RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 C4orf26Q17RF5 130 aa12.89□□□□□ -0.35
CHRFAM7A-202ENST00000397827 LINC00643Q86TS7 51 aa12.89□□□□□ -0.35
CHRFAM7A-202ENST00000397827 IGLV4-60A0A075B6I1 120 aa12.89□□□□□ -0.35
CHRFAM7A-202ENST00000397827 ACYP1P07311 99 aa12.88□□□□□ -0.35
CHRFAM7A-202ENST00000397827 CRYGAP11844 174 aa12.88□□□□□ -0.35
CHRFAM7A-202ENST00000397827 CYSTM1Q9H1C7 97 aa12.88□□□□□ -0.35
CHRFAM7A-202ENST00000397827 TENM1Q9UKZ4 2725 aa12.88□□□□□ -0.35
CHRFAM7A-202ENST00000397827 TRBV6-8A0A0A6YYG3 113 aa12.87□□□□□ -0.35
CHRFAM7A-202ENST00000397827 LST1O00453 97 aa12.87□□□□□ -0.35
CHRFAM7A-202ENST00000397827 ATP5G1P05496 136 aa12.87□□□□□ -0.35
CHRFAM7A-202ENST00000397827 SOSTDC1Q6X4U4 206 aa12.87□□□□□ -0.35
CHRFAM7A-202ENST00000397827 C2orf48Q96LS8 159 aa12.87□□□□□ -0.35
CHRFAM7A-202ENST00000397827 HRCT1Q6UXD1 115 aa12.87□□□□□ -0.35
CHRFAM7A-202ENST00000397827 TRACP01848 142 aa12.86□□□□□ -0.35
CHRFAM7A-202ENST00000397827 DPH3Q96FX2 82 aa12.86□□□□□ -0.35
CHRFAM7A-202ENST00000397827 NSD1Q96L73 2696 aaPredicted RBP12.85□□□□□ -0.35
CHRFAM7A-202ENST00000397827 TOMM7Q9P0U1 55 aa12.84□□□□□ -0.35
CHRFAM7A-202ENST00000397827 OXTP01178 125 aa12.83□□□□□ -0.36
CHRFAM7A-202ENST00000397827 DSCR8Q96T75 97 aa12.83□□□□□ -0.36
CHRFAM7A-202ENST00000397827 INAFM1C9JVW0 142 aa12.82□□□□□ -0.36
CHRFAM7A-202ENST00000397827 X6R8D5 127 aa12.82□□□□□ -0.36
CHRFAM7A-202ENST00000397827 C5orf38Q86SI9 138 aa12.81□□□□□ -0.36
CHRFAM7A-202ENST00000397827 GYPEP15421 78 aa12.81□□□□□ -0.36
CHRFAM7A-202ENST00000397827 A0A096LPF7 62 aa12.81□□□□□ -0.36
CHRFAM7A-202ENST00000397827 COX7B2Q8TF08 81 aa12.8□□□□□ -0.36
CHRFAM7A-202ENST00000397827 ATRQ13535 2644 aa12.8□□□□□ -0.36
CHRFAM7A-202ENST00000397827 DEFB4AO15263 64 aa12.79□□□□□ -0.36
CHRFAM7A-202ENST00000397827 CXCL5P42830 114 aa12.79□□□□□ -0.36
CHRFAM7A-202ENST00000397827 TRRAPQ9Y4A5 3859 aa12.79□□□□□ -0.36
CHRFAM7A-202ENST00000397827 IGHV3OR16-9A0A0B4J2B5 98 aa12.79□□□□□ -0.36
CHRFAM7A-202ENST00000397827 ATOX1O00244 68 aa12.79□□□□□ -0.36
CHRFAM7A-202ENST00000397827 TMEM258P61165 79 aa12.78□□□□□ -0.36
CHRFAM7A-202ENST00000397827 LINC00612Q8N6U2 182 aa12.78□□□□□ -0.36
CHRFAM7A-202ENST00000397827 Q5XG85 94 aa12.77□□□□□ -0.36
CHRFAM7A-202ENST00000397827 FAM222AQ5U5X8 452 aa12.77□□□□□ -0.37
CHRFAM7A-202ENST00000397827 DEFB135Q30KP9 77 aa12.76□□□□□ -0.37
CHRFAM7A-202ENST00000397827 MIR7-3HGQ8N6C7 128 aa12.76□□□□□ -0.37
CHRFAM7A-202ENST00000397827 COPS9Q8WXC6 57 aa12.76□□□□□ -0.37
CHRFAM7A-202ENST00000397827 HIVEP1P15822 2718 aa12.75□□□□□ -0.37
CHRFAM7A-202ENST00000397827 CLPSL2Q6UWE3 100 aa12.75□□□□□ -0.37
CHRFAM7A-202ENST00000397827 MRAPQ8TCY5 172 aa12.75□□□□□ -0.37
CHRFAM7A-202ENST00000397827 LINC00959A0A1B0GUT2 108 aa12.74□□□□□ -0.37
CHRFAM7A-202ENST00000397827 HIST1H4AP62805 103 aaKnown RBP12.74□□□□□ -0.37
CHRFAM7A-202ENST00000397827 C9orf66Q5T8R8 295 aa12.74□□□□□ -0.37
CHRFAM7A-202ENST00000397827 SDIM1Q6ZPB5 146 aa12.74□□□□□ -0.37
CHRFAM7A-202ENST00000397827 PRO0255Q9UI72 69 aa12.74□□□□□ -0.37
CHRFAM7A-202ENST00000397827 A0A087WZ39 114 aa12.73□□□□□ -0.37
CHRFAM7A-202ENST00000397827 XCL1P47992 114 aa12.73□□□□□ -0.37
CHRFAM7A-202ENST00000397827 C11orf68Q9H3H3 251 aaKnown RBP12.73□□□□□ -0.37
CHRFAM7A-202ENST00000397827 TEP1Q99973 2627 aaKnown RBP12.72□□□□□ -0.37
CHRFAM7A-202ENST00000397827 LINC00158P58513 81 aa12.72□□□□□ -0.37
CHRFAM7A-202ENST00000397827 COX7A2LO14548 114 aa12.71□□□□□ -0.37
CHRFAM7A-202ENST00000397827 RPL18AQ02543 176 aaKnown RBP12.71□□□□□ -0.38
CHRFAM7A-202ENST00000397827 PAX4O43316 350 aa12.7□□□□□ -0.38
CHRFAM7A-202ENST00000397827 PFN2P35080 140 aa12.7□□□□□ -0.38
CHRFAM7A-202ENST00000397827 SND1-IT1Q9HBX3 110 aa12.69□□□□□ -0.38
CHRFAM7A-202ENST00000397827 LINC00337Q8N6G1 96 aa12.69□□□□□ -0.38
CHRFAM7A-202ENST00000397827 IGKV2-28A0A075B6P5 120 aa12.68□□□□□ -0.38
CHRFAM7A-202ENST00000397827 IGKV2D-28P01615 120 aa12.68□□□□□ -0.38
CHRFAM7A-202ENST00000397827 SERP2Q8N6R1 65 aa12.68□□□□□ -0.38
CHRFAM7A-202ENST00000397827 UPK3BQ9BT76 320 aa12.68□□□□□ -0.38
CHRFAM7A-202ENST00000397827 IGHV4-28A0A0C4DH34 117 aa12.68□□□□□ -0.38
CHRFAM7A-202ENST00000397827 BAALC-AS2P0C853 105 aa12.68□□□□□ -0.38
CHRFAM7A-202ENST00000397827 Q8N3U1 123 aa12.68□□□□□ -0.38
CHRFAM7A-202ENST00000397827 A0A1B0GUV1 79 aa12.67□□□□□ -0.38
CHRFAM7A-202ENST00000397827 LYRM9A8MSI8 78 aa12.67□□□□□ -0.38
CHRFAM7A-202ENST00000397827 C6orf226Q5I0X4 101 aa12.67□□□□□ -0.38
CHRFAM7A-202ENST00000397827 CCL18P55774 89 aa12.66□□□□□ -0.38
CHRFAM7A-202ENST00000397827 SS18Q15532 418 aa12.66□□□□□ -0.38
CHRFAM7A-202ENST00000397827 FAM218AQ96MZ4 157 aa12.66□□□□□ -0.38
CHRFAM7A-202ENST00000397827 IGKV3D-7A0A0C4DH55 119 aa12.66□□□□□ -0.38
CHRFAM7A-202ENST00000397827 CRPP02741 224 aa12.66□□□□□ -0.38
CHRFAM7A-202ENST00000397827 CELA1Q9UNI1 258 aa12.65□□□□□ -0.38
CHRFAM7A-202ENST00000397827 TRAV13-2A0A0B4J235 113 aa12.64□□□□□ -0.39
CHRFAM7A-202ENST00000397827 IBA57-AS1B1ANH7 110 aa12.64□□□□□ -0.39
CHRFAM7A-202ENST00000397827 LINC00269Q8N2A0 174 aa12.64□□□□□ -0.39
CHRFAM7A-202ENST00000397827 A0A087WVE0 104 aa12.64□□□□□ -0.39
CHRFAM7A-202ENST00000397827 APOC4P55056 127 aa12.64□□□□□ -0.39
CHRFAM7A-202ENST00000397827 DAD1P61803 113 aa12.64□□□□□ -0.39
CHRFAM7A-202ENST00000397827 IGLV10-54A0A075B6I4 117 aa12.63□□□□□ -0.39
CHRFAM7A-202ENST00000397827 C22orf24Q9Y442 160 aa12.62□□□□□ -0.39
CHRFAM7A-202ENST00000397827 C1orf43Q9BWL3 253 aa12.61□□□□□ -0.39
CHRFAM7A-202ENST00000397827 INAFM2P0DMQ5 153 aa12.61□□□□□ -0.39
CHRFAM7A-202ENST00000397827 HTN3P15516 51 aa12.61□□□□□ -0.39
CHRFAM7A-202ENST00000397827 RPL28P46779 137 aaKnown RBP12.6□□□□□ -0.39
CHRFAM7A-202ENST00000397827 Q8NAQ8 132 aa12.6□□□□□ -0.39
CHRFAM7A-202ENST00000397827 ANGP03950 147 aaKnown RBP12.6□□□□□ -0.39
CHRFAM7A-202ENST00000397827 MALP21145 153 aa12.6□□□□□ -0.39
CHRFAM7A-202ENST00000397827 SMIM11BQ8TCY0 68 aa12.6□□□□□ -0.39
CHRFAM7A-202ENST00000397827 Q9HAA7 133 aa12.6□□□□□ -0.39
CHRFAM7A-202ENST00000397827 PRO0628Q9UI54 55 aa12.59□□□□□ -0.39
CHRFAM7A-202ENST00000397827 USP17L23D6RBM5 183 aa12.59□□□□□ -0.39
CHRFAM7A-202ENST00000397827 LINC00336Q6ZUF6 198 aa12.59□□□□□ -0.39
CHRFAM7A-202ENST00000397827 Q8IZM0 81 aa12.58□□□□□ -0.4
CHRFAM7A-202ENST00000397827 IGHV4-30-4P0DP06 118 aa12.57□□□□□ -0.4
CHRFAM7A-202ENST00000397827 CHCHD10Q8WYQ3 142 aaPredicted RBP12.57□□□□□ -0.4
CHRFAM7A-202ENST00000397827 REG3AQ06141 175 aa12.57□□□□□ -0.4
CHRFAM7A-202ENST00000397827 LINC01561Q8N1V8 128 aa12.57□□□□□ -0.4
CHRFAM7A-202ENST00000397827 DNAL4O96015 105 aa12.56□□□□□ -0.4
CHRFAM7A-202ENST00000397827 MIFP14174 115 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms