RNA–Protein interactions for RNA: ENST00000404970.3

VAMP2-202, Transcript of vesicle associated membrane protein 2, humanhuman

TSL 2 BASIC

Gene VAMP2, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-202ENST00000404970 LINC00469Q8N7U9 141 aa8.89□□□□□ -0.99
VAMP2-202ENST00000404970 HIST1H2BHQ93079 126 aa8.89□□□□□ -0.99
VAMP2-202ENST00000404970 HIST1H2BNQ99877 126 aa8.89□□□□□ -0.99
VAMP2-202ENST00000404970 HIST1H2BMQ99879 126 aa8.89□□□□□ -0.99
VAMP2-202ENST00000404970 C6orf48Q9UBA6 75 aa8.89□□□□□ -0.99
VAMP2-202ENST00000404970 SMIM1B2RUZ4 78 aa8.88□□□□□ -0.99
VAMP2-202ENST00000404970 LEPROTL1O95214 131 aa8.88□□□□□ -0.99
VAMP2-202ENST00000404970 HSPB8Q9UJY1 196 aa8.88□□□□□ -0.99
VAMP2-202ENST00000404970 TRAV12-1A0A0B4J245 112 aa8.87□□□□□ -0.99
VAMP2-202ENST00000404970 H3BRM9 83 aa8.87□□□□□ -0.99
VAMP2-202ENST00000404970 NDUFA1O15239 70 aa8.87□□□□□ -0.99
VAMP2-202ENST00000404970 PRSS2P07478 247 aa8.87□□□□□ -0.99
VAMP2-202ENST00000404970 IGLC3P0DOY3 106 aa8.87□□□□□ -0.99
VAMP2-202ENST00000404970 MAJINQ3KP22 176 aa8.87□□□□□ -0.99
VAMP2-202ENST00000404970 MRPL35Q9NZE8 188 aaKnown RBP8.87□□□□□ -0.99
VAMP2-202ENST00000404970 PTTG1IPP53801 180 aa8.86□□□□□ -0.99
VAMP2-202ENST00000404970 RNF151Q2KHN1 245 aa8.86□□□□□ -0.99
VAMP2-202ENST00000404970 PLAC8Q9NZF1 115 aa8.86□□□□□ -0.99
VAMP2-202ENST00000404970 LOC107984640A0A0U1RRK4 108 aa8.85□□□□□ -0.99
VAMP2-202ENST00000404970 SPINK8P0C7L1 97 aa8.85□□□□□ -0.99
VAMP2-202ENST00000404970 Q8IZM0 81 aa8.85□□□□□ -0.99
VAMP2-202ENST00000404970 TOMM7Q9P0U1 55 aa8.85□□□□□ -0.99
VAMP2-202ENST00000404970 CHTOPQ9Y3Y2 248 aaKnown RBP8.85□□□□□ -0.99
VAMP2-202ENST00000404970 MYCBP2O75592 4640 aa8.84□□□□□ -0.99
VAMP2-202ENST00000404970 FAM229AH3BQW9 127 aa8.84□□□□□ -0.99
VAMP2-202ENST00000404970 ZNF22P17026 224 aaPredicted RBP8.84□□□□□ -0.99
VAMP2-202ENST00000404970 GAGE2BQ13066 116 aa8.84□□□□□ -0.99
VAMP2-202ENST00000404970 C9orf116Q5BN46 136 aaPredicted RBP8.84□□□□□ -0.99
VAMP2-202ENST00000404970 LINC00474Q9P2X8 69 aa8.84□□□□□ -0.99
VAMP2-202ENST00000404970 C11orf86A6NJI1 115 aa8.83□□□□□ -1
VAMP2-202ENST00000404970 CKS1BP61024 79 aa8.83□□□□□ -1
VAMP2-202ENST00000404970 C6orf226Q5I0X4 101 aa8.83□□□□□ -1
VAMP2-202ENST00000404970 STPG4Q8N801 248 aa8.83□□□□□ -1
VAMP2-202ENST00000404970 F8VRH5 84 aa8.83□□□□□ -1
VAMP2-202ENST00000404970 CXCL5P42830 114 aa8.83□□□□□ -1
VAMP2-202ENST00000404970 RPL18AQ02543 176 aaKnown RBP8.83□□□□□ -1
VAMP2-202ENST00000404970 Q6ZRP5 223 aa8.83□□□□□ -1
VAMP2-202ENST00000404970 TRBV30A0A0K0K1B3 111 aa8.82□□□□□ -1
VAMP2-202ENST00000404970 A0A1W2PNN7 141 aa8.82□□□□□ -1
VAMP2-202ENST00000404970 DPH3Q96FX2 82 aa8.82□□□□□ -1
VAMP2-202ENST00000404970 IGLV5-39A0A0G2JS06 123 aa8.81□□□□□ -1
VAMP2-202ENST00000404970 TLX1NBP0CAT3 122 aa8.81□□□□□ -1
VAMP2-202ENST00000404970 FABP4P15090 132 aa8.81□□□□□ -1
VAMP2-202ENST00000404970 COA6Q5JTJ3 125 aaKnown RBP8.81□□□□□ -1
VAMP2-202ENST00000404970 HNRNPA3P51991 378 aaKnown RBP8.8□□□□□ -1
VAMP2-202ENST00000404970 TMEM170BQ5T4T1 132 aa8.8□□□□□ -1
VAMP2-202ENST00000404970 COX7B2Q8TF08 81 aa8.8□□□□□ -1
VAMP2-202ENST00000404970 MAP1LC3CQ9BXW4 147 aa8.8□□□□□ -1
VAMP2-202ENST00000404970 FLG2Q5D862 2391 aaPredicted RBP8.8□□□□□ -1
VAMP2-202ENST00000404970 FAM168BA1KXE4 195 aa8.79□□□□□ -1
VAMP2-202ENST00000404970 H0Y8G0 127 aa8.79□□□□□ -1
VAMP2-202ENST00000404970 INAFM2P0DMQ5 153 aa8.79□□□□□ -1
VAMP2-202ENST00000404970 KRTAP7-1Q8IUC3 87 aa8.79□□□□□ -1
VAMP2-202ENST00000404970 PLA2G1BP04054 148 aaKnown RBP8.78□□□□□ -1
VAMP2-202ENST00000404970 RPL37AP61513 92 aaKnown RBP8.78□□□□□ -1
VAMP2-202ENST00000404970 ODF1Q14990 250 aa8.78□□□□□ -1
VAMP2-202ENST00000404970 PLNP26678 52 aa8.77□□□□□ -1
VAMP2-202ENST00000404970 GAGE2EQ4V326 116 aa8.77□□□□□ -1.01
VAMP2-202ENST00000404970 C9orf129Q5T035 196 aaKnown RBP8.77□□□□□ -1.01
VAMP2-202ENST00000404970 SFTA2Q6UW10 78 aa8.77□□□□□ -1.01
VAMP2-202ENST00000404970 GAGE2DQ9UEU5 116 aa8.77□□□□□ -1.01
VAMP2-202ENST00000404970 NDUFC2-KCTD14E9PQ53 114 aa8.76□□□□□ -1.01
VAMP2-202ENST00000404970 LRP1Q07954 4544 aaKnown RBP8.75□□□□□ -1.01
VAMP2-202ENST00000404970 TMEM223A0PJW6 202 aa8.75□□□□□ -1.01
VAMP2-202ENST00000404970 DPM2O94777 84 aa8.75□□□□□ -1.01
VAMP2-202ENST00000404970 FAT3Q8TDW7 4589 aa8.75□□□□□ -1.01
VAMP2-202ENST00000404970 PMCHL2Q9BQD1 86 aa8.74□□□□□ -1.01
VAMP2-202ENST00000404970 SYS1-DBNDD2H3BUS1 97 aa8.73□□□□□ -1.01
VAMP2-202ENST00000404970 IGKCP01834 107 aa8.73□□□□□ -1.01
VAMP2-202ENST00000404970 PHF5AQ7RTV0 110 aaKnown RBP8.73□□□□□ -1.01
VAMP2-202ENST00000404970 KRTAP11-1Q8IUC1 163 aa8.73□□□□□ -1.01
VAMP2-202ENST00000404970 S100A6P06703 90 aa8.72□□□□□ -1.01
VAMP2-202ENST00000404970 PET117Q6UWS5 81 aa8.72□□□□□ -1.01
VAMP2-202ENST00000404970 FAM19A5Q7Z5A7 132 aaPredicted RBP8.72□□□□□ -1.01
VAMP2-202ENST00000404970 XAGE1AQ9HD64 81 aa8.72□□□□□ -1.01
VAMP2-202ENST00000404970 HERVK_113P61574 105 aa8.71□□□□□ -1.01
VAMP2-202ENST00000404970 PRR3P79522 188 aaKnown RBP8.71□□□□□ -1.01
VAMP2-202ENST00000404970 SERTAD4-AS1Q5TG53 156 aa8.71□□□□□ -1.01
VAMP2-202ENST00000404970 ZNF625Q96I27 306 aaPredicted RBP8.71□□□□□ -1.01
VAMP2-202ENST00000404970 C7orf33Q8WU49 177 aa8.7□□□□□ -1.02
VAMP2-202ENST00000404970 S100A2P29034 98 aa8.7□□□□□ -1.02
VAMP2-202ENST00000404970 TSPEAR-AS2P59090 65 aa8.7□□□□□ -1.02
VAMP2-202ENST00000404970 COX17Q14061 63 aa8.69□□□□□ -1.02
VAMP2-202ENST00000404970 LINC01545Q5VT33 79 aa8.69□□□□□ -1.02
VAMP2-202ENST00000404970 PLEKHB2Q96CS7 222 aa8.69□□□□□ -1.02
VAMP2-202ENST00000404970 C20orf202A1L168 122 aa8.68□□□□□ -1.02
VAMP2-202ENST00000404970 C3orf79P0CE67 100 aa8.68□□□□□ -1.02
VAMP2-202ENST00000404970 KRTDAPP60985 99 aa8.68□□□□□ -1.02
VAMP2-202ENST00000404970 HERC1Q15751 4861 aa8.67□□□□□ -1.02
VAMP2-202ENST00000404970 M0QXV9 152 aa8.67□□□□□ -1.02
VAMP2-202ENST00000404970 LEPROTO15243 131 aa8.67□□□□□ -1.02
VAMP2-202ENST00000404970 AKR1D1P51857 326 aa8.67□□□□□ -1.02
VAMP2-202ENST00000404970 PFN2P35080 140 aa8.66□□□□□ -1.02
VAMP2-202ENST00000404970 HERV-K104P63124 156 aa8.66□□□□□ -1.02
VAMP2-202ENST00000404970 HIST3H2BBQ8N257 126 aa8.66□□□□□ -1.02
VAMP2-202ENST00000404970 PSORS1C2Q9UIG4 136 aa8.66□□□□□ -1.02
VAMP2-202ENST00000404970 ERG28Q9UKR5 140 aa8.66□□□□□ -1.02
VAMP2-202ENST00000404970 MYMXA0A1B0GTQ4 84 aa8.65□□□□□ -1.02
VAMP2-202ENST00000404970 LINC00587B1AMM8 73 aa8.65□□□□□ -1.02
VAMP2-202ENST00000404970 Q8NDZ9 215 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms