RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 PIEZO2Q9H5I5 2752 aa3.59□□□□□ -1.83
SMAD4-202ENST00000398417 CHD8Q9HCK8 2581 aa3.59□□□□□ -1.84
SMAD4-202ENST00000398417 IGLV10-54A0A075B6I4 117 aa3.59□□□□□ -1.84
SMAD4-202ENST00000398417 SMCPP49901 116 aaPredicted RBP3.59□□□□□ -1.84
SMAD4-202ENST00000398417 SPAG11BQ08648 103 aa3.59□□□□□ -1.84
SMAD4-202ENST00000398417 SPAG11AQ6PDA7 123 aa3.59□□□□□ -1.84
SMAD4-202ENST00000398417 UBE2D4Q9Y2X8 147 aa3.59□□□□□ -1.84
SMAD4-202ENST00000398417 NDUFAF8A1L188 74 aa3.59□□□□□ -1.84
SMAD4-202ENST00000398417 ZNF292O60281 2723 aa3.58□□□□□ -1.84
SMAD4-202ENST00000398417 DNAJC9-AS1A6NH13 148 aa3.58□□□□□ -1.84
SMAD4-202ENST00000398417 BRI3O95415 125 aa3.58□□□□□ -1.84
SMAD4-202ENST00000398417 CCL24O00175 119 aa3.58□□□□□ -1.84
SMAD4-202ENST00000398417 IGLV7-43P04211 117 aa3.58□□□□□ -1.84
SMAD4-202ENST00000398417 LUZP6Q538Z0 58 aa3.58□□□□□ -1.84
SMAD4-202ENST00000398417 ACYP2P14621 99 aa3.58□□□□□ -1.84
SMAD4-202ENST00000398417 C15orf53Q8NAA6 179 aa3.58□□□□□ -1.84
SMAD4-202ENST00000398417 TLN2Q9Y4G6 2542 aa3.58□□□□□ -1.84
SMAD4-202ENST00000398417 IGKV2-28A0A075B6P5 120 aa3.58□□□□□ -1.84
SMAD4-202ENST00000398417 IGKV2D-28P01615 120 aa3.58□□□□□ -1.84
SMAD4-202ENST00000398417 AKAP9Q99996 3911 aa3.58□□□□□ -1.84
SMAD4-202ENST00000398417 TRBV10-2A0A0K0K1G8 114 aa3.58□□□□□ -1.84
SMAD4-202ENST00000398417 IGHV3-33P01772 117 aa3.58□□□□□ -1.84
SMAD4-202ENST00000398417 POM121L12Q8N7R1 296 aa3.58□□□□□ -1.84
SMAD4-202ENST00000398417 C5orf38Q86SI9 138 aa3.57□□□□□ -1.84
SMAD4-202ENST00000398417 MAP1AP78559 2803 aaPredicted RBP3.57□□□□□ -1.84
SMAD4-202ENST00000398417 NDUFA7O95182 113 aa3.57□□□□□ -1.84
SMAD4-202ENST00000398417 UBE2D1P51668 147 aa3.57□□□□□ -1.84
SMAD4-202ENST00000398417 CMC4P56277 68 aaPredicted RBP3.57□□□□□ -1.84
SMAD4-202ENST00000398417 DCHS2Q6V1P9 2916 aa3.57□□□□□ -1.84
SMAD4-202ENST00000398417 hDV103S1A0JD37 113 aa3.57□□□□□ -1.84
SMAD4-202ENST00000398417 ODF3L2Q3SX64 289 aa3.57□□□□□ -1.84
SMAD4-202ENST00000398417 ATP6V0E2Q8NHE4 81 aa3.57□□□□□ -1.84
SMAD4-202ENST00000398417 H0Y9J4 135 aa3.57□□□□□ -1.84
SMAD4-202ENST00000398417 COX6A2Q02221 97 aa3.57□□□□□ -1.84
SMAD4-202ENST00000398417 LRRC75A-AS1Q8N1F1 130 aa3.57□□□□□ -1.84
SMAD4-202ENST00000398417 NDUFB1O75438 58 aa3.57□□□□□ -1.84
SMAD4-202ENST00000398417 LINC00694P0DN24 101 aa3.57□□□□□ -1.84
SMAD4-202ENST00000398417 ADAMTSL4-AS1Q5T5F5 129 aa3.57□□□□□ -1.84
SMAD4-202ENST00000398417 C8orf17Q9NRJ1 99 aa3.57□□□□□ -1.84
SMAD4-202ENST00000398417 IGKV2D-30A0A075B6S6 120 aa3.56□□□□□ -1.84
SMAD4-202ENST00000398417 TEX49A0A1B0GTD5 131 aa3.56□□□□□ -1.84
SMAD4-202ENST00000398417 NCR3O14931 201 aa3.56□□□□□ -1.84
SMAD4-202ENST00000398417 DEFB4AO15263 64 aa3.56□□□□□ -1.84
SMAD4-202ENST00000398417 BBC3Q96PG8 261 aaPredicted RBP3.56□□□□□ -1.84
SMAD4-202ENST00000398417 UTP20O75691 2785 aaKnown RBP3.56□□□□□ -1.84
SMAD4-202ENST00000398417 PYGO1Q9Y3Y4 419 aa3.56□□□□□ -1.84
SMAD4-202ENST00000398417 BAHCC1Q9P281 2608 aa3.56□□□□□ -1.84
SMAD4-202ENST00000398417 MIAQ16674 131 aa3.56□□□□□ -1.84
SMAD4-202ENST00000398417 CELSR2Q9HCU4 2923 aa3.56□□□□□ -1.84
SMAD4-202ENST00000398417 TMEM256-PLSCR3K7ERE1 68 aa3.55□□□□□ -1.84
SMAD4-202ENST00000398417 ZNF843Q8N446 348 aa3.55□□□□□ -1.84
SMAD4-202ENST00000398417 PIK3CD-AS1Q5SR53 167 aa3.55□□□□□ -1.84
SMAD4-202ENST00000398417 RETNLBQ9BQ08 111 aa3.55□□□□□ -1.84
SMAD4-202ENST00000398417 COX7B2Q8TF08 81 aa3.55□□□□□ -1.84
SMAD4-202ENST00000398417 CDC42SE1Q9NRR8 79 aa3.55□□□□□ -1.84
SMAD4-202ENST00000398417 IGLV5-37A0A075B6J1 123 aa3.55□□□□□ -1.84
SMAD4-202ENST00000398417 C8orf87E5RJ46 101 aa3.55□□□□□ -1.84
SMAD4-202ENST00000398417 TRAV10A0A0B4J240 114 aa3.55□□□□□ -1.84
SMAD4-202ENST00000398417 LINC00482Q8N8I6 264 aa3.55□□□□□ -1.84
SMAD4-202ENST00000398417 PPDPFQ9H3Y8 114 aa3.55□□□□□ -1.84
SMAD4-202ENST00000398417 BAALC-AS2P0C853 105 aa3.54□□□□□ -1.84
SMAD4-202ENST00000398417 AMELXQ99217 191 aa3.54□□□□□ -1.84
SMAD4-202ENST00000398417 TRAV13-2A0A0B4J235 113 aa3.54□□□□□ -1.84
SMAD4-202ENST00000398417 LINC00242Q5T6M2 205 aa3.54□□□□□ -1.84
SMAD4-202ENST00000398417 Q6Q795 121 aa3.54□□□□□ -1.84
SMAD4-202ENST00000398417 LINC00308Q8TCZ7 52 aa3.54□□□□□ -1.84
SMAD4-202ENST00000398417 FAM30AQ9NZY2 134 aa3.54□□□□□ -1.84
SMAD4-202ENST00000398417 IGKV2-30P06310 120 aa3.54□□□□□ -1.84
SMAD4-202ENST00000398417 TNP2Q05952 138 aa3.54□□□□□ -1.84
SMAD4-202ENST00000398417 HRCT1Q6UXD1 115 aa3.54□□□□□ -1.84
SMAD4-202ENST00000398417 LINC01006Q8NI28 216 aa3.54□□□□□ -1.84
SMAD4-202ENST00000398417 FASNP49327 2511 aaKnown RBP3.54□□□□□ -1.84
SMAD4-202ENST00000398417 TRAV4A0A0B4J268 109 aa3.54□□□□□ -1.84
SMAD4-202ENST00000398417 ETDCA0A1B0GVM5 59 aa3.54□□□□□ -1.84
SMAD4-202ENST00000398417 MIR7-3HGQ8N6C7 128 aa3.54□□□□□ -1.84
SMAD4-202ENST00000398417 CRYGAP11844 174 aa3.54□□□□□ -1.84
SMAD4-202ENST00000398417 Q9BRP9 147 aa3.54□□□□□ -1.84
SMAD4-202ENST00000398417 UBE2D3P61077 147 aa3.53□□□□□ -1.84
SMAD4-202ENST00000398417 UBE2D2P62837 147 aa3.53□□□□□ -1.84
SMAD4-202ENST00000398417 ATP5G1P05496 136 aa3.53□□□□□ -1.84
SMAD4-202ENST00000398417 C11orf72Q8NBR9 251 aa3.53□□□□□ -1.84
SMAD4-202ENST00000398417 ANKRD11Q6UB99 2663 aaPredicted RBP3.53□□□□□ -1.84
SMAD4-202ENST00000398417 F8WDY8 70 aa3.53□□□□□ -1.84
SMAD4-202ENST00000398417 LRRK2Q5S007 2527 aa3.53□□□□□ -1.84
SMAD4-202ENST00000398417 JMJD1CQ15652 2540 aa3.53□□□□□ -1.84
SMAD4-202ENST00000398417 J3QKU1 62 aa3.53□□□□□ -1.84
SMAD4-202ENST00000398417 CD164Q04900 197 aa3.53□□□□□ -1.84
SMAD4-202ENST00000398417 SLPIP03973 132 aa3.52□□□□□ -1.85
SMAD4-202ENST00000398417 UPK3BQ9BT76 320 aa3.52□□□□□ -1.85
SMAD4-202ENST00000398417 SND1-IT1Q9HBX3 110 aa3.52□□□□□ -1.85
SMAD4-202ENST00000398417 IGLV4-60A0A075B6I1 120 aa3.52□□□□□ -1.85
SMAD4-202ENST00000398417 NDUFA1O15239 70 aa3.52□□□□□ -1.85
SMAD4-202ENST00000398417 IGHV4-30-4P0DP06 118 aa3.52□□□□□ -1.85
SMAD4-202ENST00000398417 PRYO14603 147 aa3.52□□□□□ -1.85
SMAD4-202ENST00000398417 NTM-AS1Q6ZSK4 140 aa3.52□□□□□ -1.85
SMAD4-202ENST00000398417 SMR3AQ99954 134 aa3.52□□□□□ -1.85
SMAD4-202ENST00000398417 A0A096LNT2 108 aa3.52□□□□□ -1.85
SMAD4-202ENST00000398417 LITAFQ99732 161 aa3.52□□□□□ -1.85
SMAD4-202ENST00000398417 IGKV3D-7A0A0C4DH55 119 aa3.52□□□□□ -1.85
SMAD4-202ENST00000398417 KIAA0087Q14695 138 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms