RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 LYRM9A8MSI8 78 aa11.8□□□□□ -0.52
GCFC2-202ENST00000409857 IFITM1P13164 125 aa11.8□□□□□ -0.52
GCFC2-202ENST00000409857 TRAV13-1A0A0B4J241 112 aa11.79□□□□□ -0.52
GCFC2-202ENST00000409857 SOSTDC1Q6X4U4 206 aa11.79□□□□□ -0.52
GCFC2-202ENST00000409857 TGP01266 2768 aa11.79□□□□□ -0.52
GCFC2-202ENST00000409857 SPART-AS1P0CW21 52 aa11.79□□□□□ -0.52
GCFC2-202ENST00000409857 TRGV1A0A0A0MS02 117 aa11.77□□□□□ -0.53
GCFC2-202ENST00000409857 IGLV5-39A0A0G2JS06 123 aa11.77□□□□□ -0.53
GCFC2-202ENST00000409857 CIRBPQ14011 172 aaKnown RBP11.77□□□□□ -0.53
GCFC2-202ENST00000409857 FAM222AQ5U5X8 452 aa11.77□□□□□ -0.53
GCFC2-202ENST00000409857 LINC00612Q8N6U2 182 aa11.77□□□□□ -0.53
GCFC2-202ENST00000409857 NOP10Q9NPE3 64 aaKnown RBP11.77□□□□□ -0.53
GCFC2-202ENST00000409857 SMIM1B2RUZ4 78 aa11.76□□□□□ -0.53
GCFC2-202ENST00000409857 NTM-AS1Q6ZSK4 140 aa11.76□□□□□ -0.53
GCFC2-202ENST00000409857 C11orf45Q8TAV5 145 aa11.76□□□□□ -0.53
GCFC2-202ENST00000409857 CELA1Q9UNI1 258 aa11.76□□□□□ -0.53
GCFC2-202ENST00000409857 HERVK_113P63121 156 aa11.76□□□□□ -0.53
GCFC2-202ENST00000409857 Q6Q795 121 aa11.75□□□□□ -0.53
GCFC2-202ENST00000409857 WWC2-AS2Q96NR7 200 aa11.74□□□□□ -0.53
GCFC2-202ENST00000409857 MEIG1Q5JSS6 88 aa11.74□□□□□ -0.53
GCFC2-202ENST00000409857 Q6ZTI0 123 aa11.74□□□□□ -0.53
GCFC2-202ENST00000409857 COX7A2LO14548 114 aa11.71□□□□□ -0.53
GCFC2-202ENST00000409857 DAD1P61803 113 aa11.71□□□□□ -0.53
GCFC2-202ENST00000409857 NANOS2P60321 138 aaKnown RBP11.71□□□□□ -0.53
GCFC2-202ENST00000409857 F5H768 121 aa11.7□□□□□ -0.54
GCFC2-202ENST00000409857 FAM240AA0A1B0GVK7 77 aa11.7□□□□□ -0.54
GCFC2-202ENST00000409857 K7EQD1 137 aa11.7□□□□□ -0.54
GCFC2-202ENST00000409857 RPL36AP83881 106 aaKnown RBP11.7□□□□□ -0.54
GCFC2-202ENST00000409857 RPL36ALQ969Q0 106 aaKnown RBP11.7□□□□□ -0.54
GCFC2-202ENST00000409857 CDC42SE2Q9NRR3 84 aa11.7□□□□□ -0.54
GCFC2-202ENST00000409857 DEFB130BP0DP73 79 aa11.69□□□□□ -0.54
GCFC2-202ENST00000409857 DEFB130AP0DP74 79 aa11.69□□□□□ -0.54
GCFC2-202ENST00000409857 FAM218AQ96MZ4 157 aa11.69□□□□□ -0.54
GCFC2-202ENST00000409857 DNAH7Q8WXX0 4024 aa11.69□□□□□ -0.54
GCFC2-202ENST00000409857 Q6ZTC4 211 aa11.68□□□□□ -0.54
GCFC2-202ENST00000409857 FAM19A3Q7Z5A8 133 aa11.68□□□□□ -0.54
GCFC2-202ENST00000409857 CHCHD5Q9BSY4 110 aa11.68□□□□□ -0.54
GCFC2-202ENST00000409857 PPDPFQ9H3Y8 114 aa11.68□□□□□ -0.54
GCFC2-202ENST00000409857 TRGV2A0A075B6R0 118 aa11.67□□□□□ -0.54
GCFC2-202ENST00000409857 MRPL23Q16540 153 aaKnown RBP11.67□□□□□ -0.54
GCFC2-202ENST00000409857 TRAV10A0A0B4J240 114 aa11.66□□□□□ -0.54
GCFC2-202ENST00000409857 LOC100131303A0A0U1RQF7 123 aa11.66□□□□□ -0.54
GCFC2-202ENST00000409857 ATP5G1P05496 136 aa11.66□□□□□ -0.54
GCFC2-202ENST00000409857 DAZ4Q86SG3 579 aaKnown RBP11.66□□□□□ -0.54
GCFC2-202ENST00000409857 MUC7Q8TAX7 377 aa11.66□□□□□ -0.54
GCFC2-202ENST00000409857 SMCR5Q8TEV8 140 aa11.66□□□□□ -0.54
GCFC2-202ENST00000409857 DAZ3Q9NR90 486 aaKnown RBP11.66□□□□□ -0.54
GCFC2-202ENST00000409857 CSDC2Q9Y534 153 aaKnown RBP11.66□□□□□ -0.54
GCFC2-202ENST00000409857 C22orf24Q9Y442 160 aa11.65□□□□□ -0.54
GCFC2-202ENST00000409857 IGKV3OR2-268A0A0C4DH90 116 aa11.65□□□□□ -0.54
GCFC2-202ENST00000409857 TRBV10-1A0A0K0K1A3 114 aa11.64□□□□□ -0.55
GCFC2-202ENST00000409857 BAALC-AS2P0C853 105 aa11.64□□□□□ -0.55
GCFC2-202ENST00000409857 TMEM126AQ9H061 195 aa11.64□□□□□ -0.55
GCFC2-202ENST00000409857 Q9HAA7 133 aa11.64□□□□□ -0.55
GCFC2-202ENST00000409857 DEFB131BA0A096LNP1 70 aa11.63□□□□□ -0.55
GCFC2-202ENST00000409857 NUPR2A6NF83 97 aa11.63□□□□□ -0.55
GCFC2-202ENST00000409857 TRBV7-7A0A0K0K1E9 115 aa11.63□□□□□ -0.55
GCFC2-202ENST00000409857 UBE2L6O14933 153 aa11.63□□□□□ -0.55
GCFC2-202ENST00000409857 C3orf84H3BNL1 204 aa11.62□□□□□ -0.55
GCFC2-202ENST00000409857 COPS9Q8WXC6 57 aa11.62□□□□□ -0.55
GCFC2-202ENST00000409857 TOMM7Q9P0U1 55 aa11.62□□□□□ -0.55
GCFC2-202ENST00000409857 TMEM243Q9BU79 118 aa11.62□□□□□ -0.55
GCFC2-202ENST00000409857 MIR7-3HGQ8N6C7 128 aa11.61□□□□□ -0.55
GCFC2-202ENST00000409857 TRACP01848 142 aa11.61□□□□□ -0.55
GCFC2-202ENST00000409857 LINC00337Q8N6G1 96 aa11.61□□□□□ -0.55
GCFC2-202ENST00000409857 IGKV2-28A0A075B6P5 120 aa11.59□□□□□ -0.55
GCFC2-202ENST00000409857 FAM236AA0A1B0GUQ0 79 aa11.59□□□□□ -0.55
GCFC2-202ENST00000409857 FAM236BA0A1B0GV22 79 aa11.59□□□□□ -0.55
GCFC2-202ENST00000409857 IGKV2D-28P01615 120 aa11.59□□□□□ -0.55
GCFC2-202ENST00000409857 FHL2Q14192 279 aa11.59□□□□□ -0.55
GCFC2-202ENST00000409857 KLK5Q9Y337 293 aaPredicted RBP11.59□□□□□ -0.55
GCFC2-202ENST00000409857 HTN3P15516 51 aa11.59□□□□□ -0.55
GCFC2-202ENST00000409857 COX7B2Q8TF08 81 aa11.59□□□□□ -0.55
GCFC2-202ENST00000409857 ACYP1P07311 99 aa11.58□□□□□ -0.56
GCFC2-202ENST00000409857 IGLV4-60A0A075B6I1 120 aa11.58□□□□□ -0.56
GCFC2-202ENST00000409857 CSMD3Q7Z407 3707 aa11.58□□□□□ -0.56
GCFC2-202ENST00000409857 TRGV4A0A0C4DH28 118 aa11.57□□□□□ -0.56
GCFC2-202ENST00000409857 H3BNG1 76 aa11.57□□□□□ -0.56
GCFC2-202ENST00000409857 SND1-IT1Q9HBX3 110 aa11.57□□□□□ -0.56
GCFC2-202ENST00000409857 CRPP02741 224 aa11.57□□□□□ -0.56
GCFC2-202ENST00000409857 PRO0255Q9UI72 69 aa11.57□□□□□ -0.56
GCFC2-202ENST00000409857 DYNC2H1Q8NCM8 4307 aaKnown RBP11.56□□□□□ -0.56
GCFC2-202ENST00000409857 RPL28P46779 137 aaKnown RBP11.56□□□□□ -0.56
GCFC2-202ENST00000409857 LINC00158P58513 81 aa11.56□□□□□ -0.56
GCFC2-202ENST00000409857 C9orf129Q5T035 196 aaKnown RBP11.56□□□□□ -0.56
GCFC2-202ENST00000409857 CASC10Q5T4H9 136 aa11.56□□□□□ -0.56
GCFC2-202ENST00000409857 A0A087WYN8 130 aa11.55□□□□□ -0.56
GCFC2-202ENST00000409857 TRAV13-2A0A0B4J235 113 aa11.55□□□□□ -0.56
GCFC2-202ENST00000409857 GAGE2AQ6NT46 116 aa11.55□□□□□ -0.56
GCFC2-202ENST00000409857 TRBV6-4A0A1B0GX49 114 aa11.55□□□□□ -0.56
GCFC2-202ENST00000409857 SMIM11BQ8TCY0 68 aa11.55□□□□□ -0.56
GCFC2-202ENST00000409857 MALP21145 153 aa11.54□□□□□ -0.56
GCFC2-202ENST00000409857 C5orf47Q569G3 176 aa11.54□□□□□ -0.56
GCFC2-202ENST00000409857 LINC00643Q86TS7 51 aa11.54□□□□□ -0.56
GCFC2-202ENST00000409857 PFN2P35080 140 aa11.53□□□□□ -0.56
GCFC2-202ENST00000409857 CCL18P55774 89 aa11.53□□□□□ -0.56
GCFC2-202ENST00000409857 C5orf38Q86SI9 138 aa11.53□□□□□ -0.56
GCFC2-202ENST00000409857 PAX4O43316 350 aa11.52□□□□□ -0.56
GCFC2-202ENST00000409857 STARD9Q9P2P6 4700 aa11.52□□□□□ -0.57
GCFC2-202ENST00000409857 SDIM1Q6ZPB5 146 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms