RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 AKAP9Q99996 3911 aa9.79□□□□□ -0.84
APOB-202ENST00000399256 USP17L23D6RBM5 183 aa9.78□□□□□ -0.84
APOB-202ENST00000399256 FSHBP01225 129 aa9.78□□□□□ -0.84
APOB-202ENST00000399256 SERP2Q8N6R1 65 aa9.78□□□□□ -0.84
APOB-202ENST00000399256 TRGV4A0A0C4DH28 118 aa9.78□□□□□ -0.84
APOB-202ENST00000399256 WFDC11Q8NEX6 87 aa9.78□□□□□ -0.84
APOB-202ENST00000399256 ORMDL1Q9P0S3 153 aa9.78□□□□□ -0.84
APOB-202ENST00000399256 HECTD1Q9ULT8 2610 aa9.77□□□□□ -0.85
APOB-202ENST00000399256 SS18Q15532 418 aa9.77□□□□□ -0.85
APOB-202ENST00000399256 ITPR3Q14573 2671 aa9.77□□□□□ -0.85
APOB-202ENST00000399256 TRBV6-4A0A1B0GX49 114 aa9.77□□□□□ -0.85
APOB-202ENST00000399256 WFDC10AQ9H1F0 79 aa9.77□□□□□ -0.85
APOB-202ENST00000399256 A0A087WZ39 114 aa9.76□□□□□ -0.85
APOB-202ENST00000399256 UPK3BQ9BT76 320 aa9.76□□□□□ -0.85
APOB-202ENST00000399256 CCDC168Q8NDH2 2452 aa9.76□□□□□ -0.85
APOB-202ENST00000399256 PLAC8L1A1L4L8 177 aa9.76□□□□□ -0.85
APOB-202ENST00000399256 HILS1P60008 231 aa9.76□□□□□ -0.85
APOB-202ENST00000399256 C6orf226Q5I0X4 101 aa9.76□□□□□ -0.85
APOB-202ENST00000399256 WFDC9Q8NEX5 89 aa9.76□□□□□ -0.85
APOB-202ENST00000399256 JMJD1CQ15652 2540 aa9.76□□□□□ -0.85
APOB-202ENST00000399256 TRBV6-8A0A0A6YYG3 113 aa9.76□□□□□ -0.85
APOB-202ENST00000399256 RPL35AP18077 110 aaKnown RBP9.76□□□□□ -0.85
APOB-202ENST00000399256 GIG44P09565 113 aaPredicted RBP9.75□□□□□ -0.85
APOB-202ENST00000399256 PRR3P79522 188 aaKnown RBP9.75□□□□□ -0.85
APOB-202ENST00000399256 SMIM9A6NGZ8 99 aa9.74□□□□□ -0.85
APOB-202ENST00000399256 CCKP06307 115 aa9.74□□□□□ -0.85
APOB-202ENST00000399256 DSCR8Q96T75 97 aa9.74□□□□□ -0.85
APOB-202ENST00000399256 XCL1P47992 114 aa9.73□□□□□ -0.85
APOB-202ENST00000399256 C16orf74Q96GX8 76 aa9.73□□□□□ -0.85
APOB-202ENST00000399256 TEX15Q9BXT5 2789 aa9.73□□□□□ -0.85
APOB-202ENST00000399256 TRAV25A0A0B4J276 109 aa9.73□□□□□ -0.85
APOB-202ENST00000399256 LY6G6DO95868 133 aa9.73□□□□□ -0.85
APOB-202ENST00000399256 TLN2Q9Y4G6 2542 aa9.73□□□□□ -0.85
APOB-202ENST00000399256 LINC00959A0A1B0GUT2 108 aa9.73□□□□□ -0.85
APOB-202ENST00000399256 TMEM258P61165 79 aa9.73□□□□□ -0.85
APOB-202ENST00000399256 CLPSL2Q6UWE3 100 aa9.73□□□□□ -0.85
APOB-202ENST00000399256 DPH3Q96FX2 82 aa9.73□□□□□ -0.85
APOB-202ENST00000399256 NIPBLQ6KC79 2804 aaeCLIP9.73□□□□□ -0.85
APOB-202ENST00000399256 RPS28P62857 69 aaKnown RBP9.72□□□□□ -0.85
APOB-202ENST00000399256 SETXQ7Z333 2677 aaKnown RBP9.72□□□□□ -0.85
APOB-202ENST00000399256 RNASE1P07998 156 aaKnown RBP9.71□□□□□ -0.85
APOB-202ENST00000399256 FLNAP21333 2647 aaKnown RBP9.71□□□□□ -0.85
APOB-202ENST00000399256 FHL2Q14192 279 aa9.71□□□□□ -0.85
APOB-202ENST00000399256 C5orf47Q569G3 176 aa9.71□□□□□ -0.85
APOB-202ENST00000399256 TRAV23DV6A0A075B6W5 121 aa9.71□□□□□ -0.86
APOB-202ENST00000399256 CCL24O00175 119 aa9.7□□□□□ -0.86
APOB-202ENST00000399256 OXTP01178 125 aa9.7□□□□□ -0.86
APOB-202ENST00000399256 TMEM86BQ8N661 226 aa9.7□□□□□ -0.86
APOB-202ENST00000399256 NANOS2P60321 138 aaKnown RBP9.7□□□□□ -0.86
APOB-202ENST00000399256 FAM19A1Q7Z5A9 133 aa9.7□□□□□ -0.86
APOB-202ENST00000399256 Q8N814 137 aa9.69□□□□□ -0.86
APOB-202ENST00000399256 GHRHP01286 108 aa9.69□□□□□ -0.86
APOB-202ENST00000399256 ENHOQ6UWT2 76 aa9.69□□□□□ -0.86
APOB-202ENST00000399256 LINC00167Q96N53 147 aa9.68□□□□□ -0.86
APOB-202ENST00000399256 JMJD7-PLA2G4BH0Y9G9 81 aa9.67□□□□□ -0.86
APOB-202ENST00000399256 KRTAP1-1Q07627 177 aa9.67□□□□□ -0.86
APOB-202ENST00000399256 DEFB130BP0DP73 79 aa9.67□□□□□ -0.86
APOB-202ENST00000399256 DEFB130AP0DP74 79 aa9.67□□□□□ -0.86
APOB-202ENST00000399256 S100A7L2Q5SY68 101 aa9.67□□□□□ -0.86
APOB-202ENST00000399256 SETD2Q9BYW2 2564 aaPredicted RBP9.66□□□□□ -0.86
APOB-202ENST00000399256 TMEM256-PLSCR3K7ERE1 68 aa9.66□□□□□ -0.86
APOB-202ENST00000399256 A0A096LPF7 62 aa9.65□□□□□ -0.86
APOB-202ENST00000399256 Q8IZM0 81 aa9.65□□□□□ -0.86
APOB-202ENST00000399256 NF1P21359 2839 aa9.65□□□□□ -0.86
APOB-202ENST00000399256 SONP18583 2426 aaKnown RBP9.65□□□□□ -0.86
APOB-202ENST00000399256 CSNK1G2-AS1Q8NCQ2 148 aa9.65□□□□□ -0.87
APOB-202ENST00000399256 ANK3Q12955 4377 aaKnown RBP9.64□□□□□ -0.87
APOB-202ENST00000399256 GYPEP15421 78 aa9.64□□□□□ -0.87
APOB-202ENST00000399256 C9orf116Q5BN46 136 aaPredicted RBP9.64□□□□□ -0.87
APOB-202ENST00000399256 ATP5EP2Q5VTU8 51 aa9.63□□□□□ -0.87
APOB-202ENST00000399256 ACANP16112 2415 aa9.63□□□□□ -0.87
APOB-202ENST00000399256 C6orf99Q4VX62 202 aa9.63□□□□□ -0.87
APOB-202ENST00000399256 UBL5Q9BZL1 73 aa9.63□□□□□ -0.87
APOB-202ENST00000399256 C4orf26Q17RF5 130 aa9.62□□□□□ -0.87
APOB-202ENST00000399256 C20orf197Q8N268 126 aa9.62□□□□□ -0.87
APOB-202ENST00000399256 Q8NDZ9 215 aa9.62□□□□□ -0.87
APOB-202ENST00000399256 NOTCH2Q04721 2471 aa9.62□□□□□ -0.87
APOB-202ENST00000399256 C19orf73Q9NVV2 129 aa9.61□□□□□ -0.87
APOB-202ENST00000399256 IGLV10-54A0A075B6I4 117 aa9.61□□□□□ -0.87
APOB-202ENST00000399256 DNAJC9-AS1A6NH13 148 aa9.61□□□□□ -0.87
APOB-202ENST00000399256 OTOGQ6ZRI0 2925 aa9.61□□□□□ -0.87
APOB-202ENST00000399256 LYPD5Q6UWN5 251 aa9.6□□□□□ -0.87
APOB-202ENST00000399256 M0R2N4 97 aa9.59□□□□□ -0.87
APOB-202ENST00000399256 NDUFC2O95298 119 aa9.59□□□□□ -0.87
APOB-202ENST00000399256 KIAA0087Q14695 138 aa9.59□□□□□ -0.87
APOB-202ENST00000399256 LINC00269Q8N2A0 174 aa9.59□□□□□ -0.87
APOB-202ENST00000399256 FN1P02751 2386 aaKnown RBP9.59□□□□□ -0.87
APOB-202ENST00000399256 CMC4P56277 68 aaPredicted RBP9.58□□□□□ -0.88
APOB-202ENST00000399256 Q8N3U1 123 aa9.58□□□□□ -0.88
APOB-202ENST00000399256 HRCT1Q6UXD1 115 aa9.58□□□□□ -0.88
APOB-202ENST00000399256 A0A1B0GUV1 79 aa9.58□□□□□ -0.88
APOB-202ENST00000399256 Q5XG85 94 aa9.58□□□□□ -0.88
APOB-202ENST00000399256 LAMTOR3Q9UHA4 124 aa9.57□□□□□ -0.88
APOB-202ENST00000399256 RBM3P98179 157 aaKnown RBP9.57□□□□□ -0.88
APOB-202ENST00000399256 LINC00575Q6W349 94 aa9.57□□□□□ -0.88
APOB-202ENST00000399256 Q6ZQT0 140 aa9.57□□□□□ -0.88
APOB-202ENST00000399256 SMR3AQ99954 134 aa9.57□□□□□ -0.88
APOB-202ENST00000399256 ESM1Q9NQ30 184 aa9.57□□□□□ -0.88
APOB-202ENST00000399256 IGLV1-51P01701 117 aa9.56□□□□□ -0.88
APOB-202ENST00000399256 CHCHD10Q8WYQ3 142 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms