RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 IGLV5-45A0A087WSX0 123 aa11.56□□□□□ -0.56
PHTF1-205ENST00000393357 OXTP01178 125 aa11.56□□□□□ -0.56
PHTF1-205ENST00000393357 C9orf116Q5BN46 136 aaPredicted RBP11.56□□□□□ -0.56
PHTF1-205ENST00000393357 LINC01600Q96MT4 127 aa11.56□□□□□ -0.56
PHTF1-205ENST00000393357 F8P00451 2351 aa11.55□□□□□ -0.56
PHTF1-205ENST00000393357 RPL28P46779 137 aaKnown RBP11.55□□□□□ -0.56
PHTF1-205ENST00000393357 HAMPP81172 84 aa11.55□□□□□ -0.56
PHTF1-205ENST00000393357 ITPR3Q14573 2671 aa11.55□□□□□ -0.56
PHTF1-205ENST00000393357 SCXQ7RTU7 201 aa11.54□□□□□ -0.56
PHTF1-205ENST00000393357 C5orf47Q569G3 176 aa11.54□□□□□ -0.56
PHTF1-205ENST00000393357 ODF3L2Q3SX64 289 aa11.54□□□□□ -0.56
PHTF1-205ENST00000393357 SERP2Q8N6R1 65 aa11.54□□□□□ -0.56
PHTF1-205ENST00000393357 FHL2Q14192 279 aa11.53□□□□□ -0.56
PHTF1-205ENST00000393357 DPH3Q96FX2 82 aa11.53□□□□□ -0.56
PHTF1-205ENST00000393357 SNURFQ9Y675 71 aa11.53□□□□□ -0.56
PHTF1-205ENST00000393357 ORMDL1Q9P0S3 153 aa11.52□□□□□ -0.57
PHTF1-205ENST00000393357 ZNF702PQ9H963 129 aa11.52□□□□□ -0.57
PHTF1-205ENST00000393357 CRYGAP11844 174 aa11.51□□□□□ -0.57
PHTF1-205ENST00000393357 DEFB114Q30KQ6 69 aa11.5□□□□□ -0.57
PHTF1-205ENST00000393357 LAMTOR3Q9UHA4 124 aa11.5□□□□□ -0.57
PHTF1-205ENST00000393357 Q8N3U1 123 aa11.49□□□□□ -0.57
PHTF1-205ENST00000393357 DEFB4AO15263 64 aa11.49□□□□□ -0.57
PHTF1-205ENST00000393357 FAM222AQ5U5X8 452 aa11.48□□□□□ -0.57
PHTF1-205ENST00000393357 ZNF469Q96JG9 3925 aaPredicted RBP11.47□□□□□ -0.57
PHTF1-205ENST00000393357 M0R2N4 97 aa11.46□□□□□ -0.58
PHTF1-205ENST00000393357 LINC00269Q8N2A0 174 aa11.46□□□□□ -0.58
PHTF1-205ENST00000393357 H0YGX0 51 aa11.45□□□□□ -0.58
PHTF1-205ENST00000393357 UNC79Q9P2D8 2635 aa11.45□□□□□ -0.58
PHTF1-205ENST00000393357 CR1P17927 2039 aa11.45□□□□□ -0.58
PHTF1-205ENST00000393357 C6orf99Q4VX62 202 aa11.45□□□□□ -0.58
PHTF1-205ENST00000393357 TMEM86BQ8N661 226 aa11.45□□□□□ -0.58
PHTF1-205ENST00000393357 LINC01356Q8N9X3 169 aa11.45□□□□□ -0.58
PHTF1-205ENST00000393357 UPK3BQ9BT76 320 aa11.45□□□□□ -0.58
PHTF1-205ENST00000393357 Q6JHZ5 121 aa11.44□□□□□ -0.58
PHTF1-205ENST00000393357 SPATA3Q8NHX4 192 aa11.44□□□□□ -0.58
PHTF1-205ENST00000393357 S100A7L2Q5SY68 101 aa11.43□□□□□ -0.58
PHTF1-205ENST00000393357 IGHV3OR16-9A0A0B4J2B5 98 aa11.42□□□□□ -0.58
PHTF1-205ENST00000393357 USP24Q9UPU5 2620 aa11.42□□□□□ -0.58
PHTF1-205ENST00000393357 PF4P02776 101 aa11.41□□□□□ -0.58
PHTF1-205ENST00000393357 TMEM258P61165 79 aa11.41□□□□□ -0.58
PHTF1-205ENST00000393357 SS18Q15532 418 aa11.41□□□□□ -0.58
PHTF1-205ENST00000393357 UBL5Q9BZL1 73 aa11.41□□□□□ -0.58
PHTF1-205ENST00000393357 TRBV6-8A0A0A6YYG3 113 aa11.4□□□□□ -0.58
PHTF1-205ENST00000393357 TRBV6-4A0A1B0GX49 114 aa11.4□□□□□ -0.58
PHTF1-205ENST00000393357 CCKP06307 115 aa11.4□□□□□ -0.58
PHTF1-205ENST00000393357 LINC00959A0A1B0GUT2 108 aa11.39□□□□□ -0.59
PHTF1-205ENST00000393357 GYPEP15421 78 aa11.39□□□□□ -0.59
PHTF1-205ENST00000393357 HTN3P15516 51 aa11.39□□□□□ -0.59
PHTF1-205ENST00000393357 PRORYQ9H606 182 aa11.39□□□□□ -0.59
PHTF1-205ENST00000393357 RMI2Q96E14 147 aa11.39□□□□□ -0.59
PHTF1-205ENST00000393357 OVOL2Q9BRP0 275 aa11.39□□□□□ -0.59
PHTF1-205ENST00000393357 TRBV10-1A0A0K0K1A3 114 aa11.39□□□□□ -0.59
PHTF1-205ENST00000393357 IBA57-AS1B1ANH7 110 aa11.38□□□□□ -0.59
PHTF1-205ENST00000393357 VWFP04275 2813 aa11.38□□□□□ -0.59
PHTF1-205ENST00000393357 Q8N814 137 aa11.37□□□□□ -0.59
PHTF1-205ENST00000393357 KRTAP10-9P60411 292 aa11.37□□□□□ -0.59
PHTF1-205ENST00000393357 TRAV10A0A0B4J240 114 aa11.37□□□□□ -0.59
PHTF1-205ENST00000393357 C6orf223Q8N319 242 aa11.37□□□□□ -0.59
PHTF1-205ENST00000393357 PKIGQ9Y2B9 76 aa11.37□□□□□ -0.59
PHTF1-205ENST00000393357 CCL24O00175 119 aa11.36□□□□□ -0.59
PHTF1-205ENST00000393357 ANGP03950 147 aaKnown RBP11.36□□□□□ -0.59
PHTF1-205ENST00000393357 Q6YL49 198 aa11.36□□□□□ -0.59
PHTF1-205ENST00000393357 ZNF843Q8N446 348 aa11.35□□□□□ -0.59
PHTF1-205ENST00000393357 Q8N9L7 120 aa11.35□□□□□ -0.59
PHTF1-205ENST00000393357 XAGE1AQ9HD64 81 aa11.35□□□□□ -0.59
PHTF1-205ENST00000393357 A0A096LNT2 108 aa11.35□□□□□ -0.59
PHTF1-205ENST00000393357 DAD1P61803 113 aa11.35□□□□□ -0.59
PHTF1-205ENST00000393357 A0A087WZ39 114 aa11.34□□□□□ -0.59
PHTF1-205ENST00000393357 Q8NDZ9 215 aa11.33□□□□□ -0.59
PHTF1-205ENST00000393357 C1orf43Q9BWL3 253 aa11.33□□□□□ -0.59
PHTF1-205ENST00000393357 PDZD2O15018 2839 aa11.33□□□□□ -0.6
PHTF1-205ENST00000393357 FAM236DA0A1B0GTK5 79 aa11.33□□□□□ -0.6
PHTF1-205ENST00000393357 FAM236CP0DP71 79 aa11.33□□□□□ -0.6
PHTF1-205ENST00000393357 PRB2P02812 416 aaPredicted RBP11.32□□□□□ -0.6
PHTF1-205ENST00000393357 A0A0U1RQV1 116 aa11.32□□□□□ -0.6
PHTF1-205ENST00000393357 RBM3P98179 157 aaKnown RBP11.32□□□□□ -0.6
PHTF1-205ENST00000393357 Q5XG85 94 aa11.32□□□□□ -0.6
PHTF1-205ENST00000393357 Q6ZQY7 126 aa11.32□□□□□ -0.6
PHTF1-205ENST00000393357 C4orf3Q8WVX3 66 aa11.32□□□□□ -0.6
PHTF1-205ENST00000393357 BBC3Q96PG8 261 aaPredicted RBP11.31□□□□□ -0.6
PHTF1-205ENST00000393357 UBR5O95071 2799 aaPredicted RBP11.31□□□□□ -0.6
PHTF1-205ENST00000393357 TMEM256-PLSCR3K7ERE1 68 aa11.31□□□□□ -0.6
PHTF1-205ENST00000393357 NANOS2P60321 138 aaKnown RBP11.31□□□□□ -0.6
PHTF1-205ENST00000393357 TEP1Q99973 2627 aaKnown RBP11.31□□□□□ -0.6
PHTF1-205ENST00000393357 GIG44P09565 113 aaPredicted RBP11.3□□□□□ -0.6
PHTF1-205ENST00000393357 F8WEM9 126 aa11.3□□□□□ -0.6
PHTF1-205ENST00000393357 MPLKIPQ8TAP9 179 aa11.3□□□□□ -0.6
PHTF1-205ENST00000393357 C10orf25Q5T742 122 aa11.3□□□□□ -0.6
PHTF1-205ENST00000393357 HIVEP1P15822 2718 aa11.29□□□□□ -0.6
PHTF1-205ENST00000393357 UNQ6190/PRO20217Q6UXQ8 127 aa11.29□□□□□ -0.6
PHTF1-205ENST00000393357 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.29□□□□□ -0.6
PHTF1-205ENST00000393357 LINC00474Q9P2X8 69 aa11.29□□□□□ -0.6
PHTF1-205ENST00000393357 JMJD7-PLA2G4BH0Y9G9 81 aa11.29□□□□□ -0.6
PHTF1-205ENST00000393357 RPS28P62857 69 aaKnown RBP11.28□□□□□ -0.6
PHTF1-205ENST00000393357 PLAC8L1A1L4L8 177 aa11.28□□□□□ -0.6
PHTF1-205ENST00000393357 LINC01006Q8NI28 216 aa11.28□□□□□ -0.6
PHTF1-205ENST00000393357 LINC00336Q6ZUF6 198 aa11.28□□□□□ -0.6
PHTF1-205ENST00000393357 IGHV4-31P0DP07 118 aa11.27□□□□□ -0.61
PHTF1-205ENST00000393357 ATRQ13535 2644 aa11.27□□□□□ -0.61
PHTF1-205ENST00000393357 C16orf74Q96GX8 76 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms