RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 NDUFC2-KCTD14E9PQ53 114 aa8.19□□□□□ -1.1
SDF4-203ENST00000403997 RHEBQ15382 184 aa8.19□□□□□ -1.1
SDF4-203ENST00000403997 C1orf137Q5JT78 98 aa8.19□□□□□ -1.1
SDF4-203ENST00000403997 FA2HQ7L5A8 372 aa8.19□□□□□ -1.1
SDF4-203ENST00000403997 MRPL18Q9H0U6 180 aaKnown RBP8.19□□□□□ -1.1
SDF4-203ENST00000403997 CARHSP1Q9Y2V2 147 aaKnown RBP8.19□□□□□ -1.1
SDF4-203ENST00000403997 LINC01549A6NIU2 74 aa8.18□□□□□ -1.1
SDF4-203ENST00000403997 Q8IZM0 81 aa8.18□□□□□ -1.1
SDF4-203ENST00000403997 SMCO4Q9NRQ5 59 aa8.18□□□□□ -1.1
SDF4-203ENST00000403997 LINC01546A6NGU7 62 aa8.17□□□□□ -1.1
SDF4-203ENST00000403997 LINC00469Q8N7U9 141 aa8.17□□□□□ -1.1
SDF4-203ENST00000403997 C9orf129Q5T035 196 aaKnown RBP8.16□□□□□ -1.1
SDF4-203ENST00000403997 KRTAP7-1Q8IUC3 87 aa8.16□□□□□ -1.1
SDF4-203ENST00000403997 TINCRA0A1B0GVN0 87 aa8.15□□□□□ -1.1
SDF4-203ENST00000403997 M0QXV9 152 aa8.15□□□□□ -1.1
SDF4-203ENST00000403997 KRTAP10-8P60410 259 aa8.15□□□□□ -1.1
SDF4-203ENST00000403997 UBE2BP63146 152 aa8.15□□□□□ -1.1
SDF4-203ENST00000403997 KRTAP11-1Q8IUC1 163 aa8.15□□□□□ -1.1
SDF4-203ENST00000403997 CST9LQ9H4G1 147 aa8.15□□□□□ -1.1
SDF4-203ENST00000403997 TRAPPC1Q9Y5R8 145 aa8.15□□□□□ -1.1
SDF4-203ENST00000403997 TNXBP22105 4242 aa8.14□□□□□ -1.11
SDF4-203ENST00000403997 F8VRH5 84 aa8.14□□□□□ -1.11
SDF4-203ENST00000403997 IGLV7-43P04211 117 aa8.14□□□□□ -1.11
SDF4-203ENST00000403997 SMIM1B2RUZ4 78 aa8.13□□□□□ -1.11
SDF4-203ENST00000403997 APOC3P02656 99 aa8.13□□□□□ -1.11
SDF4-203ENST00000403997 CXCL5P42830 114 aa8.13□□□□□ -1.11
SDF4-203ENST00000403997 PMVKQ15126 192 aa8.13□□□□□ -1.11
SDF4-203ENST00000403997 PDZD11Q5EBL8 140 aa8.13□□□□□ -1.11
SDF4-203ENST00000403997 ODF1Q14990 250 aa8.12□□□□□ -1.11
SDF4-203ENST00000403997 COX7B2Q8TF08 81 aa8.12□□□□□ -1.11
SDF4-203ENST00000403997 DIRC1Q969H9 104 aa8.12□□□□□ -1.11
SDF4-203ENST00000403997 XAGE1AQ9HD64 81 aa8.12□□□□□ -1.11
SDF4-203ENST00000403997 HMCN2Q8NDA2 5059 aa8.11□□□□□ -1.11
SDF4-203ENST00000403997 IGLV5-45A0A087WSX0 123 aa8.11□□□□□ -1.11
SDF4-203ENST00000403997 SPINK8P0C7L1 97 aa8.11□□□□□ -1.11
SDF4-203ENST00000403997 LINC00614P0C842 121 aa8.11□□□□□ -1.11
SDF4-203ENST00000403997 NDUFA6P56556 154 aa8.11□□□□□ -1.11
SDF4-203ENST00000403997 NDUFA5Q16718 116 aa8.11□□□□□ -1.11
SDF4-203ENST00000403997 SNAPINO95295 136 aa8.1□□□□□ -1.11
SDF4-203ENST00000403997 SVBPQ8N300 66 aa8.1□□□□□ -1.11
SDF4-203ENST00000403997 C18orf32Q8TCD1 76 aa8.1□□□□□ -1.11
SDF4-203ENST00000403997 C22orf24Q9Y442 160 aa8.1□□□□□ -1.11
SDF4-203ENST00000403997 H3BRM9 83 aa8.09□□□□□ -1.11
SDF4-203ENST00000403997 A0A096LNJ9 63 aa8.08□□□□□ -1.12
SDF4-203ENST00000403997 H0Y9J4 135 aa8.08□□□□□ -1.12
SDF4-203ENST00000403997 RAB5BP61020 215 aa8.08□□□□□ -1.12
SDF4-203ENST00000403997 LBHQ53QV2 105 aaPredicted RBP8.08□□□□□ -1.12
SDF4-203ENST00000403997 URB1-AS1Q96HZ7 61 aa8.08□□□□□ -1.12
SDF4-203ENST00000403997 HBDP02042 147 aa8.07□□□□□ -1.12
SDF4-203ENST00000403997 PMCHL1Q16048 86 aa8.07□□□□□ -1.12
SDF4-203ENST00000403997 IGLC3P0DOY3 106 aa8.06□□□□□ -1.12
SDF4-203ENST00000403997 ATP5LO75964 103 aa8.05□□□□□ -1.12
SDF4-203ENST00000403997 MRPL55Q7Z7F7 128 aaKnown RBP8.05□□□□□ -1.12
SDF4-203ENST00000403997 PRR26Q8N8Z3 221 aa8.05□□□□□ -1.12
SDF4-203ENST00000403997 TP73-AS1Q9UF72 201 aa8.05□□□□□ -1.12
SDF4-203ENST00000403997 NUPR1O60356 82 aa8.04□□□□□ -1.12
SDF4-203ENST00000403997 ZNF22P17026 224 aaPredicted RBP8.04□□□□□ -1.12
SDF4-203ENST00000403997 BAGE3Q86Y29 109 aa8.04□□□□□ -1.12
SDF4-203ENST00000403997 IGLV5-39A0A0G2JS06 123 aa8.02□□□□□ -1.13
SDF4-203ENST00000403997 RPL37AP8A6NKH3 93 aa8.02□□□□□ -1.13
SDF4-203ENST00000403997 ZNF861PO60384 105 aa8.02□□□□□ -1.13
SDF4-203ENST00000403997 PFN2P35080 140 aa8.02□□□□□ -1.13
SDF4-203ENST00000403997 LINC00167Q96N53 147 aa8.02□□□□□ -1.13
SDF4-203ENST00000403997 YPEL4Q96NS1 127 aa8.02□□□□□ -1.13
SDF4-203ENST00000403997 KRTAP9-6A0A140TA67 174 aa8.01□□□□□ -1.13
SDF4-203ENST00000403997 GAGE10A6NGK3 116 aa8.01□□□□□ -1.13
SDF4-203ENST00000403997 C11orf86A6NJI1 115 aa8.01□□□□□ -1.13
SDF4-203ENST00000403997 TMEM170BQ5T4T1 132 aa8.01□□□□□ -1.13
SDF4-203ENST00000403997 IGLV1-50A0A075B6I6 118 aa8□□□□□ -1.13
SDF4-203ENST00000403997 KRTAP1-4P0C5Y4 121 aa8□□□□□ -1.13
SDF4-203ENST00000403997 NKAPP1Q8N9T2 125 aa8□□□□□ -1.13
SDF4-203ENST00000403997 CHCHD1Q96BP2 118 aaKnown RBP8□□□□□ -1.13
SDF4-203ENST00000403997 KRTAP9-2Q9BYQ4 174 aa8□□□□□ -1.13
SDF4-203ENST00000403997 CHTOPQ9Y3Y2 248 aaKnown RBP8□□□□□ -1.13
SDF4-203ENST00000403997 BCE1O60756 84 aa7.99□□□□□ -1.13
SDF4-203ENST00000403997 ZNF625Q96I27 306 aaPredicted RBP7.99□□□□□ -1.13
SDF4-203ENST00000403997 IGLV5-37A0A075B6J1 123 aa7.98□□□□□ -1.13
SDF4-203ENST00000403997 RPL28P46779 137 aaKnown RBP7.98□□□□□ -1.13
SDF4-203ENST00000403997 CBLN2Q8IUK8 224 aa7.98□□□□□ -1.13
SDF4-203ENST00000403997 IFI27L1Q96BM0 104 aa7.98□□□□□ -1.13
SDF4-203ENST00000403997 ERG28Q9UKR5 140 aa7.98□□□□□ -1.13
SDF4-203ENST00000403997 SND1-IT1Q9HBX3 110 aa7.97□□□□□ -1.13
SDF4-203ENST00000403997 SCO1O75880 301 aa7.96□□□□□ -1.14
SDF4-203ENST00000403997 RPL13AP40429 203 aaKnown RBP7.96□□□□□ -1.14
SDF4-203ENST00000403997 COX17Q14061 63 aa7.96□□□□□ -1.14
SDF4-203ENST00000403997 SFTA2Q6UW10 78 aa7.96□□□□□ -1.14
SDF4-203ENST00000403997 RNF213Q63HN8 5207 aa7.96□□□□□ -1.14
SDF4-203ENST00000403997 TRAV12-1A0A0B4J245 112 aa7.95□□□□□ -1.14
SDF4-203ENST00000403997 IGKV2-28A0A075B6P5 120 aa7.94□□□□□ -1.14
SDF4-203ENST00000403997 TMEM223A0PJW6 202 aa7.94□□□□□ -1.14
SDF4-203ENST00000403997 HSBP1O75506 76 aa7.94□□□□□ -1.14
SDF4-203ENST00000403997 IGKV2D-28P01615 120 aa7.94□□□□□ -1.14
SDF4-203ENST00000403997 UBE2AP49459 152 aa7.94□□□□□ -1.14
SDF4-203ENST00000403997 RPL24P83731 157 aaKnown RBP7.94□□□□□ -1.14
SDF4-203ENST00000403997 FAM19A2Q8N3H0 131 aa7.94□□□□□ -1.14
SDF4-203ENST00000403997 TRGC2P03986 189 aa7.93□□□□□ -1.14
SDF4-203ENST00000403997 VPREB1P12018 145 aa7.93□□□□□ -1.14
SDF4-203ENST00000403997 LINC00158P58513 81 aa7.93□□□□□ -1.14
SDF4-203ENST00000403997 LRP2P98164 4655 aa7.92□□□□□ -1.14
SDF4-203ENST00000403997 SLC7A5P1Q8MH63 180 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms