RNA–Protein interactions for RNA: ENST00000411463.2

R3HCC1-202, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS P5 TSL 5 BASIC

Gene R3HCC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-202ENST00000411463 C6orf226Q5I0X4 101 aa14.87□□□□□ -0.03
R3HCC1-202ENST00000411463 KRTAP10-4P60372 401 aaPredicted RBP14.86□□□□□ -0.03
R3HCC1-202ENST00000411463 RPL37AP61513 92 aaKnown RBP14.86□□□□□ -0.03
R3HCC1-202ENST00000411463 Q8IZM0 81 aa14.86□□□□□ -0.03
R3HCC1-202ENST00000411463 TRBV30A0A0K0K1B3 111 aa14.84□□□□□ -0.03
R3HCC1-202ENST00000411463 CKS1BP61024 79 aa14.84□□□□□ -0.03
R3HCC1-202ENST00000411463 SMIM1B2RUZ4 78 aa14.83□□□□□ -0.03
R3HCC1-202ENST00000411463 HSBP1O75506 76 aa14.83□□□□□ -0.03
R3HCC1-202ENST00000411463 TLX1NBP0CAT3 122 aa14.82□□□□□ -0.04
R3HCC1-202ENST00000411463 IGLC3P0DOY3 106 aa14.82□□□□□ -0.04
R3HCC1-202ENST00000411463 C7orf33Q8WU49 177 aa14.82□□□□□ -0.04
R3HCC1-202ENST00000411463 H3BRM9 83 aa14.8□□□□□ -0.04
R3HCC1-202ENST00000411463 Q6ZRP5 223 aa14.8□□□□□ -0.04
R3HCC1-202ENST00000411463 FAM19A2Q8N3H0 131 aa14.8□□□□□ -0.04
R3HCC1-202ENST00000411463 SPINK8P0C7L1 97 aa14.79□□□□□ -0.04
R3HCC1-202ENST00000411463 IFI27L1Q96BM0 104 aa14.79□□□□□ -0.04
R3HCC1-202ENST00000411463 SERF1AO75920 110 aa14.78□□□□□ -0.04
R3HCC1-202ENST00000411463 COX7B2Q8TF08 81 aa14.78□□□□□ -0.04
R3HCC1-202ENST00000411463 A0A1W2PNN7 141 aa14.77□□□□□ -0.04
R3HCC1-202ENST00000411463 CXCL5P42830 114 aa14.77□□□□□ -0.04
R3HCC1-202ENST00000411463 C9orf116Q5BN46 136 aaPredicted RBP14.77□□□□□ -0.04
R3HCC1-202ENST00000411463 F8VRH5 84 aa14.76□□□□□ -0.05
R3HCC1-202ENST00000411463 LINC00310P59036 64 aa14.76□□□□□ -0.05
R3HCC1-202ENST00000411463 GAGE2EQ4V326 116 aa14.76□□□□□ -0.05
R3HCC1-202ENST00000411463 GAGE2DQ9UEU5 116 aa14.76□□□□□ -0.05
R3HCC1-202ENST00000411463 NDUFC2-KCTD14E9PQ53 114 aa14.76□□□□□ -0.05
R3HCC1-202ENST00000411463 ZNF22P17026 224 aaPredicted RBP14.76□□□□□ -0.05
R3HCC1-202ENST00000411463 CHTOPQ9Y3Y2 248 aaKnown RBP14.76□□□□□ -0.05
R3HCC1-202ENST00000411463 FLG2Q5D862 2391 aaPredicted RBP14.74□□□□□ -0.05
R3HCC1-202ENST00000411463 TRAV12-1A0A0B4J245 112 aa14.74□□□□□ -0.05
R3HCC1-202ENST00000411463 C11orf86A6NJI1 115 aa14.74□□□□□ -0.05
R3HCC1-202ENST00000411463 IGLV5-39A0A0G2JS06 123 aa14.71□□□□□ -0.05
R3HCC1-202ENST00000411463 NUPR1O60356 82 aa14.71□□□□□ -0.05
R3HCC1-202ENST00000411463 TMEM170BQ5T4T1 132 aa14.71□□□□□ -0.05
R3HCC1-202ENST00000411463 LEPROTL1O95214 131 aa14.7□□□□□ -0.06
R3HCC1-202ENST00000411463 FAM168BA1KXE4 195 aa14.69□□□□□ -0.06
R3HCC1-202ENST00000411463 HNRNPA3P51991 378 aaKnown RBP14.69□□□□□ -0.06
R3HCC1-202ENST00000411463 MYCBP2O75592 4640 aa14.68□□□□□ -0.06
R3HCC1-202ENST00000411463 HIST1H2BKO60814 126 aa14.67□□□□□ -0.06
R3HCC1-202ENST00000411463 HIST1H2BJP06899 126 aa14.67□□□□□ -0.06
R3HCC1-202ENST00000411463 HIST1H2BOP23527 126 aa14.67□□□□□ -0.06
R3HCC1-202ENST00000411463 HIST1H2BBP33778 126 aa14.67□□□□□ -0.06
R3HCC1-202ENST00000411463 HIST1H2BDP58876 126 aa14.67□□□□□ -0.06
R3HCC1-202ENST00000411463 HIST1H2BCP62807 126 aa14.67□□□□□ -0.06
R3HCC1-202ENST00000411463 PRR3P79522 188 aaKnown RBP14.67□□□□□ -0.06
R3HCC1-202ENST00000411463 HIST2H2BEQ16778 126 aa14.67□□□□□ -0.06
R3HCC1-202ENST00000411463 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.67□□□□□ -0.06
R3HCC1-202ENST00000411463 C9orf129Q5T035 196 aaKnown RBP14.67□□□□□ -0.06
R3HCC1-202ENST00000411463 HIST1H2BHQ93079 126 aa14.67□□□□□ -0.06
R3HCC1-202ENST00000411463 HIST1H2BNQ99877 126 aa14.67□□□□□ -0.06
R3HCC1-202ENST00000411463 HIST1H2BMQ99879 126 aa14.67□□□□□ -0.06
R3HCC1-202ENST00000411463 FAM19A5Q7Z5A7 132 aaPredicted RBP14.66□□□□□ -0.06
R3HCC1-202ENST00000411463 H0Y8G0 127 aa14.65□□□□□ -0.06
R3HCC1-202ENST00000411463 FABP4P15090 132 aa14.65□□□□□ -0.06
R3HCC1-202ENST00000411463 PHF5AQ7RTV0 110 aaKnown RBP14.65□□□□□ -0.06
R3HCC1-202ENST00000411463 HSPB8Q9UJY1 196 aa14.65□□□□□ -0.06
R3HCC1-202ENST00000411463 XAGE1AQ9HD64 81 aa14.63□□□□□ -0.07
R3HCC1-202ENST00000411463 ODF1Q14990 250 aa14.63□□□□□ -0.07
R3HCC1-202ENST00000411463 KRTAP7-1Q8IUC3 87 aa14.63□□□□□ -0.07
R3HCC1-202ENST00000411463 TMEM223A0PJW6 202 aa14.61□□□□□ -0.07
R3HCC1-202ENST00000411463 M0QXV9 152 aa14.59□□□□□ -0.07
R3HCC1-202ENST00000411463 DMBT1Q9UGM3 2413 aaPredicted RBP14.58□□□□□ -0.07
R3HCC1-202ENST00000411463 KRTAP29-1A8MX34 341 aaPredicted RBP14.58□□□□□ -0.08
R3HCC1-202ENST00000411463 SFTA2Q6UW10 78 aa14.57□□□□□ -0.08
R3HCC1-202ENST00000411463 PSORS1C2Q9UIG4 136 aa14.57□□□□□ -0.08
R3HCC1-202ENST00000411463 TMA7Q9Y2S6 64 aaKnown RBP14.57□□□□□ -0.08
R3HCC1-202ENST00000411463 J3QL48 77 aa14.56□□□□□ -0.08
R3HCC1-202ENST00000411463 PFN2P35080 140 aa14.56□□□□□ -0.08
R3HCC1-202ENST00000411463 SERTAD4-AS1Q5TG53 156 aa14.56□□□□□ -0.08
R3HCC1-202ENST00000411463 MAP1LC3CQ9BXW4 147 aa14.56□□□□□ -0.08
R3HCC1-202ENST00000411463 OXTP01178 125 aa14.55□□□□□ -0.08
R3HCC1-202ENST00000411463 PLNP26678 52 aa14.55□□□□□ -0.08
R3HCC1-202ENST00000411463 ZNF625Q96I27 306 aaPredicted RBP14.55□□□□□ -0.08
R3HCC1-202ENST00000411463 ERG28Q9UKR5 140 aa14.55□□□□□ -0.08
R3HCC1-202ENST00000411463 UBE2BP63146 152 aa14.52□□□□□ -0.08
R3HCC1-202ENST00000411463 COX17Q14061 63 aa14.52□□□□□ -0.08
R3HCC1-202ENST00000411463 KRTAP11-1Q8IUC1 163 aa14.52□□□□□ -0.08
R3HCC1-202ENST00000411463 C22orf24Q9Y442 160 aa14.52□□□□□ -0.08
R3HCC1-202ENST00000411463 DPM2O94777 84 aa14.51□□□□□ -0.09
R3HCC1-202ENST00000411463 C1orf137Q5JT78 98 aa14.51□□□□□ -0.09
R3HCC1-202ENST00000411463 PMCHL2Q9BQD1 86 aa14.51□□□□□ -0.09
R3HCC1-202ENST00000411463 PKHD1L1Q86WI1 4243 aa14.5□□□□□ -0.09
R3HCC1-202ENST00000411463 SRSF9Q13242 221 aaKnown RBP eCLIP14.5□□□□□ -0.09
R3HCC1-202ENST00000411463 COA6Q5JTJ3 125 aaKnown RBP14.5□□□□□ -0.09
R3HCC1-202ENST00000411463 SPINK6Q6UWN8 80 aa14.5□□□□□ -0.09
R3HCC1-202ENST00000411463 IGKCP01834 107 aa14.49□□□□□ -0.09
R3HCC1-202ENST00000411463 LBHQ53QV2 105 aaPredicted RBP14.49□□□□□ -0.09
R3HCC1-202ENST00000411463 PLA2G2DQ9UNK4 145 aa14.49□□□□□ -0.09
R3HCC1-202ENST00000411463 TP73-AS1Q9UF72 201 aa14.48□□□□□ -0.09
R3HCC1-202ENST00000411463 SYS1-DBNDD2H3BUS1 97 aa14.46□□□□□ -0.09
R3HCC1-202ENST00000411463 MRPL55Q7Z7F7 128 aaKnown RBP14.46□□□□□ -0.09
R3HCC1-202ENST00000411463 SND1-IT1Q9HBX3 110 aa14.46□□□□□ -0.09
R3HCC1-202ENST00000411463 LRP1Q07954 4544 aaKnown RBP14.46□□□□□ -0.1
R3HCC1-202ENST00000411463 S100A6P06703 90 aa14.45□□□□□ -0.1
R3HCC1-202ENST00000411463 LINC00158P58513 81 aa14.44□□□□□ -0.1
R3HCC1-202ENST00000411463 HERVK_113P61574 105 aa14.44□□□□□ -0.1
R3HCC1-202ENST00000411463 NDUFA12Q9UI09 145 aa14.44□□□□□ -0.1
R3HCC1-202ENST00000411463 LEPROTO15243 131 aa14.44□□□□□ -0.1
R3HCC1-202ENST00000411463 IGLV7-43P04211 117 aa14.44□□□□□ -0.1
R3HCC1-202ENST00000411463 HERV-K104P63124 156 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms