RNA–Protein interactions for RNA: ENST00000393572.5

FAM3A-205, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2 BASIC

Gene FAM3A, Length 1,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-205ENST00000393572 SMCO4Q9NRQ5 59 aa10.8□□□□□ -0.68
FAM3A-205ENST00000393572 TOMM7Q9P0U1 55 aa10.8□□□□□ -0.68
FAM3A-205ENST00000393572 FABP9Q0Z7S8 132 aa10.79□□□□□ -0.68
FAM3A-205ENST00000393572 C1orf137Q5JT78 98 aa10.79□□□□□ -0.68
FAM3A-205ENST00000393572 C2orf82Q6UX34 121 aa10.79□□□□□ -0.68
FAM3A-205ENST00000393572 FA2HQ7L5A8 372 aa10.79□□□□□ -0.68
FAM3A-205ENST00000393572 RPS10P5Q9NQ39 176 aa10.79□□□□□ -0.68
FAM3A-205ENST00000393572 TINCRA0A1B0GVN0 87 aa10.78□□□□□ -0.68
FAM3A-205ENST00000393572 MRPL18Q9H0U6 180 aaKnown RBP10.78□□□□□ -0.68
FAM3A-205ENST00000393572 CDKN2A-AS1Q9UH64 79 aa10.78□□□□□ -0.68
FAM3A-205ENST00000393572 FAM19A5Q7Z5A7 132 aaPredicted RBP10.77□□□□□ -0.69
FAM3A-205ENST00000393572 F8VRH5 84 aa10.76□□□□□ -0.69
FAM3A-205ENST00000393572 ODF1Q14990 250 aa10.76□□□□□ -0.69
FAM3A-205ENST00000393572 LINC00469Q8N7U9 141 aa10.76□□□□□ -0.69
FAM3A-205ENST00000393572 FAM168BA1KXE4 195 aa10.75□□□□□ -0.69
FAM3A-205ENST00000393572 M0QXV9 152 aa10.75□□□□□ -0.69
FAM3A-205ENST00000393572 NDUFA5Q16718 116 aa10.75□□□□□ -0.69
FAM3A-205ENST00000393572 PDZD11Q5EBL8 140 aa10.75□□□□□ -0.69
FAM3A-205ENST00000393572 DIRC1Q969H9 104 aa10.75□□□□□ -0.69
FAM3A-205ENST00000393572 IGLV7-43P04211 117 aa10.74□□□□□ -0.69
FAM3A-205ENST00000393572 UBE2BP63146 152 aa10.74□□□□□ -0.69
FAM3A-205ENST00000393572 PMVKQ15126 192 aa10.74□□□□□ -0.69
FAM3A-205ENST00000393572 CST9LQ9H4G1 147 aa10.74□□□□□ -0.69
FAM3A-205ENST00000393572 IGLV5-45A0A087WSX0 123 aa10.73□□□□□ -0.69
FAM3A-205ENST00000393572 KRTAP10-8P60410 259 aa10.73□□□□□ -0.69
FAM3A-205ENST00000393572 H3BRM9 83 aa10.72□□□□□ -0.69
FAM3A-205ENST00000393572 SNAPINO95295 136 aa10.72□□□□□ -0.69
FAM3A-205ENST00000393572 C9orf129Q5T035 196 aaKnown RBP10.72□□□□□ -0.69
FAM3A-205ENST00000393572 TRAPPC1Q9Y5R8 145 aa10.72□□□□□ -0.69
FAM3A-205ENST00000393572 SMIM1B2RUZ4 78 aa10.71□□□□□ -0.69
FAM3A-205ENST00000393572 LBHQ53QV2 105 aaPredicted RBP10.71□□□□□ -0.69
FAM3A-205ENST00000393572 SVBPQ8N300 66 aa10.71□□□□□ -0.69
FAM3A-205ENST00000393572 RAB5BP61020 215 aa10.7□□□□□ -0.7
FAM3A-205ENST00000393572 COX7B2Q8TF08 81 aa10.7□□□□□ -0.7
FAM3A-205ENST00000393572 APOC3P02656 99 aa10.69□□□□□ -0.7
FAM3A-205ENST00000393572 LINC00614P0C842 121 aa10.69□□□□□ -0.7
FAM3A-205ENST00000393572 TP73-AS1Q9UF72 201 aa10.68□□□□□ -0.7
FAM3A-205ENST00000393572 H0Y9J4 135 aa10.67□□□□□ -0.7
FAM3A-205ENST00000393572 NUPR1O60356 82 aa10.67□□□□□ -0.7
FAM3A-205ENST00000393572 HBDP02042 147 aa10.67□□□□□ -0.7
FAM3A-205ENST00000393572 KRTAP7-1Q8IUC3 87 aa10.67□□□□□ -0.7
FAM3A-205ENST00000393572 C18orf32Q8TCD1 76 aa10.66□□□□□ -0.7
FAM3A-205ENST00000393572 C22orf24Q9Y442 160 aa10.66□□□□□ -0.7
FAM3A-205ENST00000393572 ATP5LO75964 103 aa10.65□□□□□ -0.7
FAM3A-205ENST00000393572 IGLC3P0DOY3 106 aa10.65□□□□□ -0.7
FAM3A-205ENST00000393572 XAGE1AQ9HD64 81 aa10.65□□□□□ -0.7
FAM3A-205ENST00000393572 SPINK8P0C7L1 97 aa10.64□□□□□ -0.71
FAM3A-205ENST00000393572 NDUFA6P56556 154 aa10.63□□□□□ -0.71
FAM3A-205ENST00000393572 SFTA2Q6UW10 78 aa10.63□□□□□ -0.71
FAM3A-205ENST00000393572 KRTAP11-1Q8IUC1 163 aa10.63□□□□□ -0.71
FAM3A-205ENST00000393572 MRPL55Q7Z7F7 128 aaKnown RBP10.62□□□□□ -0.71
FAM3A-205ENST00000393572 IGLV1-50A0A075B6I6 118 aa10.61□□□□□ -0.71
FAM3A-205ENST00000393572 A0A096LNJ9 63 aa10.61□□□□□ -0.71
FAM3A-205ENST00000393572 IGLV5-39A0A0G2JS06 123 aa10.6□□□□□ -0.71
FAM3A-205ENST00000393572 ZNF861PO60384 105 aa10.6□□□□□ -0.71
FAM3A-205ENST00000393572 UBR4Q5T4S7 5183 aa10.6□□□□□ -0.71
FAM3A-205ENST00000393572 URB1-AS1Q96HZ7 61 aa10.59□□□□□ -0.71
FAM3A-205ENST00000393572 ZNF22P17026 224 aaPredicted RBP10.58□□□□□ -0.72
FAM3A-205ENST00000393572 RPL13AP40429 203 aaKnown RBP10.58□□□□□ -0.72
FAM3A-205ENST00000393572 BAGE3Q86Y29 109 aa10.58□□□□□ -0.72
FAM3A-205ENST00000393572 CHCHD1Q96BP2 118 aaKnown RBP10.58□□□□□ -0.72
FAM3A-205ENST00000393572 IGLV5-37A0A075B6J1 123 aa10.57□□□□□ -0.72
FAM3A-205ENST00000393572 COX17Q14061 63 aa10.57□□□□□ -0.72
FAM3A-205ENST00000393572 NKAPP1Q8N9T2 125 aa10.57□□□□□ -0.72
FAM3A-205ENST00000393572 RPL28P46779 137 aaKnown RBP10.56□□□□□ -0.72
FAM3A-205ENST00000393572 PMCHL1Q16048 86 aa10.56□□□□□ -0.72
FAM3A-205ENST00000393572 BCE1O60756 84 aa10.55□□□□□ -0.72
FAM3A-205ENST00000393572 TMEM170BQ5T4T1 132 aa10.55□□□□□ -0.72
FAM3A-205ENST00000393572 PRR26Q8N8Z3 221 aa10.55□□□□□ -0.72
FAM3A-205ENST00000393572 LINC00167Q96N53 147 aa10.54□□□□□ -0.72
FAM3A-205ENST00000393572 TRAV12-1A0A0B4J245 112 aa10.53□□□□□ -0.72
FAM3A-205ENST00000393572 KRTAP1-4P0C5Y4 121 aa10.53□□□□□ -0.72
FAM3A-205ENST00000393572 YPEL4Q96NS1 127 aa10.53□□□□□ -0.72
FAM3A-205ENST00000393572 ERG28Q9UKR5 140 aa10.53□□□□□ -0.72
FAM3A-205ENST00000393572 CHTOPQ9Y3Y2 248 aaKnown RBP10.53□□□□□ -0.72
FAM3A-205ENST00000393572 C11orf86A6NJI1 115 aa10.52□□□□□ -0.73
FAM3A-205ENST00000393572 PFN2P35080 140 aa10.52□□□□□ -0.73
FAM3A-205ENST00000393572 RPL24P83731 157 aaKnown RBP10.52□□□□□ -0.73
FAM3A-205ENST00000393572 IFI27L1Q96BM0 104 aa10.51□□□□□ -0.73
FAM3A-205ENST00000393572 RPL37AP8A6NKH3 93 aa10.49□□□□□ -0.73
FAM3A-205ENST00000393572 HSBP1O75506 76 aa10.49□□□□□ -0.73
FAM3A-205ENST00000393572 LRP2P98164 4655 aa10.49□□□□□ -0.73
FAM3A-205ENST00000393572 GAGE10A6NGK3 116 aa10.48□□□□□ -0.73
FAM3A-205ENST00000393572 SND1-IT1Q9HBX3 110 aa10.48□□□□□ -0.73
FAM3A-205ENST00000393572 UBE2AP49459 152 aa10.47□□□□□ -0.73
FAM3A-205ENST00000393572 ZNF625Q96I27 306 aaPredicted RBP10.47□□□□□ -0.73
FAM3A-205ENST00000393572 TMEM223A0PJW6 202 aa10.46□□□□□ -0.73
FAM3A-205ENST00000393572 LINC00587B1AMM8 73 aa10.45□□□□□ -0.74
FAM3A-205ENST00000393572 VPREB1P12018 145 aa10.45□□□□□ -0.74
FAM3A-205ENST00000393572 CBLN2Q8IUK8 224 aa10.45□□□□□ -0.74
FAM3A-205ENST00000393572 IGKV2-28A0A075B6P5 120 aa10.43□□□□□ -0.74
FAM3A-205ENST00000393572 IGKV2D-28P01615 120 aa10.43□□□□□ -0.74
FAM3A-205ENST00000393572 CRYGAP11844 174 aa10.43□□□□□ -0.74
FAM3A-205ENST00000393572 LINC00158P58513 81 aa10.43□□□□□ -0.74
FAM3A-205ENST00000393572 ATP6V1G1O75348 118 aa10.42□□□□□ -0.74
FAM3A-205ENST00000393572 HERV-K104P63124 156 aa10.42□□□□□ -0.74
FAM3A-205ENST00000393572 LEPROTL1O95214 131 aa10.41□□□□□ -0.74
FAM3A-205ENST00000393572 TRGC2P03986 189 aa10.41□□□□□ -0.74
FAM3A-205ENST00000393572 KRTAP13-1Q8IUC0 172 aa10.41□□□□□ -0.74
FAM3A-205ENST00000393572 FAM19A2Q8N3H0 131 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms