RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 A0A0G2JMZ2 1700 aa-2.82□□□□□ -2.86
SNORA40.4-201ENST00000390971 EHBP1L1Q8N3D4 1523 aa-2.82□□□□□ -2.86
SNORA40.4-201ENST00000390971 NAIPQ13075 1403 aa-2.82□□□□□ -2.86
SNORA40.4-201ENST00000390971 PHLPP1O60346 1717 aa-2.82□□□□□ -2.86
SNORA40.4-201ENST00000390971 MYH7P12883 1935 aa-2.83□□□□□ -2.86
SNORA40.4-201ENST00000390971 LOC105371267A0A1B0GV96 52 aa-2.84□□□□□ -2.86
SNORA40.4-201ENST00000390971 GNG7O60262 68 aa-2.84□□□□□ -2.86
SNORA40.4-201ENST00000390971 DEFB112Q30KQ8 113 aa-2.85□□□□□ -2.87
SNORA40.4-201ENST00000390971 ZNF436-AS1Q8NC38 126 aaPredicted RBP-2.85□□□□□ -2.87
SNORA40.4-201ENST00000390971 DNAH2Q9P225 4427 aa-2.85□□□□□ -2.87
SNORA40.4-201ENST00000390971 MBD5Q9P267 1494 aa-2.85□□□□□ -2.87
SNORA40.4-201ENST00000390971 LAMA3Q16787 3333 aa-2.86□□□□□ -2.87
SNORA40.4-201ENST00000390971 LCN9Q8WX39 176 aa-2.86□□□□□ -2.87
SNORA40.4-201ENST00000390971 XRN1Q8IZH2 1706 aaKnown RBP-2.86□□□□□ -2.87
SNORA40.4-201ENST00000390971 CCDC141Q6ZP82 1450 aa-2.86□□□□□ -2.87
SNORA40.4-201ENST00000390971 PAPPA2Q9BXP8 1791 aa-2.87□□□□□ -2.87
SNORA40.4-201ENST00000390971 TCHHQ07283 1943 aa-2.87□□□□□ -2.87
SNORA40.4-201ENST00000390971 WDR87Q6ZQQ6 2873 aa-2.87□□□□□ -2.87
SNORA40.4-201ENST00000390971 FAT3Q8TDW7 4589 aa-2.87□□□□□ -2.87
SNORA40.4-201ENST00000390971 AKAP13Q12802 2813 aa-2.88□□□□□ -2.87
SNORA40.4-201ENST00000390971 SPG11Q96JI7 2443 aa-2.89□□□□□ -2.87
SNORA40.4-201ENST00000390971 FGF7P21781 194 aa-2.89□□□□□ -2.87
SNORA40.4-201ENST00000390971 SPRR2FQ96RM1 72 aa-2.89□□□□□ -2.87
SNORA40.4-201ENST00000390971 ROBO1Q9Y6N7 1651 aa-2.89□□□□□ -2.87
SNORA40.4-201ENST00000390971 H1FX-AS1Q4G0G2 97 aa-2.9□□□□□ -2.87
SNORA40.4-201ENST00000390971 C9orf62Q8N4C0 152 aa-2.9□□□□□ -2.87
SNORA40.4-201ENST00000390971 CUBNO60494 3623 aa-2.91□□□□□ -2.87
SNORA40.4-201ENST00000390971 PKD1P98161 4303 aa-2.91□□□□□ -2.87
SNORA40.4-201ENST00000390971 SEC11AP67812 179 aa-2.91□□□□□ -2.88
SNORA40.4-201ENST00000390971 FOCADQ5VW36 1801 aa-2.91□□□□□ -2.88
SNORA40.4-201ENST00000390971 LOC100130705A0A1B0GUX0 176 aa-2.92□□□□□ -2.88
SNORA40.4-201ENST00000390971 A0A1B0GWA3 101 aa-2.92□□□□□ -2.88
SNORA40.4-201ENST00000390971 ADGRL2O95490 1459 aa-2.92□□□□□ -2.88
SNORA40.4-201ENST00000390971 TEX15Q9BXT5 2789 aa-2.93□□□□□ -2.88
SNORA40.4-201ENST00000390971 UBE2L5PA0A1B0GUS4 154 aa-2.93□□□□□ -2.88
SNORA40.4-201ENST00000390971 UBE2L3P68036 154 aaKnown RBP-2.93□□□□□ -2.88
SNORA40.4-201ENST00000390971 KTN1Q86UP2 1357 aaKnown RBP-2.93□□□□□ -2.88
SNORA40.4-201ENST00000390971 SCN7AQ01118 1682 aa-2.93□□□□□ -2.88
SNORA40.4-201ENST00000390971 ANKRD11Q6UB99 2663 aaPredicted RBP-2.93□□□□□ -2.88
SNORA40.4-201ENST00000390971 PLECQ15149 4684 aaKnown RBP-2.93□□□□□ -2.88
SNORA40.4-201ENST00000390971 NBASA2RRP1 2371 aa-2.94□□□□□ -2.88
SNORA40.4-201ENST00000390971 NKTRP30414 1462 aaKnown RBP-2.94□□□□□ -2.88
SNORA40.4-201ENST00000390971 QRICH2Q9H0J4 1663 aa-2.95□□□□□ -2.88
SNORA40.4-201ENST00000390971 DIP2CQ9Y2E4 1556 aa-2.95□□□□□ -2.88
SNORA40.4-201ENST00000390971 OOSP1A8MZH6 123 aa-2.95□□□□□ -2.88
SNORA40.4-201ENST00000390971 C9orf153Q5TBE3 101 aa-2.95□□□□□ -2.88
SNORA40.4-201ENST00000390971 DNHD1Q96M86 4753 aa-2.96□□□□□ -2.88
SNORA40.4-201ENST00000390971 GNG11P61952 73 aa-2.96□□□□□ -2.88
SNORA40.4-201ENST00000390971 PLEKHH2Q8IVE3 1493 aa-2.96□□□□□ -2.88
SNORA40.4-201ENST00000390971 AKAP9Q99996 3911 aa-2.97□□□□□ -2.88
SNORA40.4-201ENST00000390971 FAM223BA6NKX1 122 aa-2.97□□□□□ -2.88
SNORA40.4-201ENST00000390971 COX6CP09669 75 aa-2.97□□□□□ -2.88
SNORA40.4-201ENST00000390971 MANBALQ9NQG1 85 aa-2.97□□□□□ -2.88
SNORA40.4-201ENST00000390971 CRIPTQ9P021 101 aa-2.97□□□□□ -2.88
SNORA40.4-201ENST00000390971 NLRP1Q9C000 1473 aa-2.97□□□□□ -2.89
SNORA40.4-201ENST00000390971 ATP5EP56381 51 aaPredicted RBP-2.98□□□□□ -2.89
SNORA40.4-201ENST00000390971 NUP188Q5SRE5 1749 aa-2.99□□□□□ -2.89
SNORA40.4-201ENST00000390971 F6UZH7 168 aa-2.99□□□□□ -2.89
SNORA40.4-201ENST00000390971 TRAPPC2P0DI81 140 aa-2.99□□□□□ -2.89
SNORA40.4-201ENST00000390971 TRAPPC2BP0DI82 140 aa-2.99□□□□□ -2.89
SNORA40.4-201ENST00000390971 A2ML1A8K2U0 1454 aa-3□□□□□ -2.89
SNORA40.4-201ENST00000390971 UBE2D3P61077 147 aa-3□□□□□ -2.89
SNORA40.4-201ENST00000390971 UBE2D2P62837 147 aa-3□□□□□ -2.89
SNORA40.4-201ENST00000390971 Q0VG73 95 aa-3□□□□□ -2.89
SNORA40.4-201ENST00000390971 I3L3M4 83 aa-3.01□□□□□ -2.89
SNORA40.4-201ENST00000390971 CCDC58Q4VC31 144 aa-3.01□□□□□ -2.89
SNORA40.4-201ENST00000390971 LINC00846Q9NV44 126 aa-3.01□□□□□ -2.89
SNORA40.4-201ENST00000390971 COL12A1Q99715 3063 aa-3.01□□□□□ -2.89
SNORA40.4-201ENST00000390971 MRC2Q9UBG0 1479 aa-3.02□□□□□ -2.89
SNORA40.4-201ENST00000390971 SAA2P0DJI9 122 aaPredicted RBP-3.02□□□□□ -2.89
SNORA40.4-201ENST00000390971 KNL1Q8NG31 2342 aa-3.03□□□□□ -2.89
SNORA40.4-201ENST00000390971 A0A1B0GU69 56 aa-3.03□□□□□ -2.89
SNORA40.4-201ENST00000390971 AKAIN1P0CW23 69 aa-3.03□□□□□ -2.89
SNORA40.4-201ENST00000390971 SFTA2Q6UW10 78 aa-3.03□□□□□ -2.89
SNORA40.4-201ENST00000390971 CELSR3Q9NYQ7 3312 aa-3.03□□□□□ -2.89
SNORA40.4-201ENST00000390971 PRO1854Q9UHT4 67 aa-3.04□□□□□ -2.9
SNORA40.4-201ENST00000390971 NDUFA2O43678 99 aa-3.05□□□□□ -2.9
SNORA40.4-201ENST00000390971 DPH3P1Q9H4G8 78 aa-3.05□□□□□ -2.9
SNORA40.4-201ENST00000390971 ANK3Q12955 4377 aaKnown RBP-3.05□□□□□ -2.9
SNORA40.4-201ENST00000390971 TOP2BQ02880 1626 aa-3.06□□□□□ -2.9
SNORA40.4-201ENST00000390971 C12orf57Q99622 126 aa-3.06□□□□□ -2.9
SNORA40.4-201ENST00000390971 SCAPERQ9BY12 1400 aa-3.06□□□□□ -2.9
SNORA40.4-201ENST00000390971 UNC13AQ9UPW8 1703 aa-3.06□□□□□ -2.9
SNORA40.4-201ENST00000390971 MARF1Q9Y4F3 1742 aaKnown RBP-3.06□□□□□ -2.9
SNORA40.4-201ENST00000390971 EDC4Q6P2E9 1401 aaKnown RBP-3.08□□□□□ -2.9
SNORA40.4-201ENST00000390971 FAM24AA6NFZ4 105 aa-3.08□□□□□ -2.9
SNORA40.4-201ENST00000390971 PP6455Q8WZ26 134 aa-3.08□□□□□ -2.9
SNORA40.4-201ENST00000390971 PTPN23Q9H3S7 1636 aa-3.09□□□□□ -2.9
SNORA40.4-201ENST00000390971 ADAMTS12P58397 1594 aa-3.09□□□□□ -2.9
SNORA40.4-201ENST00000390971 DNAH9Q9NYC9 4486 aa-3.09□□□□□ -2.9
SNORA40.4-201ENST00000390971 VPS13BQ7Z7G8 4022 aa-3.09□□□□□ -2.9
SNORA40.4-201ENST00000390971 NAP1L6A6NFF2 107 aa-3.11□□□□□ -2.91
SNORA40.4-201ENST00000390971 SLIT1O75093 1534 aa-3.11□□□□□ -2.91
SNORA40.4-201ENST00000390971 C6orf201Q7Z4U5 140 aa-3.12□□□□□ -2.91
SNORA40.4-201ENST00000390971 H0YGG7 62 aa-3.13□□□□□ -2.91
SNORA40.4-201ENST00000390971 TSC22D3Q99576 134 aa-3.13□□□□□ -2.91
SNORA40.4-201ENST00000390971 REV3LO60673 3130 aa-3.13□□□□□ -2.91
SNORA40.4-201ENST00000390971 K7EP13 123 aa-3.14□□□□□ -2.91
SNORA40.4-201ENST00000390971 SNCAP37840 140 aa-3.14□□□□□ -2.91
SNORA40.4-201ENST00000390971 CUL7Q14999 1698 aa-3.14□□□□□ -2.91
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms