RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 Q6ZRU5 148 aa15.33■□□□□ 0.04
TSPAN4-203ENST00000397397 LEPROTO15243 131 aa15.32■□□□□ 0.04
TSPAN4-203ENST00000397397 UNQ6190/PRO20217Q6UXQ8 127 aa15.32■□□□□ 0.04
TSPAN4-203ENST00000397397 CXCL5P42830 114 aa15.31■□□□□ 0.04
TSPAN4-203ENST00000397397 CDPF1Q6NVV7 123 aa15.31■□□□□ 0.04
TSPAN4-203ENST00000397397 PLEKHB2Q96CS7 222 aa15.31■□□□□ 0.04
TSPAN4-203ENST00000397397 JOSD1Q15040 202 aaPredicted RBP15.3■□□□□ 0.04
TSPAN4-203ENST00000397397 C10orf25Q5T742 122 aa15.3■□□□□ 0.04
TSPAN4-203ENST00000397397 E9PLD3 99 aa15.29■□□□□ 0.04
TSPAN4-203ENST00000397397 C9orf163Q8N9P6 203 aa15.28■□□□□ 0.04
TSPAN4-203ENST00000397397 DYNC1H1Q14204 4646 aaKnown RBP15.28■□□□□ 0.04
TSPAN4-203ENST00000397397 TSPEAR-AS2P59090 65 aa15.27■□□□□ 0.04
TSPAN4-203ENST00000397397 LINC01620Q4KN68 170 aa15.27■□□□□ 0.04
TSPAN4-203ENST00000397397 J3QQQ9 107 aa15.26■□□□□ 0.03
TSPAN4-203ENST00000397397 LGALS3P17931 250 aaKnown RBP15.26■□□□□ 0.03
TSPAN4-203ENST00000397397 MAJINQ3KP22 176 aa15.26■□□□□ 0.03
TSPAN4-203ENST00000397397 C6orf48Q9UBA6 75 aa15.26■□□□□ 0.03
TSPAN4-203ENST00000397397 DNAH5Q8TE73 4624 aa15.25■□□□□ 0.03
TSPAN4-203ENST00000397397 TRBV30A0A0K0K1B3 111 aa15.25■□□□□ 0.03
TSPAN4-203ENST00000397397 HSBP1L1C9JCN9 74 aa15.25■□□□□ 0.03
TSPAN4-203ENST00000397397 RNF151Q2KHN1 245 aa15.25■□□□□ 0.03
TSPAN4-203ENST00000397397 ANKRD39Q53RE8 183 aa15.25■□□□□ 0.03
TSPAN4-203ENST00000397397 PKHD1P08F94 4074 aa15.25■□□□□ 0.03
TSPAN4-203ENST00000397397 GCSHP23434 173 aa15.24■□□□□ 0.03
TSPAN4-203ENST00000397397 IGKV2D-26A0A0A0MRZ7 120 aa15.23■□□□□ 0.03
TSPAN4-203ENST00000397397 SFTA2Q6UW10 78 aa15.23■□□□□ 0.03
TSPAN4-203ENST00000397397 ZNF625Q96I27 306 aaPredicted RBP15.23■□□□□ 0.03
TSPAN4-203ENST00000397397 NDUFA12Q9UI09 145 aa15.23■□□□□ 0.03
TSPAN4-203ENST00000397397 C16orf90A8MZG2 172 aa15.22■□□□□ 0.03
TSPAN4-203ENST00000397397 PYY3Q5JQD4 70 aa15.22■□□□□ 0.03
TSPAN4-203ENST00000397397 C9orf116Q5BN46 136 aaPredicted RBP15.21■□□□□ 0.03
TSPAN4-203ENST00000397397 MYMXA0A1B0GTQ4 84 aa15.2■□□□□ 0.02
TSPAN4-203ENST00000397397 NMUP48645 174 aa15.2■□□□□ 0.02
TSPAN4-203ENST00000397397 LOC107984640A0A0U1RRK4 108 aa15.17■□□□□ 0.02
TSPAN4-203ENST00000397397 LOC105371267A0A1B0GV96 52 aa15.17■□□□□ 0.02
TSPAN4-203ENST00000397397 HERV-K104P63124 156 aa15.17■□□□□ 0.02
TSPAN4-203ENST00000397397 SDIM1Q6ZPB5 146 aa15.17■□□□□ 0.02
TSPAN4-203ENST00000397397 PKIGQ9Y2B9 76 aa15.17■□□□□ 0.02
TSPAN4-203ENST00000397397 KRTAP10-1P60331 282 aa15.17■□□□□ 0.02
TSPAN4-203ENST00000397397 RPL18AQ02543 176 aaKnown RBP15.16■□□□□ 0.02
TSPAN4-203ENST00000397397 VAMP8Q9BV40 100 aa15.16■□□□□ 0.02
TSPAN4-203ENST00000397397 TTTY13Q9BZ97 58 aa15.16■□□□□ 0.02
TSPAN4-203ENST00000397397 ERG28Q9UKR5 140 aa15.15■□□□□ 0.02
TSPAN4-203ENST00000397397 HERC2O95714 4834 aa15.15■□□□□ 0.02
TSPAN4-203ENST00000397397 ZNF815PA8K554 130 aa15.14■□□□□ 0.01
TSPAN4-203ENST00000397397 TLX1NBP0CAT3 122 aa15.14■□□□□ 0.01
TSPAN4-203ENST00000397397 PFN2P35080 140 aa15.14■□□□□ 0.01
TSPAN4-203ENST00000397397 PAM16Q9Y3D7 125 aa15.14■□□□□ 0.01
TSPAN4-203ENST00000397397 NDUFC2-KCTD14E9PQ53 114 aa15.13■□□□□ 0.01
TSPAN4-203ENST00000397397 GAGE2BQ13066 116 aa15.13■□□□□ 0.01
TSPAN4-203ENST00000397397 MEIG1Q5JSS6 88 aa15.13■□□□□ 0.01
TSPAN4-203ENST00000397397 PCP2Q8IVA1 136 aa15.12■□□□□ 0.01
TSPAN4-203ENST00000397397 A0A096LNI7 61 aa15.11■□□□□ 0.01
TSPAN4-203ENST00000397397 SPATA45Q537H7 98 aa15.11■□□□□ 0.01
TSPAN4-203ENST00000397397 Q6ZRP5 223 aa15.11■□□□□ 0.01
TSPAN4-203ENST00000397397 KIAA1109Q2LD37 5005 aa15.11■□□□□ 0.01
TSPAN4-203ENST00000397397 IGKV2-24A0A0C4DH68 120 aa15.1■□□□□ 0.01
TSPAN4-203ENST00000397397 GAGE2EQ4V326 116 aa15.1■□□□□ 0.01
TSPAN4-203ENST00000397397 GAGE2DQ9UEU5 116 aa15.1■□□□□ 0.01
TSPAN4-203ENST00000397397 A0A0U1RRA0 63 aa15.09■□□□□ 0.01
TSPAN4-203ENST00000397397 CHTF8P0CG12 524 aa15.09■□□□□ 0.01
TSPAN4-203ENST00000397397 PTTG1IPP53801 180 aa15.09■□□□□ 0.01
TSPAN4-203ENST00000397397 LINC00158P58513 81 aa15.09■□□□□ 0.01
TSPAN4-203ENST00000397397 COX17Q14061 63 aa15.09■□□□□ 0.01
TSPAN4-203ENST00000397397 DNAH8Q96JB1 4490 aa15.09■□□□□ 0.01
TSPAN4-203ENST00000397397 A0A0J9YXY3 114 aa15.09■□□□□ 0.01
TSPAN4-203ENST00000397397 LINC00587B1AMM8 73 aa15.09■□□□□ 0.01
TSPAN4-203ENST00000397397 SMIM13P0DJ93 91 aa15.09■□□□□ 0.01
TSPAN4-203ENST00000397397 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.07■□□□□ 0
TSPAN4-203ENST00000397397 PANO1I0J062 215 aa15.06■□□□□ 0
TSPAN4-203ENST00000397397 LRP1BQ9NZR2 4599 aa15.06■□□□□ 0
TSPAN4-203ENST00000397397 FAM30AQ9NZY2 134 aa15.06■□□□□ 0
TSPAN4-203ENST00000397397 LINC00474Q9P2X8 69 aa15.05■□□□□ -0
TSPAN4-203ENST00000397397 CIRBPQ14011 172 aaKnown RBP15.04■□□□□ -0
TSPAN4-203ENST00000397397 SCGB1D4Q6XE38 83 aa15.04■□□□□ -0
TSPAN4-203ENST00000397397 DPH3Q96FX2 82 aa15.04■□□□□ -0
TSPAN4-203ENST00000397397 SMIM6P0DI80 62 aa15.03■□□□□ -0
TSPAN4-203ENST00000397397 COX8AP10176 69 aa15.03■□□□□ -0
TSPAN4-203ENST00000397397 S100A12P80511 92 aa15.03■□□□□ -0
TSPAN4-203ENST00000397397 Q6ZSA8 131 aa15.03■□□□□ -0
TSPAN4-203ENST00000397397 SPACA4Q8TDM5 124 aa15.03■□□□□ -0
TSPAN4-203ENST00000397397 C14orf144Q96I85 54 aa15.02■□□□□ -0
TSPAN4-203ENST00000397397 XAGE1AQ9HD64 81 aa15.02■□□□□ -0
TSPAN4-203ENST00000397397 MIR7-3HGQ8N6C7 128 aa15.01□□□□□ -0.01
TSPAN4-203ENST00000397397 C9orf129Q5T035 196 aaKnown RBP15□□□□□ -0.01
TSPAN4-203ENST00000397397 BOD1L2Q8IYS8 172 aa15□□□□□ -0.01
TSPAN4-203ENST00000397397 TIMM17BO60830 172 aa15□□□□□ -0.01
TSPAN4-203ENST00000397397 DAND5Q8N907 189 aa15□□□□□ -0.01
TSPAN4-203ENST00000397397 SND1-IT1Q9HBX3 110 aa15□□□□□ -0.01
TSPAN4-203ENST00000397397 RYR1P21817 5038 aa14.99□□□□□ -0.01
TSPAN4-203ENST00000397397 TP73-AS1Q9UF72 201 aa14.99□□□□□ -0.01
TSPAN4-203ENST00000397397 ADAMTSL4-AS1Q5T5F5 129 aa14.98□□□□□ -0.01
TSPAN4-203ENST00000397397 DLEU1O43261 78 aa14.97□□□□□ -0.01
TSPAN4-203ENST00000397397 LITAFQ99732 161 aa14.97□□□□□ -0.01
TSPAN4-203ENST00000397397 A0A087WYN8 130 aa14.96□□□□□ -0.01
TSPAN4-203ENST00000397397 HAMPP81172 84 aa14.96□□□□□ -0.01
TSPAN4-203ENST00000397397 SLC25A34Q6PIV7 304 aa14.96□□□□□ -0.01
TSPAN4-203ENST00000397397 TMEM238C9JI98 176 aa14.95□□□□□ -0.02
TSPAN4-203ENST00000397397 A0A1W2PNN7 141 aa14.94□□□□□ -0.02
TSPAN4-203ENST00000397397 FAM168BA1KXE4 195 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms