RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 ATP5G1P05496 136 aa10.59□□□□□ -0.71
COL25A1-201ENST00000399126 TMEM170BQ5T4T1 132 aa10.59□□□□□ -0.71
COL25A1-201ENST00000399126 A0A0J9YY99 117 aa10.58□□□□□ -0.72
COL25A1-201ENST00000399126 DAD1P61803 113 aa10.58□□□□□ -0.72
COL25A1-201ENST00000399126 HUWE1Q7Z6Z7 4374 aaKnown RBP10.57□□□□□ -0.72
COL25A1-201ENST00000399126 CRYGAP11844 174 aa10.57□□□□□ -0.72
COL25A1-201ENST00000399126 LINC01600Q96MT4 127 aa10.57□□□□□ -0.72
COL25A1-201ENST00000399126 FAM240AA0A1B0GVK7 77 aa10.56□□□□□ -0.72
COL25A1-201ENST00000399126 HTN3P15516 51 aa10.56□□□□□ -0.72
COL25A1-201ENST00000399126 DPH3Q96FX2 82 aa10.56□□□□□ -0.72
COL25A1-201ENST00000399126 PRO0255Q9UI72 69 aa10.56□□□□□ -0.72
COL25A1-201ENST00000399126 SRSF9Q13242 221 aaKnown RBP eCLIP10.56□□□□□ -0.72
COL25A1-201ENST00000399126 VSIG2Q96IQ7 327 aa10.56□□□□□ -0.72
COL25A1-201ENST00000399126 IGHV3-64A0A075B6Q5 118 aa10.55□□□□□ -0.72
COL25A1-201ENST00000399126 ZNF22P17026 224 aaPredicted RBP10.55□□□□□ -0.72
COL25A1-201ENST00000399126 COX7CP15954 63 aa10.55□□□□□ -0.72
COL25A1-201ENST00000399126 TSPEAR-AS2P59090 65 aa10.55□□□□□ -0.72
COL25A1-201ENST00000399126 PMAIP1Q13794 54 aa10.55□□□□□ -0.72
COL25A1-201ENST00000399126 PAPPA-AS1Q5QFB9 102 aa10.55□□□□□ -0.72
COL25A1-201ENST00000399126 PAX4O43316 350 aa10.54□□□□□ -0.72
COL25A1-201ENST00000399126 SPART-AS1P0CW21 52 aa10.54□□□□□ -0.72
COL25A1-201ENST00000399126 UBE2WQ96B02 151 aa10.54□□□□□ -0.72
COL25A1-201ENST00000399126 TMEM243Q9BU79 118 aa10.54□□□□□ -0.72
COL25A1-201ENST00000399126 TMEM258P61165 79 aa10.54□□□□□ -0.72
COL25A1-201ENST00000399126 DNHD1Q96M86 4753 aa10.54□□□□□ -0.72
COL25A1-201ENST00000399126 TRBV6-8A0A0A6YYG3 113 aa10.53□□□□□ -0.72
COL25A1-201ENST00000399126 TEX49A0A1B0GTD5 131 aa10.53□□□□□ -0.72
COL25A1-201ENST00000399126 UBE2L6O14933 153 aa10.52□□□□□ -0.72
COL25A1-201ENST00000399126 TRACP01848 142 aa10.52□□□□□ -0.72
COL25A1-201ENST00000399126 MRPS36P82909 103 aaKnown RBP10.52□□□□□ -0.72
COL25A1-201ENST00000399126 TIMM21Q9BVV7 248 aa10.52□□□□□ -0.72
COL25A1-201ENST00000399126 COL7A1Q02388 2944 aa10.52□□□□□ -0.73
COL25A1-201ENST00000399126 TMEM223A0PJW6 202 aa10.51□□□□□ -0.73
COL25A1-201ENST00000399126 CDC42SE2Q9NRR3 84 aa10.51□□□□□ -0.73
COL25A1-201ENST00000399126 IGLV4-60A0A075B6I1 120 aa10.51□□□□□ -0.73
COL25A1-201ENST00000399126 TRAV8-3A0A0A6YYJ7 113 aa10.5□□□□□ -0.73
COL25A1-201ENST00000399126 TRAV13-1A0A0B4J241 112 aa10.5□□□□□ -0.73
COL25A1-201ENST00000399126 COX6A2Q02221 97 aa10.5□□□□□ -0.73
COL25A1-201ENST00000399126 PLEKHB2Q96CS7 222 aa10.5□□□□□ -0.73
COL25A1-201ENST00000399126 A0A0A0MQY5 61 aa10.5□□□□□ -0.73
COL25A1-201ENST00000399126 ZNF815PA8K554 130 aa10.5□□□□□ -0.73
COL25A1-201ENST00000399126 HERVK_113P61574 105 aa10.5□□□□□ -0.73
COL25A1-201ENST00000399126 K7EIL1 84 aa10.49□□□□□ -0.73
COL25A1-201ENST00000399126 J3QQQ9 107 aa10.49□□□□□ -0.73
COL25A1-201ENST00000399126 ATXN8Q156A1 80 aa10.48□□□□□ -0.73
COL25A1-201ENST00000399126 CDKN2A-AS1Q9UH64 79 aa10.48□□□□□ -0.73
COL25A1-201ENST00000399126 PRO1854Q9UHT4 67 aa10.48□□□□□ -0.73
COL25A1-201ENST00000399126 DNAH9Q9NYC9 4486 aa10.48□□□□□ -0.73
COL25A1-201ENST00000399126 IGKV3OR2-268A0A0C4DH90 116 aa10.48□□□□□ -0.73
COL25A1-201ENST00000399126 A0A0J9YWU9 116 aa10.48□□□□□ -0.73
COL25A1-201ENST00000399126 TRBV10-2A0A0K0K1G8 114 aa10.48□□□□□ -0.73
COL25A1-201ENST00000399126 LINC00242Q5T6M2 205 aa10.48□□□□□ -0.73
COL25A1-201ENST00000399126 SCGB1D4Q6XE38 83 aa10.48□□□□□ -0.73
COL25A1-201ENST00000399126 Q6ZTC4 211 aa10.47□□□□□ -0.73
COL25A1-201ENST00000399126 Q8N3U1 123 aa10.47□□□□□ -0.73
COL25A1-201ENST00000399126 hADV29S1A0JD25 119 aa10.46□□□□□ -0.73
COL25A1-201ENST00000399126 CFC1BP0CG36 223 aa10.46□□□□□ -0.73
COL25A1-201ENST00000399126 CFC1P0CG37 223 aa10.46□□□□□ -0.73
COL25A1-201ENST00000399126 DEFB121Q5J5C9 76 aa10.46□□□□□ -0.74
COL25A1-201ENST00000399126 STAB2Q8WWQ8 2551 aa10.46□□□□□ -0.74
COL25A1-201ENST00000399126 IGHV3-30-3P0DP02 117 aa10.45□□□□□ -0.74
COL25A1-201ENST00000399126 PFN2P35080 140 aa10.45□□□□□ -0.74
COL25A1-201ENST00000399126 LEPROTO15243 131 aa10.44□□□□□ -0.74
COL25A1-201ENST00000399126 H7C423 109 aa10.44□□□□□ -0.74
COL25A1-201ENST00000399126 NANOS2P60321 138 aaKnown RBP10.44□□□□□ -0.74
COL25A1-201ENST00000399126 DSCR8Q96T75 97 aa10.44□□□□□ -0.74
COL25A1-201ENST00000399126 LGALS3P17931 250 aaKnown RBP10.43□□□□□ -0.74
COL25A1-201ENST00000399126 ACYP1P07311 99 aa10.43□□□□□ -0.74
COL25A1-201ENST00000399126 MRPL55Q7Z7F7 128 aaKnown RBP10.43□□□□□ -0.74
COL25A1-201ENST00000399126 C11orf68Q9H3H3 251 aaKnown RBP10.43□□□□□ -0.74
COL25A1-201ENST00000399126 IGLV5-45A0A087WSX0 123 aa10.42□□□□□ -0.74
COL25A1-201ENST00000399126 ATOX1O00244 68 aa10.42□□□□□ -0.74
COL25A1-201ENST00000399126 C2orf82Q6UX34 121 aa10.42□□□□□ -0.74
COL25A1-201ENST00000399126 IGHV1-58A0A0C4DH39 117 aa10.42□□□□□ -0.74
COL25A1-201ENST00000399126 CLPSL2Q6UWE3 100 aa10.42□□□□□ -0.74
COL25A1-201ENST00000399126 CXCL5P42830 114 aa10.41□□□□□ -0.74
COL25A1-201ENST00000399126 H3BT86 120 aa10.41□□□□□ -0.74
COL25A1-201ENST00000399126 KPRPQ5T749 579 aaPredicted RBP10.41□□□□□ -0.74
COL25A1-201ENST00000399126 LINC00643Q86TS7 51 aa10.41□□□□□ -0.74
COL25A1-201ENST00000399126 ICOSQ9Y6W8 199 aa10.41□□□□□ -0.74
COL25A1-201ENST00000399126 FAM19A3Q7Z5A8 133 aa10.4□□□□□ -0.74
COL25A1-201ENST00000399126 Q9H8V8 135 aa10.39□□□□□ -0.75
COL25A1-201ENST00000399126 IGHV3-30P01768 117 aa10.39□□□□□ -0.75
COL25A1-201ENST00000399126 IGHV3-33P01772 117 aa10.39□□□□□ -0.75
COL25A1-201ENST00000399126 IGHV3-30-5P0DP03 117 aa10.39□□□□□ -0.75
COL25A1-201ENST00000399126 TM2D3Q9BRN9 247 aa10.39□□□□□ -0.75
COL25A1-201ENST00000399126 SMIM1B2RUZ4 78 aa10.38□□□□□ -0.75
COL25A1-201ENST00000399126 CYSTM1Q9H1C7 97 aa10.38□□□□□ -0.75
COL25A1-201ENST00000399126 C5orf38Q86SI9 138 aa10.37□□□□□ -0.75
COL25A1-201ENST00000399126 PRKDCP78527 4128 aaKnown RBP10.37□□□□□ -0.75
COL25A1-201ENST00000399126 NDUFA12Q9UI09 145 aa10.37□□□□□ -0.75
COL25A1-201ENST00000399126 LINC00959A0A1B0GUT2 108 aa10.36□□□□□ -0.75
COL25A1-201ENST00000399126 A0A1B0GUV1 79 aa10.36□□□□□ -0.75
COL25A1-201ENST00000399126 IGLV5-39A0A0G2JS06 123 aa10.36□□□□□ -0.75
COL25A1-201ENST00000399126 A0A0J9YXY3 114 aa10.36□□□□□ -0.75
COL25A1-201ENST00000399126 HIST1H4AP62805 103 aaKnown RBP10.36□□□□□ -0.75
COL25A1-201ENST00000399126 LINC00269Q8N2A0 174 aa10.36□□□□□ -0.75
COL25A1-201ENST00000399126 LYSTQ99698 3801 aa10.36□□□□□ -0.75
COL25A1-201ENST00000399126 LYPD5Q6UWN5 251 aa10.35□□□□□ -0.75
COL25A1-201ENST00000399126 DEFB131BA0A096LNP1 70 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms