RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 CLPSL2Q6UWE3 100 aa16.56■□□□□ 0.24
PABPN1-202ENST00000397276 COX7B2Q8TF08 81 aa16.55■□□□□ 0.24
PABPN1-202ENST00000397276 LINC00612Q8N6U2 182 aa16.55■□□□□ 0.24
PABPN1-202ENST00000397276 C22orf24Q9Y442 160 aa16.54■□□□□ 0.24
PABPN1-202ENST00000397276 PRO0255Q9UI72 69 aa16.53■□□□□ 0.24
PABPN1-202ENST00000397276 IGHV3OR16-9A0A0B4J2B5 98 aa16.52■□□□□ 0.24
PABPN1-202ENST00000397276 BAALC-AS2P0C853 105 aa16.52■□□□□ 0.23
PABPN1-202ENST00000397276 C11orf68Q9H3H3 251 aaKnown RBP16.52■□□□□ 0.23
PABPN1-202ENST00000397276 Q9HAA7 133 aa16.52■□□□□ 0.23
PABPN1-202ENST00000397276 SMIM9A6NGZ8 99 aa16.5■□□□□ 0.23
PABPN1-202ENST00000397276 PAX4O43316 350 aa16.5■□□□□ 0.23
PABPN1-202ENST00000397276 XCL1P47992 114 aa16.5■□□□□ 0.23
PABPN1-202ENST00000397276 LINC00959A0A1B0GUT2 108 aa16.5■□□□□ 0.23
PABPN1-202ENST00000397276 TEP1Q99973 2627 aaKnown RBP16.5■□□□□ 0.23
PABPN1-202ENST00000397276 MIR7-3HGQ8N6C7 128 aa16.49■□□□□ 0.23
PABPN1-202ENST00000397276 IGHV4-28A0A0C4DH34 117 aa16.48■□□□□ 0.23
PABPN1-202ENST00000397276 LINC00158P58513 81 aa16.47■□□□□ 0.23
PABPN1-202ENST00000397276 PFN2P35080 140 aa16.46■□□□□ 0.23
PABPN1-202ENST00000397276 COPS9Q8WXC6 57 aa16.46■□□□□ 0.23
PABPN1-202ENST00000397276 A0A087WZ39 114 aa16.45■□□□□ 0.22
PABPN1-202ENST00000397276 Q8N3U1 123 aa16.45■□□□□ 0.22
PABPN1-202ENST00000397276 CELA1Q9UNI1 258 aa16.45■□□□□ 0.22
PABPN1-202ENST00000397276 APOC4P55056 127 aa16.44■□□□□ 0.22
PABPN1-202ENST00000397276 LYRM9A8MSI8 78 aa16.44■□□□□ 0.22
PABPN1-202ENST00000397276 ACYP1P07311 99 aa16.44■□□□□ 0.22
PABPN1-202ENST00000397276 HTN3P15516 51 aa16.44■□□□□ 0.22
PABPN1-202ENST00000397276 DAD1P61803 113 aa16.44■□□□□ 0.22
PABPN1-202ENST00000397276 C9orf129Q5T035 196 aaKnown RBP16.43■□□□□ 0.22
PABPN1-202ENST00000397276 GAGE2AQ6NT46 116 aa16.43■□□□□ 0.22
PABPN1-202ENST00000397276 LINC00643Q86TS7 51 aa16.43■□□□□ 0.22
PABPN1-202ENST00000397276 C6orf226Q5I0X4 101 aa16.42■□□□□ 0.22
PABPN1-202ENST00000397276 TRACP01848 142 aa16.41■□□□□ 0.22
PABPN1-202ENST00000397276 SS18Q15532 418 aa16.41■□□□□ 0.22
PABPN1-202ENST00000397276 LINC00269Q8N2A0 174 aa16.4■□□□□ 0.22
PABPN1-202ENST00000397276 IGLV10-54A0A075B6I4 117 aa16.4■□□□□ 0.22
PABPN1-202ENST00000397276 LINC00337Q8N6G1 96 aa16.4■□□□□ 0.22
PABPN1-202ENST00000397276 IMUPQ9GZP8 106 aa16.39■□□□□ 0.21
PABPN1-202ENST00000397276 SND1-IT1Q9HBX3 110 aa16.39■□□□□ 0.21
PABPN1-202ENST00000397276 KLK5Q9Y337 293 aaPredicted RBP16.39■□□□□ 0.21
PABPN1-202ENST00000397276 A0A1B0GUV1 79 aa16.39■□□□□ 0.21
PABPN1-202ENST00000397276 C9orf153Q5TBE3 101 aa16.38■□□□□ 0.21
PABPN1-202ENST00000397276 PPDPFQ9H3Y8 114 aa16.38■□□□□ 0.21
PABPN1-202ENST00000397276 IGHV4-30-4P0DP06 118 aa16.37■□□□□ 0.21
PABPN1-202ENST00000397276 Q8NAQ8 132 aa16.37■□□□□ 0.21
PABPN1-202ENST00000397276 SDIM1Q6ZPB5 146 aa16.37■□□□□ 0.21
PABPN1-202ENST00000397276 IGKV2-28A0A075B6P5 120 aa16.36■□□□□ 0.21
PABPN1-202ENST00000397276 IGKV2D-28P01615 120 aa16.36■□□□□ 0.21
PABPN1-202ENST00000397276 A0A087WYN8 130 aa16.36■□□□□ 0.21
PABPN1-202ENST00000397276 ANGP03950 147 aaKnown RBP16.36■□□□□ 0.21
PABPN1-202ENST00000397276 CCL18P55774 89 aa16.36■□□□□ 0.21
PABPN1-202ENST00000397276 MALP21145 153 aa16.35■□□□□ 0.21
PABPN1-202ENST00000397276 C3orf22Q8N5N4 141 aa16.35■□□□□ 0.21
PABPN1-202ENST00000397276 CRPP02741 224 aa16.34■□□□□ 0.21
PABPN1-202ENST00000397276 ATP5G1P05496 136 aa16.34■□□□□ 0.21
PABPN1-202ENST00000397276 TMEM126AQ9H061 195 aa16.34■□□□□ 0.21
PABPN1-202ENST00000397276 IBA57-AS1B1ANH7 110 aa16.33■□□□□ 0.2
PABPN1-202ENST00000397276 C14orf132Q9NPU4 83 aa16.32■□□□□ 0.2
PABPN1-202ENST00000397276 MIFP14174 115 aa16.32■□□□□ 0.2
PABPN1-202ENST00000397276 TRAV13-2A0A0B4J235 113 aa16.31■□□□□ 0.2
PABPN1-202ENST00000397276 SMIM11BQ8TCY0 68 aa16.31■□□□□ 0.2
PABPN1-202ENST00000397276 SPART-AS1P0CW21 52 aa16.31■□□□□ 0.2
PABPN1-202ENST00000397276 RPL28P46779 137 aaKnown RBP16.31■□□□□ 0.2
PABPN1-202ENST00000397276 OXLD1Q5BKU9 147 aa16.31■□□□□ 0.2
PABPN1-202ENST00000397276 WFDC9Q8NEX5 89 aa16.3■□□□□ 0.2
PABPN1-202ENST00000397276 LOC107984640A0A0U1RRK4 108 aa16.29■□□□□ 0.2
PABPN1-202ENST00000397276 REG3AQ06141 175 aa16.29■□□□□ 0.2
PABPN1-202ENST00000397276 CHCHD10Q8WYQ3 142 aaPredicted RBP16.29■□□□□ 0.2
PABPN1-202ENST00000397276 UQCRQO14949 82 aa16.28■□□□□ 0.2
PABPN1-202ENST00000397276 IGKV3D-7A0A0C4DH55 119 aa16.27■□□□□ 0.2
PABPN1-202ENST00000397276 F8P00451 2351 aa16.27■□□□□ 0.2
PABPN1-202ENST00000397276 INAFM2P0DMQ5 153 aa16.27■□□□□ 0.2
PABPN1-202ENST00000397276 OR13C6PQ8NH95 151 aa16.27■□□□□ 0.2
PABPN1-202ENST00000397276 SLPIP03973 132 aa16.26■□□□□ 0.19
PABPN1-202ENST00000397276 Q8IZM0 81 aa16.26■□□□□ 0.19
PABPN1-202ENST00000397276 LINC00526Q96FQ7 95 aa16.26■□□□□ 0.19
PABPN1-202ENST00000397276 CYSTM1Q9H1C7 97 aa16.26■□□□□ 0.19
PABPN1-202ENST00000397276 C2orf48Q96LS8 159 aa16.25■□□□□ 0.19
PABPN1-202ENST00000397276 FLNBO75369 2602 aaKnown RBP16.25■□□□□ 0.19
PABPN1-202ENST00000397276 CD164L2Q6UWJ8 174 aa16.25■□□□□ 0.19
PABPN1-202ENST00000397276 DNAL4O96015 105 aa16.24■□□□□ 0.19
PABPN1-202ENST00000397276 RETNQ9HD89 108 aa16.24■□□□□ 0.19
PABPN1-202ENST00000397276 A0A087WVE0 104 aa16.23■□□□□ 0.19
PABPN1-202ENST00000397276 CXCL5P42830 114 aa16.23■□□□□ 0.19
PABPN1-202ENST00000397276 C9orf116Q5BN46 136 aaPredicted RBP16.23■□□□□ 0.19
PABPN1-202ENST00000397276 LINC00846Q9NV44 126 aa16.23■□□□□ 0.19
PABPN1-202ENST00000397276 NCR3O14931 201 aa16.22■□□□□ 0.19
PABPN1-202ENST00000397276 LECT2O14960 151 aa16.22■□□□□ 0.19
PABPN1-202ENST00000397276 PRR3P79522 188 aaKnown RBP16.22■□□□□ 0.19
PABPN1-202ENST00000397276 COX7CP15954 63 aa16.21■□□□□ 0.19
PABPN1-202ENST00000397276 CFAP161Q6P656 301 aa16.21■□□□□ 0.19
PABPN1-202ENST00000397276 KIAA0087Q14695 138 aa16.2■□□□□ 0.18
PABPN1-202ENST00000397276 ANK2Q01484 3957 aa16.2■□□□□ 0.18
PABPN1-202ENST00000397276 hADV29S1A0JD25 119 aa16.2■□□□□ 0.18
PABPN1-202ENST00000397276 KLK12Q9UKR0 248 aa16.2■□□□□ 0.18
PABPN1-202ENST00000397276 KRTAP10-11P60412 298 aa16.18■□□□□ 0.18
PABPN1-202ENST00000397276 HIST1H4AP62805 103 aaKnown RBP16.18■□□□□ 0.18
PABPN1-202ENST00000397276 LELP1Q5T871 98 aa16.17■□□□□ 0.18
PABPN1-202ENST00000397276 WIPF1O43516 503 aa16.16■□□□□ 0.18
PABPN1-202ENST00000397276 C6orf223Q8N319 242 aa16.16■□□□□ 0.18
PABPN1-202ENST00000397276 FBN1P35555 2871 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms