RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 HERC2O95714 4834 aa18.79■□□□□ 0.6
CHCHD4-202ENST00000396914 DNAH8Q96JB1 4490 aa18.78■□□□□ 0.6
CHCHD4-202ENST00000396914 LOC107984640A0A0U1RRK4 108 aa18.78■□□□□ 0.6
CHCHD4-202ENST00000396914 ZNF22P17026 224 aaPredicted RBP18.78■□□□□ 0.6
CHCHD4-202ENST00000396914 TMEM170BQ5T4T1 132 aa18.78■□□□□ 0.6
CHCHD4-202ENST00000396914 C11orf86A6NJI1 115 aa18.77■□□□□ 0.6
CHCHD4-202ENST00000396914 MAJINQ3KP22 176 aa18.77■□□□□ 0.6
CHCHD4-202ENST00000396914 A0A096LNI7 61 aa18.76■□□□□ 0.59
CHCHD4-202ENST00000396914 RPL18AQ02543 176 aaKnown RBP18.76■□□□□ 0.59
CHCHD4-202ENST00000396914 GAGE2BQ13066 116 aa18.76■□□□□ 0.59
CHCHD4-202ENST00000396914 RNF151Q2KHN1 245 aa18.76■□□□□ 0.59
CHCHD4-202ENST00000396914 Q8N1X5 172 aa18.75■□□□□ 0.59
CHCHD4-202ENST00000396914 COX7B2Q8TF08 81 aa18.75■□□□□ 0.59
CHCHD4-202ENST00000396914 SPACA4Q8TDM5 124 aa18.74■□□□□ 0.59
CHCHD4-202ENST00000396914 C6orf48Q9UBA6 75 aa18.74■□□□□ 0.59
CHCHD4-202ENST00000396914 F8VRH5 84 aa18.74■□□□□ 0.59
CHCHD4-202ENST00000396914 LINC00474Q9P2X8 69 aa18.73■□□□□ 0.59
CHCHD4-202ENST00000396914 CIRBPQ14011 172 aaKnown RBP18.72■□□□□ 0.59
CHCHD4-202ENST00000396914 TRBV30A0A0K0K1B3 111 aa18.71■□□□□ 0.59
CHCHD4-202ENST00000396914 MAP1LC3CQ9BXW4 147 aa18.71■□□□□ 0.59
CHCHD4-202ENST00000396914 PTTG1IPP53801 180 aa18.7■□□□□ 0.58
CHCHD4-202ENST00000396914 KRTAP17-1Q9BYP8 105 aa18.7■□□□□ 0.58
CHCHD4-202ENST00000396914 A0A087WYN8 130 aa18.69■□□□□ 0.58
CHCHD4-202ENST00000396914 FAM229AH3BQW9 127 aa18.69■□□□□ 0.58
CHCHD4-202ENST00000396914 CXCL5P42830 114 aa18.69■□□□□ 0.58
CHCHD4-202ENST00000396914 EPM2AB3EWF7 344 aa18.68■□□□□ 0.58
CHCHD4-202ENST00000396914 ODF1Q14990 250 aa18.68■□□□□ 0.58
CHCHD4-202ENST00000396914 STPG4Q8N801 248 aa18.68■□□□□ 0.58
CHCHD4-202ENST00000396914 C9orf116Q5BN46 136 aaPredicted RBP18.67■□□□□ 0.58
CHCHD4-202ENST00000396914 Q5VSD8 79 aa18.66■□□□□ 0.58
CHCHD4-202ENST00000396914 LINC00528Q8N1L1 170 aa18.66■□□□□ 0.58
CHCHD4-202ENST00000396914 COA6Q5JTJ3 125 aaKnown RBP18.66■□□□□ 0.58
CHCHD4-202ENST00000396914 IGLV5-39A0A0G2JS06 123 aa18.64■□□□□ 0.57
CHCHD4-202ENST00000396914 GAGE2EQ4V326 116 aa18.64■□□□□ 0.57
CHCHD4-202ENST00000396914 GAGE2DQ9UEU5 116 aa18.64■□□□□ 0.57
CHCHD4-202ENST00000396914 PMCHL2Q9BQD1 86 aa18.63■□□□□ 0.57
CHCHD4-202ENST00000396914 TLX1NBP0CAT3 122 aa18.62■□□□□ 0.57
CHCHD4-202ENST00000396914 PLNP26678 52 aa18.62■□□□□ 0.57
CHCHD4-202ENST00000396914 Q6ZRP5 223 aa18.62■□□□□ 0.57
CHCHD4-202ENST00000396914 PLAC8Q9NZF1 115 aa18.62■□□□□ 0.57
CHCHD4-202ENST00000396914 TMEM223A0PJW6 202 aa18.61■□□□□ 0.57
CHCHD4-202ENST00000396914 NDUFC2-KCTD14E9PQ53 114 aa18.6■□□□□ 0.57
CHCHD4-202ENST00000396914 KRTAP4-5Q9BYR2 181 aa18.6■□□□□ 0.57
CHCHD4-202ENST00000396914 DPM2O94777 84 aa18.59■□□□□ 0.57
CHCHD4-202ENST00000396914 SYS1-DBNDD2H3BUS1 97 aa18.57■□□□□ 0.56
CHCHD4-202ENST00000396914 IGKCP01834 107 aa18.57■□□□□ 0.56
CHCHD4-202ENST00000396914 PLA2G1BP04054 148 aaKnown RBP18.56■□□□□ 0.56
CHCHD4-202ENST00000396914 S100A6P06703 90 aa18.53■□□□□ 0.56
CHCHD4-202ENST00000396914 KRTDAPP60985 99 aa18.53■□□□□ 0.56
CHCHD4-202ENST00000396914 FAT1Q14517 4588 aa18.52■□□□□ 0.56
CHCHD4-202ENST00000396914 A0A1W2PNN7 141 aa18.52■□□□□ 0.56
CHCHD4-202ENST00000396914 C7orf33Q8WU49 177 aa18.52■□□□□ 0.56
CHCHD4-202ENST00000396914 HERVK_113P61574 105 aa18.51■□□□□ 0.55
CHCHD4-202ENST00000396914 ZNF625Q96I27 306 aaPredicted RBP18.51■□□□□ 0.55
CHCHD4-202ENST00000396914 PET117Q6UWS5 81 aa18.5■□□□□ 0.55
CHCHD4-202ENST00000396914 C3orf79P0CE67 100 aa18.49■□□□□ 0.55
CHCHD4-202ENST00000396914 RPL37AP61513 92 aaKnown RBP18.49■□□□□ 0.55
CHCHD4-202ENST00000396914 PFN2P35080 140 aa18.49■□□□□ 0.55
CHCHD4-202ENST00000396914 SFTA2Q6UW10 78 aa18.49■□□□□ 0.55
CHCHD4-202ENST00000396914 XAGE1AQ9HD64 81 aa18.49■□□□□ 0.55
CHCHD4-202ENST00000396914 FAM168BA1KXE4 195 aa18.48■□□□□ 0.55
CHCHD4-202ENST00000396914 S100A2P29034 98 aa18.48■□□□□ 0.55
CHCHD4-202ENST00000396914 FAM19A5Q7Z5A7 132 aaPredicted RBP18.48■□□□□ 0.55
CHCHD4-202ENST00000396914 C9orf129Q5T035 196 aaKnown RBP18.46■□□□□ 0.55
CHCHD4-202ENST00000396914 LINC01545Q5VT33 79 aa18.45■□□□□ 0.54
CHCHD4-202ENST00000396914 ERG28Q9UKR5 140 aa18.45■□□□□ 0.54
CHCHD4-202ENST00000396914 HIST3H2BBQ8N257 126 aa18.44■□□□□ 0.54
CHCHD4-202ENST00000396914 LEPROTO15243 131 aa18.43■□□□□ 0.54
CHCHD4-202ENST00000396914 PLEKHB2Q96CS7 222 aa18.43■□□□□ 0.54
CHCHD4-202ENST00000396914 C20orf202A1L168 122 aa18.41■□□□□ 0.54
CHCHD4-202ENST00000396914 NDUFA12Q9UI09 145 aa18.41■□□□□ 0.54
CHCHD4-202ENST00000396914 INAFM2P0DMQ5 153 aa18.4■□□□□ 0.54
CHCHD4-202ENST00000396914 PHF5AQ7RTV0 110 aaKnown RBP18.4■□□□□ 0.54
CHCHD4-202ENST00000396914 LGALS3P17931 250 aaKnown RBP18.39■□□□□ 0.53
CHCHD4-202ENST00000396914 COX17Q14061 63 aa18.39■□□□□ 0.53
CHCHD4-202ENST00000396914 SRRM2Q9UQ35 2752 aaKnown RBP18.38■□□□□ 0.53
CHCHD4-202ENST00000396914 MYMXA0A1B0GTQ4 84 aa18.38■□□□□ 0.53
CHCHD4-202ENST00000396914 J3QQQ9 107 aa18.38■□□□□ 0.53
CHCHD4-202ENST00000396914 LINC00158P58513 81 aa18.38■□□□□ 0.53
CHCHD4-202ENST00000396914 TSPEAR-AS2P59090 65 aa18.38■□□□□ 0.53
CHCHD4-202ENST00000396914 SNRPEP62304 92 aaKnown RBP18.38■□□□□ 0.53
CHCHD4-202ENST00000396914 MEIG1Q5JSS6 88 aa18.38■□□□□ 0.53
CHCHD4-202ENST00000396914 A0A0U1RRA0 63 aa18.37■□□□□ 0.53
CHCHD4-202ENST00000396914 HIST1H2BLQ99880 126 aa18.37■□□□□ 0.53
CHCHD4-202ENST00000396914 M0QXV9 152 aa18.36■□□□□ 0.53
CHCHD4-202ENST00000396914 HERV-K104P63124 156 aa18.36■□□□□ 0.53
CHCHD4-202ENST00000396914 ABCA13Q86UQ4 5058 aa18.34■□□□□ 0.53
CHCHD4-202ENST00000396914 SERTAD4-AS1Q5TG53 156 aa18.34■□□□□ 0.53
CHCHD4-202ENST00000396914 KRTAP7-1Q8IUC3 87 aa18.32■□□□□ 0.52
CHCHD4-202ENST00000396914 E9PLD3 99 aa18.32■□□□□ 0.52
CHCHD4-202ENST00000396914 KRTAP10-4P60372 401 aaPredicted RBP18.32■□□□□ 0.52
CHCHD4-202ENST00000396914 SND1-IT1Q9HBX3 110 aa18.32■□□□□ 0.52
CHCHD4-202ENST00000396914 VPS13BQ7Z7G8 4022 aa18.31■□□□□ 0.52
CHCHD4-202ENST00000396914 SMIM13P0DJ93 91 aa18.31■□□□□ 0.52
CHCHD4-202ENST00000396914 NMUP48645 174 aa18.3■□□□□ 0.52
CHCHD4-202ENST00000396914 UBE2BP63146 152 aa18.3■□□□□ 0.52
CHCHD4-202ENST00000396914 LINC00587B1AMM8 73 aa18.29■□□□□ 0.52
CHCHD4-202ENST00000396914 ATOH7Q8N100 152 aa18.29■□□□□ 0.52
CHCHD4-202ENST00000396914 PRR3P79522 188 aaKnown RBP18.28■□□□□ 0.52
CHCHD4-202ENST00000396914 C22orf24Q9Y442 160 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms