J246 113 aa13.12□□□□□ -0.31
CRKL-202ENST00000411769 COX7B2Q8TF08 81 aa13.12□□□□□ -0.31
CRKL-202ENST00000411769 H3BNG1 76 aa13.11□□□□□ -0.31
CRKL-202ENST00000411769 IGHV3OR16-9A0A0B4J2B5 98 aa13.1□□□□□ -0.31
CRKL-202ENST00000411769 TRAV10A0A0B4J240 114 aa13.09□□□□□ -0.31
CRKL-202ENST00000411769 LYPD5Q6UWN5 251 aa13.08□□□□□ -0.31
CRKL-202ENST00000411769 Q8N3U1 123 aa13.08□□□□□ -0.31
CRKL-202ENST00000411769 IGKV3OR2-268A0A0C4DH90 116 aa13.08□□□□□ -0.32
CRKL-202ENST00000411769 LELP1Q5T871 98 aa13.07□□□□□ -0.32
CRKL-202ENST00000411769 MIR7-3HGQ8N6C7 128 aa13.06□□□□□ -0.32
CRKL-202ENST00000411769 A0A087WZ39 114 aa13.05□□□□□ -0.32
CRKL-202ENST00000411769 TOMM7Q9P0U1 55 aa13.05□□□□□ -0.32
CRKL-202ENST00000411769 IGKV2-28A0A075B6P5 120 aa13.04□□□□□ -0.32
CRKL-202ENST00000411769 IGKV2D-28P01615 120 aa13.04□□□□□ -0.32
CRKL-202ENST00000411769 NHLRC4P0CG21 123 aaPredicted RBP13.04□□□□□ -0.32
CRKL-202ENST00000411769 A0A1B0GUV1 79 aa13.03□□□□□ -0.32
CRKL-202ENST00000411769 FAM218AQ96MZ4 157 aa13.03□□□□□ -0.32
CRKL-202ENST00000411769 CSMD3Q7Z407 3707 aa13.03□□□□□ -0.32
CRKL-202ENST00000411769 LINC00959A0A1B0GUT2 108 aa13.03□□□□□ -0.32
CRKL-202ENST00000411769 SNCGO76070 127 aa13.03□□□□□ -0.32
CRKL-202ENST00000411769 TRACP01848 142 aa13.03□□□□□ -0.32
CRKL-202ENST00000411769 C15orf53Q8NAA6 179 aa13.03□□□□□ -0.32
CRKL-202ENST00000411769 DNAH7Q8WXX0 4024 aa13.02□□□□□ -0.32
CRKL-202ENST00000411769 TRAV13-2A0A0B4J235 113 aa13.02□□□□□ -0.33
CRKL-202ENST00000411769 FAM240AA0A1B0GVK7 77 aa13.02□□□□□ -0.33
CRKL-202ENST00000411769 ESRGQ1W209 222 aa13.02□□□□□ -0.33
CRKL-202ENST00000411769 CLPSL2Q6UWE3 100 aa13.02□□□□□ -0.33
CRKL-202ENST00000411769 C5orf38Q86SI9 138 aa13.02□□□□□ -0.33
CRKL-202ENST00000411769 LINC00337Q8N6G1 96 aa13.02□□□□□ -0.33
CRKL-202ENST00000411769 RPL28P46779 137 aaKnown RBP13.01□□□□□ -0.33
CRKL-202ENST00000411769 C22orf24Q9Y442 160 aa13.01□□□□□ -0.33
CRKL-202ENST00000411769 LYSTQ99698 3801 aa13.01□□□□□ -0.33
CRKL-202ENST00000411769 GAGE2BQ13066 116 aa13.01□□□□□ -0.33
CRKL-202ENST00000411769 GAGE2EQ4V326 116 aa13.01□□□□□ -0.33
CRKL-202ENST00000411769 SND1-IT1Q9HBX3 110 aa13.01□□□□□ -0.33
CRKL-202ENST00000411769 GAGE2DQ9UEU5 116 aa13.01□□□□□ -0.33
CRKL-202ENST00000411769 LINC00158P58513 81 aa13□□□□□ -0.33
CRKL-202ENST00000411769 WFDC10BQ8IUB3 73 aa13□□□□□ -0.33
CRKL-202ENST00000411769 IBA57-AS1B1ANH7 110 aa13□□□□□ -0.33
CRKL-202ENST00000411769 CCL18P55774 89 aa13□□□□□ -0.33
CRKL-202ENST00000411769 Q6Q795 121 aa13□□□□□ -0.33
CRKL-202ENST00000411769 DYNC2H1Q8NCM8 4307 aaKnown RBP12.99□□□□□ -0.33
CRKL-202ENST00000411769 ANGP03950 147 aaKnown RBP12.98□□□□□ -0.33
CRKL-202ENST00000411769 CRPP02741 224 aa12.98□□□□□ -0.33
CRKL-202ENST00000411769 BAALC-AS2P0C853 105 aa12.98□□□□□ -0.33
CRKL-202ENST00000411769 LINC00269Q8N2A0 174 aa12.98□□□□□ -0.33
CRKL-202ENST00000411769 TTC32Q5I0X7 151 aa12.95□□□□□ -0.34
CRKL-202ENST00000411769 SMIM11BQ8TCY0 68 aa12.95□□□□□ -0.34
CRKL-202ENST00000411769 ANAPC13Q9BS18 74 aa12.95□□□□□ -0.34
CRKL-202ENST00000411769 PFN2P35080 140 aa12.94□□□□□ -0.34
CRKL-202ENST00000411769 XCL1P47992 114 aa12.93□□□□□ -0.34
CRKL-202ENST00000411769 NDUFV3P56181 108 aaKnown RBP12.93□□□□□ -0.34
CRKL-202ENST00000411769 REG3AQ06141 175 aa12.93□□□□□ -0.34
CRKL-202ENST00000411769 KLK12Q9UKR0 248 aa12.93□□□□□ -0.34
CRKL-202ENST00000411769 PLECQ15149 4684 aaKnown RBP12.93□□□□□ -0.34
CRKL-202ENST00000411769 SS18Q15532 418 aa12.93□□□□□ -0.34
CRKL-202ENST00000411769 C6orf226Q5I0X4 101 aa12.92□□□□□ -0.34
CRKL-202ENST00000411769 Q9HAA7 133 aa12.92□□□□□ -0.34
CRKL-202ENST00000411769 ACYP1P07311 99 aa12.91□□□□□ -0.34
CRKL-202ENST00000411769 STARD9Q9P2P6 4700 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms