RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 BAGE3Q86Y29 109 aa5.34□□□□□ -1.55
BRCC3-205ENST00000399026 CHAC1Q9BUX1 264 aa5.34□□□□□ -1.55
BRCC3-205ENST00000399026 LINC01549A6NIU2 74 aa5.33□□□□□ -1.56
BRCC3-205ENST00000399026 SERF1AO75920 110 aa5.33□□□□□ -1.56
BRCC3-205ENST00000399026 NDUFA6P56556 154 aa5.33□□□□□ -1.56
BRCC3-205ENST00000399026 HERVK_113P63121 156 aa5.33□□□□□ -1.56
BRCC3-205ENST00000399026 PMVKQ15126 192 aa5.33□□□□□ -1.56
BRCC3-205ENST00000399026 PDZD11Q5EBL8 140 aa5.33□□□□□ -1.56
BRCC3-205ENST00000399026 FAM19A3Q7Z5A8 133 aa5.33□□□□□ -1.56
BRCC3-205ENST00000399026 LINC00469Q8N7U9 141 aa5.33□□□□□ -1.56
BRCC3-205ENST00000399026 SPACA4Q8TDM5 124 aa5.33□□□□□ -1.56
BRCC3-205ENST00000399026 CHCHD1Q96BP2 118 aaKnown RBP5.33□□□□□ -1.56
BRCC3-205ENST00000399026 CST9LQ9H4G1 147 aa5.33□□□□□ -1.56
BRCC3-205ENST00000399026 GEMIN7Q9H840 131 aaKnown RBP5.33□□□□□ -1.56
BRCC3-205ENST00000399026 CDKN2A-AS1Q9UH64 79 aa5.33□□□□□ -1.56
BRCC3-205ENST00000399026 TINCRA0A1B0GVN0 87 aa5.32□□□□□ -1.56
BRCC3-205ENST00000399026 EPM2AB3EWF7 344 aa5.32□□□□□ -1.56
BRCC3-205ENST00000399026 ATP6V1G1O75348 118 aa5.32□□□□□ -1.56
BRCC3-205ENST00000399026 HSBP1O75506 76 aa5.32□□□□□ -1.56
BRCC3-205ENST00000399026 RPL18AQ02543 176 aaKnown RBP5.32□□□□□ -1.56
BRCC3-205ENST00000399026 MAJINQ3KP22 176 aa5.32□□□□□ -1.56
BRCC3-205ENST00000399026 C10orf25Q5T742 122 aa5.32□□□□□ -1.56
BRCC3-205ENST00000399026 C2orf82Q6UX34 121 aa5.32□□□□□ -1.56
BRCC3-205ENST00000399026 FAM19A2Q8N3H0 131 aa5.32□□□□□ -1.56
BRCC3-205ENST00000399026 C2orf48Q96LS8 159 aa5.32□□□□□ -1.56
BRCC3-205ENST00000399026 TOMM7Q9P0U1 55 aa5.32□□□□□ -1.56
BRCC3-205ENST00000399026 TMA7Q9Y2S6 64 aaKnown RBP5.32□□□□□ -1.56
BRCC3-205ENST00000399026 KRTAP23-1A1A580 65 aa5.31□□□□□ -1.56
BRCC3-205ENST00000399026 SMIM1B2RUZ4 78 aa5.31□□□□□ -1.56
BRCC3-205ENST00000399026 NDUFA1O15239 70 aa5.31□□□□□ -1.56
BRCC3-205ENST00000399026 SPINK8P0C7L1 97 aa5.31□□□□□ -1.56
BRCC3-205ENST00000399026 SEC11AP67812 179 aa5.31□□□□□ -1.56
BRCC3-205ENST00000399026 GAGE2BQ13066 116 aa5.31□□□□□ -1.56
BRCC3-205ENST00000399026 CIRBPQ14011 172 aaKnown RBP5.31□□□□□ -1.56
BRCC3-205ENST00000399026 KIAA0087Q14695 138 aa5.31□□□□□ -1.56
BRCC3-205ENST00000399026 PACRGQ96M98 296 aaPredicted RBP5.31□□□□□ -1.56
BRCC3-205ENST00000399026 C6orf48Q9UBA6 75 aa5.31□□□□□ -1.56
BRCC3-205ENST00000399026 IGLV5-45A0A087WSX0 123 aa5.3□□□□□ -1.56
BRCC3-205ENST00000399026 A0A087WYN8 130 aa5.3□□□□□ -1.56
BRCC3-205ENST00000399026 LOC107984640A0A0U1RRK4 108 aa5.3□□□□□ -1.56
BRCC3-205ENST00000399026 H0Y8G0 127 aa5.3□□□□□ -1.56
BRCC3-205ENST00000399026 NUPR1O60356 82 aa5.3□□□□□ -1.56
BRCC3-205ENST00000399026 ATP5LO75964 103 aa5.3□□□□□ -1.56
BRCC3-205ENST00000399026 PRSS2P07478 247 aa5.3□□□□□ -1.56
BRCC3-205ENST00000399026 IGLC3P0DOY3 106 aa5.3□□□□□ -1.56
BRCC3-205ENST00000399026 UNQ6190/PRO20217Q6UXQ8 127 aa5.3□□□□□ -1.56
BRCC3-205ENST00000399026 PKHD1L1Q86WI1 4243 aa5.3□□□□□ -1.56
BRCC3-205ENST00000399026 HIST1H2BKO60814 126 aa5.29□□□□□ -1.56
BRCC3-205ENST00000399026 HIST1H2BJP06899 126 aa5.29□□□□□ -1.56
BRCC3-205ENST00000399026 ZNF22P17026 224 aaPredicted RBP5.29□□□□□ -1.56
BRCC3-205ENST00000399026 HIST1H2BOP23527 126 aa5.29□□□□□ -1.56
BRCC3-205ENST00000399026 HIST1H2BBP33778 126 aa5.29□□□□□ -1.56
BRCC3-205ENST00000399026 PTTG1IPP53801 180 aa5.29□□□□□ -1.56
BRCC3-205ENST00000399026 HIST1H2BDP58876 126 aa5.29□□□□□ -1.56
BRCC3-205ENST00000399026 HIST1H2BCP62807 126 aa5.29□□□□□ -1.56
BRCC3-205ENST00000399026 HIST2H2BEQ16778 126 aa5.29□□□□□ -1.56
BRCC3-205ENST00000399026 C9orf116Q5BN46 136 aaPredicted RBP5.29□□□□□ -1.56
BRCC3-205ENST00000399026 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.29□□□□□ -1.56
BRCC3-205ENST00000399026 Q8IZM0 81 aa5.29□□□□□ -1.56
BRCC3-205ENST00000399026 LINC01561Q8N1V8 128 aa5.29□□□□□ -1.56
BRCC3-205ENST00000399026 HIST1H2BHQ93079 126 aa5.29□□□□□ -1.56
BRCC3-205ENST00000399026 IFI27L1Q96BM0 104 aa5.29□□□□□ -1.56
BRCC3-205ENST00000399026 DPH3Q96FX2 82 aa5.29□□□□□ -1.56
BRCC3-205ENST00000399026 HIST1H2BNQ99877 126 aa5.29□□□□□ -1.56
BRCC3-205ENST00000399026 HIST1H2BMQ99879 126 aa5.29□□□□□ -1.56
BRCC3-205ENST00000399026 MRPL35Q9NZE8 188 aaKnown RBP5.29□□□□□ -1.56
BRCC3-205ENST00000399026 SRRM2Q9UQ35 2752 aaKnown RBP5.28□□□□□ -1.56
BRCC3-205ENST00000399026 C11orf86A6NJI1 115 aa5.28□□□□□ -1.56
BRCC3-205ENST00000399026 STPG4Q8N801 248 aa5.28□□□□□ -1.56
BRCC3-205ENST00000399026 PKIGQ9Y2B9 76 aa5.28□□□□□ -1.56
BRCC3-205ENST00000399026 CHTOPQ9Y3Y2 248 aaKnown RBP5.28□□□□□ -1.56
BRCC3-205ENST00000399026 H3BRM9 83 aa5.27□□□□□ -1.57
BRCC3-205ENST00000399026 LEPROTL1O95214 131 aa5.27□□□□□ -1.57
BRCC3-205ENST00000399026 FABP4P15090 132 aa5.27□□□□□ -1.57
BRCC3-205ENST00000399026 CKS1BP61024 79 aa5.27□□□□□ -1.57
BRCC3-205ENST00000399026 GAGE2EQ4V326 116 aa5.27□□□□□ -1.57
BRCC3-205ENST00000399026 C6orf226Q5I0X4 101 aa5.27□□□□□ -1.57
BRCC3-205ENST00000399026 COX7B2Q8TF08 81 aa5.27□□□□□ -1.57
BRCC3-205ENST00000399026 PLAC8Q9NZF1 115 aa5.27□□□□□ -1.57
BRCC3-205ENST00000399026 GAGE2DQ9UEU5 116 aa5.27□□□□□ -1.57
BRCC3-205ENST00000399026 TRAV12-1A0A0B4J245 112 aa5.26□□□□□ -1.57
BRCC3-205ENST00000399026 TRBV30A0A0K0K1B3 111 aa5.26□□□□□ -1.57
BRCC3-205ENST00000399026 F8WDY8 70 aa5.26□□□□□ -1.57
BRCC3-205ENST00000399026 KRTAP10-4P60372 401 aaPredicted RBP5.26□□□□□ -1.57
BRCC3-205ENST00000399026 RPL37AP61513 92 aaKnown RBP5.26□□□□□ -1.57
BRCC3-205ENST00000399026 TMEM170BQ5T4T1 132 aa5.26□□□□□ -1.57
BRCC3-205ENST00000399026 Q6ZRP5 223 aa5.26□□□□□ -1.57
BRCC3-205ENST00000399026 LINC00474Q9P2X8 69 aa5.26□□□□□ -1.57
BRCC3-205ENST00000399026 IGLV5-39A0A0G2JS06 123 aa5.25□□□□□ -1.57
BRCC3-205ENST00000399026 FAM168BA1KXE4 195 aa5.25□□□□□ -1.57
BRCC3-205ENST00000399026 F8VRH5 84 aa5.25□□□□□ -1.57
BRCC3-205ENST00000399026 INAFM2P0DMQ5 153 aa5.25□□□□□ -1.57
BRCC3-205ENST00000399026 S100A1P23297 94 aa5.25□□□□□ -1.57
BRCC3-205ENST00000399026 FAM19A5Q7Z5A7 132 aaPredicted RBP5.25□□□□□ -1.57
BRCC3-205ENST00000399026 MYCBP2O75592 4640 aa5.25□□□□□ -1.57
BRCC3-205ENST00000399026 A0A1W2PNN7 141 aa5.24□□□□□ -1.57
BRCC3-205ENST00000399026 NDUFC2-KCTD14E9PQ53 114 aa5.24□□□□□ -1.57
BRCC3-205ENST00000399026 TLX1NBP0CAT3 122 aa5.24□□□□□ -1.57
BRCC3-205ENST00000399026 CXCL5P42830 114 aa5.24□□□□□ -1.57
BRCC3-205ENST00000399026 ODF1Q14990 250 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms