RNA–Protein interactions for RNA: ENST00000392590.3

CDCA4-202, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-202ENST00000392590 PCLOQ9Y6V0 5065 aa13.12□□□□□ -0.31
CDCA4-202ENST00000392590 SMIM1B2RUZ4 78 aa13.12□□□□□ -0.31
CDCA4-202ENST00000392590 ABCA13Q86UQ4 5058 aa13.11□□□□□ -0.31
CDCA4-202ENST00000392590 H3BRM9 83 aa13.11□□□□□ -0.31
CDCA4-202ENST00000392590 INAFM2P0DMQ5 153 aa13.11□□□□□ -0.31
CDCA4-202ENST00000392590 IFI27L1Q96BM0 104 aa13.11□□□□□ -0.31
CDCA4-202ENST00000392590 TRBV30A0A0K0K1B3 111 aa13.1□□□□□ -0.31
CDCA4-202ENST00000392590 SPINK8P0C7L1 97 aa13.09□□□□□ -0.31
CDCA4-202ENST00000392590 LINC00310P59036 64 aa13.09□□□□□ -0.31
CDCA4-202ENST00000392590 TLX1NBP0CAT3 122 aa13.08□□□□□ -0.31
CDCA4-202ENST00000392590 COX7B2Q8TF08 81 aa13.08□□□□□ -0.32
CDCA4-202ENST00000392590 CHTOPQ9Y3Y2 248 aaKnown RBP13.08□□□□□ -0.32
CDCA4-202ENST00000392590 ZNF22P17026 224 aaPredicted RBP13.07□□□□□ -0.32
CDCA4-202ENST00000392590 RPL37AP61513 92 aaKnown RBP13.07□□□□□ -0.32
CDCA4-202ENST00000392590 Q6ZRP5 223 aa13.07□□□□□ -0.32
CDCA4-202ENST00000392590 TRAV12-1A0A0B4J245 112 aa13.06□□□□□ -0.32
CDCA4-202ENST00000392590 NUPR1O60356 82 aa13.06□□□□□ -0.32
CDCA4-202ENST00000392590 CXCL5P42830 114 aa13.06□□□□□ -0.32
CDCA4-202ENST00000392590 C11orf86A6NJI1 115 aa13.05□□□□□ -0.32
CDCA4-202ENST00000392590 F8VRH5 84 aa13.05□□□□□ -0.32
CDCA4-202ENST00000392590 LEPROTL1O95214 131 aa13.05□□□□□ -0.32
CDCA4-202ENST00000392590 C9orf116Q5BN46 136 aaPredicted RBP13.05□□□□□ -0.32
CDCA4-202ENST00000392590 C7orf33Q8WU49 177 aa13.05□□□□□ -0.32
CDCA4-202ENST00000392590 GAGE2EQ4V326 116 aa13.04□□□□□ -0.32
CDCA4-202ENST00000392590 GAGE2DQ9UEU5 116 aa13.04□□□□□ -0.32
CDCA4-202ENST00000392590 A0A1W2PNN7 141 aa13.03□□□□□ -0.32
CDCA4-202ENST00000392590 NDUFC2-KCTD14E9PQ53 114 aa13.03□□□□□ -0.32
CDCA4-202ENST00000392590 HIST1H2BKO60814 126 aa13.03□□□□□ -0.32
CDCA4-202ENST00000392590 HIST1H2BJP06899 126 aa13.03□□□□□ -0.32
CDCA4-202ENST00000392590 S100A1P23297 94 aa13.03□□□□□ -0.32
CDCA4-202ENST00000392590 HIST1H2BOP23527 126 aa13.03□□□□□ -0.32
CDCA4-202ENST00000392590 HIST1H2BBP33778 126 aa13.03□□□□□ -0.32
CDCA4-202ENST00000392590 HIST1H2BDP58876 126 aa13.03□□□□□ -0.32
CDCA4-202ENST00000392590 KRTAP10-4P60372 401 aaPredicted RBP13.03□□□□□ -0.32
CDCA4-202ENST00000392590 HIST1H2BCP62807 126 aa13.03□□□□□ -0.32
CDCA4-202ENST00000392590 HIST2H2BEQ16778 126 aa13.03□□□□□ -0.32
CDCA4-202ENST00000392590 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.03□□□□□ -0.32
CDCA4-202ENST00000392590 TMEM170BQ5T4T1 132 aa13.03□□□□□ -0.32
CDCA4-202ENST00000392590 HIST1H2BHQ93079 126 aa13.03□□□□□ -0.32
CDCA4-202ENST00000392590 HIST1H2BNQ99877 126 aa13.03□□□□□ -0.32
CDCA4-202ENST00000392590 HIST1H2BMQ99879 126 aa13.03□□□□□ -0.32
CDCA4-202ENST00000392590 SRRM2Q9UQ35 2752 aaKnown RBP13.03□□□□□ -0.32
CDCA4-202ENST00000392590 HSPB8Q9UJY1 196 aa13.02□□□□□ -0.33
CDCA4-202ENST00000392590 FABP4P15090 132 aa13.01□□□□□ -0.33
CDCA4-202ENST00000392590 IGLV5-39A0A0G2JS06 123 aa13□□□□□ -0.33
CDCA4-202ENST00000392590 H0Y8G0 127 aa13□□□□□ -0.33
CDCA4-202ENST00000392590 VPS13BQ7Z7G8 4022 aa13□□□□□ -0.33
CDCA4-202ENST00000392590 ATP6V1G1O75348 118 aa12.98□□□□□ -0.33
CDCA4-202ENST00000392590 FAM168BA1KXE4 195 aa12.96□□□□□ -0.33
CDCA4-202ENST00000392590 ODF1Q14990 250 aa12.96□□□□□ -0.33
CDCA4-202ENST00000392590 TMEM223A0PJW6 202 aa12.94□□□□□ -0.34
CDCA4-202ENST00000392590 C9orf129Q5T035 196 aaKnown RBP12.94□□□□□ -0.34
CDCA4-202ENST00000392590 FAM19A5Q7Z5A7 132 aaPredicted RBP12.93□□□□□ -0.34
CDCA4-202ENST00000392590 PHF5AQ7RTV0 110 aaKnown RBP12.93□□□□□ -0.34
CDCA4-202ENST00000392590 MAP1LC3CQ9BXW4 147 aa12.93□□□□□ -0.34
CDCA4-202ENST00000392590 XAGE1AQ9HD64 81 aa12.93□□□□□ -0.34
CDCA4-202ENST00000392590 PLNP26678 52 aa12.9□□□□□ -0.34
CDCA4-202ENST00000392590 HNRNPA3P51991 378 aaKnown RBP12.9□□□□□ -0.34
CDCA4-202ENST00000392590 PRR3P79522 188 aaKnown RBP12.9□□□□□ -0.34
CDCA4-202ENST00000392590 SFTA2Q6UW10 78 aa12.89□□□□□ -0.35
CDCA4-202ENST00000392590 KRTAP7-1Q8IUC3 87 aa12.89□□□□□ -0.35
CDCA4-202ENST00000392590 COA6Q5JTJ3 125 aaKnown RBP12.88□□□□□ -0.35
CDCA4-202ENST00000392590 DPM2O94777 84 aa12.88□□□□□ -0.35
CDCA4-202ENST00000392590 PFN2P35080 140 aa12.88□□□□□ -0.35
CDCA4-202ENST00000392590 ZNF625Q96I27 306 aaPredicted RBP12.88□□□□□ -0.35
CDCA4-202ENST00000392590 PMCHL2Q9BQD1 86 aa12.88□□□□□ -0.35
CDCA4-202ENST00000392590 M0QXV9 152 aa12.87□□□□□ -0.35
CDCA4-202ENST00000392590 FLG2Q5D862 2391 aaPredicted RBP12.86□□□□□ -0.35
CDCA4-202ENST00000392590 ERG28Q9UKR5 140 aa12.86□□□□□ -0.35
CDCA4-202ENST00000392590 IGKCP01834 107 aa12.85□□□□□ -0.35
CDCA4-202ENST00000392590 SERTAD4-AS1Q5TG53 156 aa12.85□□□□□ -0.35
CDCA4-202ENST00000392590 SYS1-DBNDD2H3BUS1 97 aa12.84□□□□□ -0.35
CDCA4-202ENST00000392590 COX17Q14061 63 aa12.84□□□□□ -0.35
CDCA4-202ENST00000392590 PSORS1C2Q9UIG4 136 aa12.84□□□□□ -0.35
CDCA4-202ENST00000392590 C22orf24Q9Y442 160 aa12.83□□□□□ -0.36
CDCA4-202ENST00000392590 UBE2BP63146 152 aa12.82□□□□□ -0.36
CDCA4-202ENST00000392590 HERVK_113P61574 105 aa12.81□□□□□ -0.36
CDCA4-202ENST00000392590 LBHQ53QV2 105 aaPredicted RBP12.8□□□□□ -0.36
CDCA4-202ENST00000392590 C1orf137Q5JT78 98 aa12.8□□□□□ -0.36
CDCA4-202ENST00000392590 KRTAP11-1Q8IUC1 163 aa12.8□□□□□ -0.36
CDCA4-202ENST00000392590 KRTAP29-1A8MX34 341 aaPredicted RBP12.79□□□□□ -0.36
CDCA4-202ENST00000392590 LEPROTO15243 131 aa12.79□□□□□ -0.36
CDCA4-202ENST00000392590 LINC00158P58513 81 aa12.79□□□□□ -0.36
CDCA4-202ENST00000392590 PET117Q6UWS5 81 aa12.79□□□□□ -0.36
CDCA4-202ENST00000392590 PLEKHB2Q96CS7 222 aa12.79□□□□□ -0.36
CDCA4-202ENST00000392590 SND1-IT1Q9HBX3 110 aa12.79□□□□□ -0.36
CDCA4-202ENST00000392590 NDUFA12Q9UI09 145 aa12.79□□□□□ -0.36
CDCA4-202ENST00000392590 PLA2G2DQ9UNK4 145 aa12.79□□□□□ -0.36
CDCA4-202ENST00000392590 HERV-K104P63124 156 aa12.78□□□□□ -0.36
CDCA4-202ENST00000392590 J3QL48 77 aa12.78□□□□□ -0.36
CDCA4-202ENST00000392590 LINC01545Q5VT33 79 aa12.78□□□□□ -0.36
CDCA4-202ENST00000392590 TP73-AS1Q9UF72 201 aa12.78□□□□□ -0.36
CDCA4-202ENST00000392590 MYCBP2O75592 4640 aa12.77□□□□□ -0.36
CDCA4-202ENST00000392590 A0A0U1RRA0 63 aa12.77□□□□□ -0.37
CDCA4-202ENST00000392590 MYMXA0A1B0GTQ4 84 aa12.77□□□□□ -0.37
CDCA4-202ENST00000392590 OXTP01178 125 aa12.77□□□□□ -0.37
CDCA4-202ENST00000392590 C3orf79P0CE67 100 aa12.77□□□□□ -0.37
CDCA4-202ENST00000392590 MRPL55Q7Z7F7 128 aaKnown RBP12.77□□□□□ -0.37
CDCA4-202ENST00000392590 J3QQQ9 107 aa12.76□□□□□ -0.37
CDCA4-202ENST00000392590 TSPEAR-AS2P59090 65 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms