RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 ARHGEF5Q12774 1597 aa-3.65□□□□□ -2.99
RNU6-239P-201ENST00000390990 ROCK1Q13464 1354 aa-3.65□□□□□ -2.99
RNU6-239P-201ENST00000390990 MYOM1P52179 1685 aa-3.65□□□□□ -2.99
RNU6-239P-201ENST00000390990 PSME4Q14997 1843 aa-3.65□□□□□ -2.99
RNU6-239P-201ENST00000390990 DYNC2H1Q8NCM8 4307 aaKnown RBP-3.66□□□□□ -3
RNU6-239P-201ENST00000390990 LRBAP50851 2863 aa-3.66□□□□□ -3
RNU6-239P-201ENST00000390990 CFAP46Q8IYW2 2715 aa-3.66□□□□□ -3
RNU6-239P-201ENST00000390990 A0A1B0GX51 115 aa-3.66□□□□□ -3
RNU6-239P-201ENST00000390990 SEC11AP67812 179 aa-3.66□□□□□ -3
RNU6-239P-201ENST00000390990 TSLPQ969D9 159 aa-3.66□□□□□ -3
RNU6-239P-201ENST00000390990 TET3O43151 1660 aa-3.66□□□□□ -3
RNU6-239P-201ENST00000390990 ANKRD30AQ9BXX3 1397 aa-3.66□□□□□ -3
RNU6-239P-201ENST00000390990 DNAH17Q9UFH2 4485 aa-3.67□□□□□ -3
RNU6-239P-201ENST00000390990 MRPL54Q6P161 138 aaKnown RBP-3.67□□□□□ -3
RNU6-239P-201ENST00000390990 SELENOSQ9BQE4 189 aa-3.67□□□□□ -3
RNU6-239P-201ENST00000390990 PCBD2Q9H0N5 130 aa-3.67□□□□□ -3
RNU6-239P-201ENST00000390990 PRO1933Q9H354 126 aa-3.67□□□□□ -3
RNU6-239P-201ENST00000390990 MYH7P12883 1935 aa-3.68□□□□□ -3
RNU6-239P-201ENST00000390990 LOC285095A0A1B0GVY8 99 aa-3.68□□□□□ -3
RNU6-239P-201ENST00000390990 TMEM238C9JI98 176 aa-3.68□□□□□ -3
RNU6-239P-201ENST00000390990 TFAMQ00059 246 aaKnown RBP-3.68□□□□□ -3
RNU6-239P-201ENST00000390990 NXT2Q9NPJ8 142 aaKnown RBP-3.68□□□□□ -3
RNU6-239P-201ENST00000390990 BPTFQ12830 3046 aa-3.68□□□□□ -3
RNU6-239P-201ENST00000390990 PLEKHH2Q8IVE3 1493 aa-3.69□□□□□ -3
RNU6-239P-201ENST00000390990 NLRP1Q9C000 1473 aa-3.69□□□□□ -3
RNU6-239P-201ENST00000390990 BCORQ6W2J9 1755 aa-3.69□□□□□ -3
RNU6-239P-201ENST00000390990 MMGT1Q8N4V1 131 aa-3.7□□□□□ -3
RNU6-239P-201ENST00000390990 SMG1Q96Q15 3661 aaKnown RBP-3.7□□□□□ -3
RNU6-239P-201ENST00000390990 SPEF2Q9C093 1822 aa-3.7□□□□□ -3
RNU6-239P-201ENST00000390990 IGLC6P0CF74 106 aa-3.71□□□□□ -3
RNU6-239P-201ENST00000390990 FAM223AQ8IWN6 122 aa-3.71□□□□□ -3
RNU6-239P-201ENST00000390990 HIST1H1DP16402 221 aaKnown RBP-3.72□□□□□ -3
RNU6-239P-201ENST00000390990 A0A1B0GU69 56 aa-3.73□□□□□ -3.01
RNU6-239P-201ENST00000390990 WHAMMP3Q1A5X7 153 aa-3.73□□□□□ -3.01
RNU6-239P-201ENST00000390990 MYOZ3Q8TDC0 251 aa-3.73□□□□□ -3.01
RNU6-239P-201ENST00000390990 DNAH5Q8TE73 4624 aa-3.74□□□□□ -3.01
RNU6-239P-201ENST00000390990 TMEM191AQ9H0A3 160 aa-3.74□□□□□ -3.01
RNU6-239P-201ENST00000390990 KIAA1551Q9HCM1 1747 aa-3.74□□□□□ -3.01
RNU6-239P-201ENST00000390990 FGF7P21781 194 aa-3.75□□□□□ -3.01
RNU6-239P-201ENST00000390990 S100GP29377 79 aa-3.75□□□□□ -3.01
RNU6-239P-201ENST00000390990 CHMP6Q96FZ7 201 aa-3.75□□□□□ -3.01
RNU6-239P-201ENST00000390990 TPT1P8Q9HAU6 139 aa-3.75□□□□□ -3.01
RNU6-239P-201ENST00000390990 ARL2-SNX15V9GYD0 113 aa-3.75□□□□□ -3.01
RNU6-239P-201ENST00000390990 COPZ2Q9P299 210 aa-3.76□□□□□ -3.01
RNU6-239P-201ENST00000390990 TRRAPQ9Y4A5 3859 aa-3.76□□□□□ -3.01
RNU6-239P-201ENST00000390990 MBD5Q9P267 1494 aa-3.77□□□□□ -3.01
RNU6-239P-201ENST00000390990 PIGBOS1A0A0B4J2F0 54 aa-3.77□□□□□ -3.01
RNU6-239P-201ENST00000390990 C5orf38Q86SI9 138 aa-3.77□□□□□ -3.01
RNU6-239P-201ENST00000390990 SCN7AQ01118 1682 aa-3.78□□□□□ -3.01
RNU6-239P-201ENST00000390990 OVOS2A0A0J9YW53 1432 aa-3.78□□□□□ -3.01
RNU6-239P-201ENST00000390990 CLIP1P30622 1438 aa-3.78□□□□□ -3.01
RNU6-239P-201ENST00000390990 OVOS2Q6IE36 1432 aa-3.78□□□□□ -3.01
RNU6-239P-201ENST00000390990 EDC4Q6P2E9 1401 aaKnown RBP-3.78□□□□□ -3.01
RNU6-239P-201ENST00000390990 LINC00694P0DN24 101 aa-3.78□□□□□ -3.01
RNU6-239P-201ENST00000390990 G0S2P27469 103 aa-3.78□□□□□ -3.01
RNU6-239P-201ENST00000390990 SNCAP37840 140 aa-3.78□□□□□ -3.01
RNU6-239P-201ENST00000390990 MORN2Q502X0 79 aa-3.78□□□□□ -3.01
RNU6-239P-201ENST00000390990 V9GYQ6 96 aa-3.78□□□□□ -3.01
RNU6-239P-201ENST00000390990 LRRC37AA6NMS7 1700 aa-3.78□□□□□ -3.02
RNU6-239P-201ENST00000390990 CHKB-CPT1BH3BT56 60 aa-3.79□□□□□ -3.02
RNU6-239P-201ENST00000390990 SKA2Q8WVK7 121 aaPredicted RBP-3.79□□□□□ -3.02
RNU6-239P-201ENST00000390990 NUP188Q5SRE5 1749 aa-3.79□□□□□ -3.02
RNU6-239P-201ENST00000390990 SPTBN5Q9NRC6 3674 aaKnown RBP-3.79□□□□□ -3.02
RNU6-239P-201ENST00000390990 ALKQ9UM73 1620 aa-3.8□□□□□ -3.02
RNU6-239P-201ENST00000390990 AIF1LQ9BQI0 150 aa-3.8□□□□□ -3.02
RNU6-239P-201ENST00000390990 SMPXQ9UHP9 88 aa-3.8□□□□□ -3.02
RNU6-239P-201ENST00000390990 ADGRL2O95490 1459 aa-3.8□□□□□ -3.02
RNU6-239P-201ENST00000390990 PDCD11Q14690 1871 aaKnown RBP-3.81□□□□□ -3.02
RNU6-239P-201ENST00000390990 ANKRD36A6QL64 1941 aa-3.81□□□□□ -3.02
RNU6-239P-201ENST00000390990 MT1EP04732 61 aa-3.81□□□□□ -3.02
RNU6-239P-201ENST00000390990 CCDC153Q494R4 210 aa-3.81□□□□□ -3.02
RNU6-239P-201ENST00000390990 KCNRGQ8N5I3 272 aa-3.81□□□□□ -3.02
RNU6-239P-201ENST00000390990 SMG6Q86US8 1419 aaKnown RBP-3.81□□□□□ -3.02
RNU6-239P-201ENST00000390990 A0A1B0GV72 72 aa-3.82□□□□□ -3.02
RNU6-239P-201ENST00000390990 TSPAN19P0C672 248 aa-3.82□□□□□ -3.02
RNU6-239P-201ENST00000390990 GUCA1AP43080 201 aaPredicted RBP-3.82□□□□□ -3.02
RNU6-239P-201ENST00000390990 C6orf201Q7Z4U5 140 aa-3.82□□□□□ -3.02
RNU6-239P-201ENST00000390990 EHBP1L1Q8N3D4 1523 aa-3.82□□□□□ -3.02
RNU6-239P-201ENST00000390990 SMR3BP02814 79 aaPredicted RBP-3.83□□□□□ -3.02
RNU6-239P-201ENST00000390990 DBIP07108 87 aaKnown RBP-3.83□□□□□ -3.02
RNU6-239P-201ENST00000390990 DNAH10Q8IVF4 4471 aa-3.83□□□□□ -3.02
RNU6-239P-201ENST00000390990 RGPD2P0DJD1 1756 aa-3.84□□□□□ -3.02
RNU6-239P-201ENST00000390990 SPTY2D1-AS1A0A0U1RR47 76 aa-3.84□□□□□ -3.02
RNU6-239P-201ENST00000390990 A0A1B0GWA3 101 aa-3.84□□□□□ -3.02
RNU6-239P-201ENST00000390990 H7BZZ5 65 aa-3.84□□□□□ -3.02
RNU6-239P-201ENST00000390990 A0A087WVE0 104 aa-3.85□□□□□ -3.03
RNU6-239P-201ENST00000390990 GNG10P50151 68 aa-3.85□□□□□ -3.03
RNU6-239P-201ENST00000390990 C9orf153Q5TBE3 101 aa-3.85□□□□□ -3.03
RNU6-239P-201ENST00000390990 C12orf73Q69YU5 71 aa-3.85□□□□□ -3.03
RNU6-239P-201ENST00000390990 SPTAN1Q13813 2472 aaKnown RBP-3.85□□□□□ -3.03
RNU6-239P-201ENST00000390990 GINS2Q9Y248 185 aa-3.86□□□□□ -3.03
RNU6-239P-201ENST00000390990 TCHHQ07283 1943 aa-3.86□□□□□ -3.03
RNU6-239P-201ENST00000390990 SHROOM2Q13796 1616 aa-3.87□□□□□ -3.03
RNU6-239P-201ENST00000390990 FAM223BA6NKX1 122 aa-3.87□□□□□ -3.03
RNU6-239P-201ENST00000390990 E5RI56 91 aa-3.87□□□□□ -3.03
RNU6-239P-201ENST00000390990 LSM10Q969L4 123 aaKnown RBP-3.87□□□□□ -3.03
RNU6-239P-201ENST00000390990 LINC00846Q9NV44 126 aa-3.87□□□□□ -3.03
RNU6-239P-201ENST00000390990 UQCR10Q9UDW1 63 aa-3.87□□□□□ -3.03
RNU6-239P-201ENST00000390990 C4AP0C0L4 1744 aa-3.87□□□□□ -3.03
RNU6-239P-201ENST00000390990 C4BP0C0L5 1744 aa-3.87□□□□□ -3.03
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms