RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 TRRAPQ9Y4A5 3859 aa13.63□□□□□ -0.23
RCCD1-201ENST00000394258 HIVEP1P15822 2718 aa13.62□□□□□ -0.23
RCCD1-201ENST00000394258 LINC00158P58513 81 aa13.62□□□□□ -0.23
RCCD1-201ENST00000394258 FAM218AQ96MZ4 157 aa13.62□□□□□ -0.23
RCCD1-201ENST00000394258 XCL1P47992 114 aa13.61□□□□□ -0.23
RCCD1-201ENST00000394258 TRBV7-7A0A0K0K1E9 115 aa13.61□□□□□ -0.23
RCCD1-201ENST00000394258 PFN2P35080 140 aa13.61□□□□□ -0.23
RCCD1-201ENST00000394258 LINC00959A0A1B0GUT2 108 aa13.6□□□□□ -0.23
RCCD1-201ENST00000394258 COPS9Q8WXC6 57 aa13.6□□□□□ -0.23
RCCD1-201ENST00000394258 LOC107984640A0A0U1RRK4 108 aa13.6□□□□□ -0.23
RCCD1-201ENST00000394258 FAM240AA0A1B0GVK7 77 aa13.6□□□□□ -0.23
RCCD1-201ENST00000394258 MRPL23Q16540 153 aaKnown RBP13.6□□□□□ -0.23
RCCD1-201ENST00000394258 DEFB121Q5J5C9 76 aa13.6□□□□□ -0.23
RCCD1-201ENST00000394258 TEP1Q99973 2627 aaKnown RBP13.59□□□□□ -0.23
RCCD1-201ENST00000394258 LINC00612Q8N6U2 182 aa13.59□□□□□ -0.23
RCCD1-201ENST00000394258 C9orf153Q5TBE3 101 aa13.58□□□□□ -0.23
RCCD1-201ENST00000394258 LINC00337Q8N6G1 96 aa13.58□□□□□ -0.23
RCCD1-201ENST00000394258 PRO0255Q9UI72 69 aa13.58□□□□□ -0.23
RCCD1-201ENST00000394258 IGKV2-28A0A075B6P5 120 aa13.58□□□□□ -0.24
RCCD1-201ENST00000394258 IGKV2D-28P01615 120 aa13.58□□□□□ -0.24
RCCD1-201ENST00000394258 A0A087WZ39 114 aa13.57□□□□□ -0.24
RCCD1-201ENST00000394258 PAX4O43316 350 aa13.57□□□□□ -0.24
RCCD1-201ENST00000394258 C9orf66Q5T8R8 295 aa13.57□□□□□ -0.24
RCCD1-201ENST00000394258 SND1-IT1Q9HBX3 110 aa13.57□□□□□ -0.24
RCCD1-201ENST00000394258 Q8N3U1 123 aa13.56□□□□□ -0.24
RCCD1-201ENST00000394258 C6orf226Q5I0X4 101 aa13.55□□□□□ -0.24
RCCD1-201ENST00000394258 Q9HAA7 133 aa13.55□□□□□ -0.24
RCCD1-201ENST00000394258 BAALC-AS2P0C853 105 aa13.54□□□□□ -0.24
RCCD1-201ENST00000394258 SMIM9A6NGZ8 99 aa13.54□□□□□ -0.24
RCCD1-201ENST00000394258 CCL18P55774 89 aa13.54□□□□□ -0.24
RCCD1-201ENST00000394258 TMEM126AQ9H061 195 aa13.54□□□□□ -0.24
RCCD1-201ENST00000394258 IGHV4-28A0A0C4DH34 117 aa13.53□□□□□ -0.24
RCCD1-201ENST00000394258 CRPP02741 224 aa13.53□□□□□ -0.24
RCCD1-201ENST00000394258 SS18Q15532 418 aa13.52□□□□□ -0.24
RCCD1-201ENST00000394258 GAGE2AQ6NT46 116 aa13.52□□□□□ -0.24
RCCD1-201ENST00000394258 C22orf24Q9Y442 160 aa13.52□□□□□ -0.24
RCCD1-201ENST00000394258 IGLV10-54A0A075B6I4 117 aa13.52□□□□□ -0.25
RCCD1-201ENST00000394258 HTN3P15516 51 aa13.51□□□□□ -0.25
RCCD1-201ENST00000394258 LINC00269Q8N2A0 174 aa13.51□□□□□ -0.25
RCCD1-201ENST00000394258 C3orf22Q8N5N4 141 aa13.51□□□□□ -0.25
RCCD1-201ENST00000394258 CELA1Q9UNI1 258 aa13.51□□□□□ -0.25
RCCD1-201ENST00000394258 TRAV13-2A0A0B4J235 113 aa13.5□□□□□ -0.25
RCCD1-201ENST00000394258 DAD1P61803 113 aa13.5□□□□□ -0.25
RCCD1-201ENST00000394258 SMIM11BQ8TCY0 68 aa13.49□□□□□ -0.25
RCCD1-201ENST00000394258 A0A1B0GUV1 79 aa13.49□□□□□ -0.25
RCCD1-201ENST00000394258 LYRM9A8MSI8 78 aa13.49□□□□□ -0.25
RCCD1-201ENST00000394258 LINC00643Q86TS7 51 aa13.49□□□□□ -0.25
RCCD1-201ENST00000394258 IBA57-AS1B1ANH7 110 aa13.48□□□□□ -0.25
RCCD1-201ENST00000394258 TRACP01848 142 aa13.48□□□□□ -0.25
RCCD1-201ENST00000394258 RPL28P46779 137 aaKnown RBP13.48□□□□□ -0.25
RCCD1-201ENST00000394258 A0A087WYN8 130 aa13.47□□□□□ -0.25
RCCD1-201ENST00000394258 ANGP03950 147 aaKnown RBP13.47□□□□□ -0.25
RCCD1-201ENST00000394258 ACYP1P07311 99 aa13.47□□□□□ -0.25
RCCD1-201ENST00000394258 APOC4P55056 127 aa13.47□□□□□ -0.25
RCCD1-201ENST00000394258 ATP5G1P05496 136 aa13.46□□□□□ -0.25
RCCD1-201ENST00000394258 OR13C6PQ8NH95 151 aa13.46□□□□□ -0.25
RCCD1-201ENST00000394258 C9orf129Q5T035 196 aaKnown RBP13.46□□□□□ -0.26
RCCD1-201ENST00000394258 SDIM1Q6ZPB5 146 aa13.46□□□□□ -0.26
RCCD1-201ENST00000394258 IMUPQ9GZP8 106 aa13.46□□□□□ -0.26
RCCD1-201ENST00000394258 CYSTM1Q9H1C7 97 aa13.45□□□□□ -0.26
RCCD1-201ENST00000394258 UQCRQO14949 82 aa13.44□□□□□ -0.26
RCCD1-201ENST00000394258 IGKV3D-7A0A0C4DH55 119 aa13.43□□□□□ -0.26
RCCD1-201ENST00000394258 hADV29S1A0JD25 119 aa13.43□□□□□ -0.26
RCCD1-201ENST00000394258 PRR3P79522 188 aaKnown RBP13.43□□□□□ -0.26
RCCD1-201ENST00000394258 Q8NAQ8 132 aa13.43□□□□□ -0.26
RCCD1-201ENST00000394258 CHCHD10Q8WYQ3 142 aaPredicted RBP13.43□□□□□ -0.26
RCCD1-201ENST00000394258 LINC00526Q96FQ7 95 aa13.42□□□□□ -0.26
RCCD1-201ENST00000394258 REG3AQ06141 175 aa13.42□□□□□ -0.26
RCCD1-201ENST00000394258 Q8IZM0 81 aa13.41□□□□□ -0.26
RCCD1-201ENST00000394258 IGHV4-30-4P0DP06 118 aa13.41□□□□□ -0.26
RCCD1-201ENST00000394258 MALP21145 153 aa13.4□□□□□ -0.26
RCCD1-201ENST00000394258 C9orf116Q5BN46 136 aaPredicted RBP13.4□□□□□ -0.26
RCCD1-201ENST00000394258 C14orf132Q9NPU4 83 aa13.4□□□□□ -0.26
RCCD1-201ENST00000394258 F8P00451 2351 aa13.39□□□□□ -0.27
RCCD1-201ENST00000394258 A0A087WVE0 104 aa13.39□□□□□ -0.27
RCCD1-201ENST00000394258 SLPIP03973 132 aa13.39□□□□□ -0.27
RCCD1-201ENST00000394258 CD164L2Q6UWJ8 174 aa13.39□□□□□ -0.27
RCCD1-201ENST00000394258 COX7CP15954 63 aa13.38□□□□□ -0.27
RCCD1-201ENST00000394258 C2orf48Q96LS8 159 aa13.38□□□□□ -0.27
RCCD1-201ENST00000394258 LECT2O14960 151 aa13.37□□□□□ -0.27
RCCD1-201ENST00000394258 SPART-AS1P0CW21 52 aa13.37□□□□□ -0.27
RCCD1-201ENST00000394258 MIFP14174 115 aa13.37□□□□□ -0.27
RCCD1-201ENST00000394258 FAM19A5Q7Z5A7 132 aaPredicted RBP13.37□□□□□ -0.27
RCCD1-201ENST00000394258 FLNBO75369 2602 aaKnown RBP13.37□□□□□ -0.27
RCCD1-201ENST00000394258 DNAL4O96015 105 aa13.36□□□□□ -0.27
RCCD1-201ENST00000394258 KIAA0087Q14695 138 aa13.36□□□□□ -0.27
RCCD1-201ENST00000394258 PKD1L1Q8TDX9 2849 aa13.34□□□□□ -0.27
RCCD1-201ENST00000394258 OXLD1Q5BKU9 147 aa13.34□□□□□ -0.27
RCCD1-201ENST00000394258 A0A1B0GX51 115 aa13.33□□□□□ -0.28
RCCD1-201ENST00000394258 KLK12Q9UKR0 248 aa13.33□□□□□ -0.28
RCCD1-201ENST00000394258 C6orf223Q8N319 242 aa13.33□□□□□ -0.28
RCCD1-201ENST00000394258 C5orf47Q569G3 176 aa13.32□□□□□ -0.28
RCCD1-201ENST00000394258 INAFM2P0DMQ5 153 aa13.32□□□□□ -0.28
RCCD1-201ENST00000394258 WFDC9Q8NEX5 89 aa13.32□□□□□ -0.28
RCCD1-201ENST00000394258 LINC00846Q9NV44 126 aa13.32□□□□□ -0.28
RCCD1-201ENST00000394258 H0YGX0 51 aa13.31□□□□□ -0.28
RCCD1-201ENST00000394258 RETNQ9HD89 108 aa13.31□□□□□ -0.28
RCCD1-201ENST00000394258 STAB1Q9NY15 2570 aa13.31□□□□□ -0.28
RCCD1-201ENST00000394258 NCR3O14931 201 aa13.31□□□□□ -0.28
RCCD1-201ENST00000394258 CXCL5P42830 114 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms