RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 LINC00337Q8N6G1 96 aa7.42□□□□□ -1.22
ACTN1-203ENST00000394419 FAM218AQ96MZ4 157 aa7.42□□□□□ -1.22
ACTN1-203ENST00000394419 SMIM11BQ8TCY0 68 aa7.42□□□□□ -1.22
ACTN1-203ENST00000394419 LINC00959A0A1B0GUT2 108 aa7.41□□□□□ -1.22
ACTN1-203ENST00000394419 DAD1P61803 113 aa7.41□□□□□ -1.22
ACTN1-203ENST00000394419 C14orf132Q9NPU4 83 aa7.41□□□□□ -1.22
ACTN1-203ENST00000394419 FAM236AA0A1B0GUQ0 79 aa7.41□□□□□ -1.22
ACTN1-203ENST00000394419 FAM236BA0A1B0GV22 79 aa7.41□□□□□ -1.22
ACTN1-203ENST00000394419 PRO0255Q9UI72 69 aa7.4□□□□□ -1.23
ACTN1-203ENST00000394419 PLAC8L1A1L4L8 177 aa7.39□□□□□ -1.23
ACTN1-203ENST00000394419 A0A087WYN8 130 aa7.39□□□□□ -1.23
ACTN1-203ENST00000394419 J3QKU1 62 aa7.39□□□□□ -1.23
ACTN1-203ENST00000394419 C9orf116Q5BN46 136 aaPredicted RBP7.39□□□□□ -1.23
ACTN1-203ENST00000394419 S100A7L2Q5SY68 101 aa7.39□□□□□ -1.23
ACTN1-203ENST00000394419 IGKV3D-7A0A0C4DH55 119 aa7.39□□□□□ -1.23
ACTN1-203ENST00000394419 Q8N3U1 123 aa7.39□□□□□ -1.23
ACTN1-203ENST00000394419 IGHV3OR16-9A0A0B4J2B5 98 aa7.38□□□□□ -1.23
ACTN1-203ENST00000394419 INAFM2P0DMQ5 153 aa7.38□□□□□ -1.23
ACTN1-203ENST00000394419 NCR3O14931 201 aa7.38□□□□□ -1.23
ACTN1-203ENST00000394419 IL17DQ8TAD2 202 aa7.37□□□□□ -1.23
ACTN1-203ENST00000394419 TRACP01848 142 aa7.37□□□□□ -1.23
ACTN1-203ENST00000394419 HILS1P60008 231 aa7.37□□□□□ -1.23
ACTN1-203ENST00000394419 C19orf73Q9NVV2 129 aa7.37□□□□□ -1.23
ACTN1-203ENST00000394419 A0A087WZ39 114 aa7.36□□□□□ -1.23
ACTN1-203ENST00000394419 IBA57-AS1B1ANH7 110 aa7.36□□□□□ -1.23
ACTN1-203ENST00000394419 OVOL2Q9BRP0 275 aa7.36□□□□□ -1.23
ACTN1-203ENST00000394419 IGKV2-28A0A075B6P5 120 aa7.36□□□□□ -1.23
ACTN1-203ENST00000394419 INAFM1C9JVW0 142 aa7.36□□□□□ -1.23
ACTN1-203ENST00000394419 IGKV2D-28P01615 120 aa7.36□□□□□ -1.23
ACTN1-203ENST00000394419 CSNK1G2-AS1Q8NCQ2 148 aa7.36□□□□□ -1.23
ACTN1-203ENST00000394419 F8P00451 2351 aa7.36□□□□□ -1.23
ACTN1-203ENST00000394419 HIST1H4AP62805 103 aaKnown RBP7.36□□□□□ -1.23
ACTN1-203ENST00000394419 CHCHD10Q8WYQ3 142 aaPredicted RBP7.35□□□□□ -1.23
ACTN1-203ENST00000394419 KLK12Q9UKR0 248 aa7.35□□□□□ -1.23
ACTN1-203ENST00000394419 NOTCH1P46531 2555 aa7.35□□□□□ -1.23
ACTN1-203ENST00000394419 MAST4O15021 2626 aa7.35□□□□□ -1.23
ACTN1-203ENST00000394419 H0YGX0 51 aa7.35□□□□□ -1.23
ACTN1-203ENST00000394419 C5orf47Q569G3 176 aa7.35□□□□□ -1.23
ACTN1-203ENST00000394419 SDIM1Q6ZPB5 146 aa7.35□□□□□ -1.23
ACTN1-203ENST00000394419 RPL28P46779 137 aaKnown RBP7.34□□□□□ -1.23
ACTN1-203ENST00000394419 REG3AQ06141 175 aa7.34□□□□□ -1.23
ACTN1-203ENST00000394419 KLK5Q9Y337 293 aaPredicted RBP7.34□□□□□ -1.23
ACTN1-203ENST00000394419 HIVEP1P15822 2718 aa7.34□□□□□ -1.23
ACTN1-203ENST00000394419 TENM1Q9UKZ4 2725 aa7.34□□□□□ -1.23
ACTN1-203ENST00000394419 ACYP1P07311 99 aa7.34□□□□□ -1.23
ACTN1-203ENST00000394419 LY6G6DO95868 133 aa7.33□□□□□ -1.24
ACTN1-203ENST00000394419 SPATA3Q8NHX4 192 aa7.33□□□□□ -1.24
ACTN1-203ENST00000394419 ORMDL1Q9P0S3 153 aa7.33□□□□□ -1.24
ACTN1-203ENST00000394419 IGHV4-28A0A0C4DH34 117 aa7.33□□□□□ -1.24
ACTN1-203ENST00000394419 LINC00643Q86TS7 51 aa7.33□□□□□ -1.24
ACTN1-203ENST00000394419 C16orf95Q9H693 158 aa7.33□□□□□ -1.24
ACTN1-203ENST00000394419 LAMTOR3Q9UHA4 124 aa7.32□□□□□ -1.24
ACTN1-203ENST00000394419 AKAP9Q99996 3911 aa7.32□□□□□ -1.24
ACTN1-203ENST00000394419 KRTAP1-1Q07627 177 aa7.32□□□□□ -1.24
ACTN1-203ENST00000394419 C9orf66Q5T8R8 295 aa7.32□□□□□ -1.24
ACTN1-203ENST00000394419 C9orf153Q5TBE3 101 aa7.32□□□□□ -1.24
ACTN1-203ENST00000394419 FAM240AA0A1B0GVK7 77 aa7.31□□□□□ -1.24
ACTN1-203ENST00000394419 APOC4P55056 127 aa7.31□□□□□ -1.24
ACTN1-203ENST00000394419 SMIM9A6NGZ8 99 aa7.31□□□□□ -1.24
ACTN1-203ENST00000394419 KRTAP10-3P60369 221 aa7.31□□□□□ -1.24
ACTN1-203ENST00000394419 SPAG11BQ08648 103 aa7.31□□□□□ -1.24
ACTN1-203ENST00000394419 C6orf223Q8N319 242 aa7.31□□□□□ -1.24
ACTN1-203ENST00000394419 KIR2DL5BQ8NHK3 375 aa7.31□□□□□ -1.24
ACTN1-203ENST00000394419 SMCR5Q8TEV8 140 aa7.31□□□□□ -1.24
ACTN1-203ENST00000394419 STAB1Q9NY15 2570 aa7.31□□□□□ -1.24
ACTN1-203ENST00000394419 C6orf99Q4VX62 202 aa7.31□□□□□ -1.24
ACTN1-203ENST00000394419 C9orf129Q5T035 196 aaKnown RBP7.31□□□□□ -1.24
ACTN1-203ENST00000394419 X6R8D5 127 aa7.31□□□□□ -1.24
ACTN1-203ENST00000394419 RPL18AQ02543 176 aaKnown RBP7.3□□□□□ -1.24
ACTN1-203ENST00000394419 XAGE1AQ9HD64 81 aa7.3□□□□□ -1.24
ACTN1-203ENST00000394419 UNQ6190/PRO20217Q6UXQ8 127 aa7.3□□□□□ -1.24
ACTN1-203ENST00000394419 FAM19A5Q7Z5A7 132 aaPredicted RBP7.29□□□□□ -1.24
ACTN1-203ENST00000394419 OTOGQ6ZRI0 2925 aa7.29□□□□□ -1.24
ACTN1-203ENST00000394419 FAM19A3Q7Z5A8 133 aa7.29□□□□□ -1.24
ACTN1-203ENST00000394419 CELA1Q9UNI1 258 aa7.29□□□□□ -1.24
ACTN1-203ENST00000394419 NSD1Q96L73 2696 aaPredicted RBP7.29□□□□□ -1.24
ACTN1-203ENST00000394419 SPART-AS1P0CW21 52 aa7.29□□□□□ -1.24
ACTN1-203ENST00000394419 Q6Q795 121 aa7.29□□□□□ -1.24
ACTN1-203ENST00000394419 CD164L2Q6UWJ8 174 aa7.29□□□□□ -1.24
ACTN1-203ENST00000394419 Q8IZM0 81 aa7.28□□□□□ -1.24
ACTN1-203ENST00000394419 TMEM126AQ9H061 195 aa7.28□□□□□ -1.24
ACTN1-203ENST00000394419 NBEAL1Q6ZS30 2694 aa7.28□□□□□ -1.24
ACTN1-203ENST00000394419 CXCL5P42830 114 aa7.28□□□□□ -1.24
ACTN1-203ENST00000394419 HIGD2BQ4VC39 106 aa7.28□□□□□ -1.24
ACTN1-203ENST00000394419 A0A087WVE0 104 aa7.28□□□□□ -1.24
ACTN1-203ENST00000394419 PDZD2O15018 2839 aa7.27□□□□□ -1.24
ACTN1-203ENST00000394419 LYRM9A8MSI8 78 aa7.27□□□□□ -1.25
ACTN1-203ENST00000394419 WFDC9Q8NEX5 89 aa7.26□□□□□ -1.25
ACTN1-203ENST00000394419 LINC00846Q9NV44 126 aa7.26□□□□□ -1.25
ACTN1-203ENST00000394419 A0A1B0GUV1 79 aa7.26□□□□□ -1.25
ACTN1-203ENST00000394419 ZNF561-AS1K7EIQ3 104 aa7.26□□□□□ -1.25
ACTN1-203ENST00000394419 A0A1B0GX51 115 aa7.25□□□□□ -1.25
ACTN1-203ENST00000394419 DEFB121Q5J5C9 76 aa7.25□□□□□ -1.25
ACTN1-203ENST00000394419 C10orf25Q5T742 122 aa7.25□□□□□ -1.25
ACTN1-203ENST00000394419 CYSRT1A8MQ03 144 aa7.25□□□□□ -1.25
ACTN1-203ENST00000394419 HAMPP81172 84 aa7.24□□□□□ -1.25
ACTN1-203ENST00000394419 RETNQ9HD89 108 aa7.24□□□□□ -1.25
ACTN1-203ENST00000394419 IGHV4-30-4P0DP06 118 aa7.24□□□□□ -1.25
ACTN1-203ENST00000394419 OXLD1Q5BKU9 147 aa7.24□□□□□ -1.25
ACTN1-203ENST00000394419 TRBV7-7A0A0K0K1E9 115 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms