RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 MUC4Q99102 2169 aa3.46□□□□□ -1.86
TRAV35-201ENST00000390462 HEATR1Q9H583 2144 aaKnown RBP3.46□□□□□ -1.86
TRAV35-201ENST00000390462 LYSTQ99698 3801 aa3.45□□□□□ -1.86
TRAV35-201ENST00000390462 DNAH3Q8TD57 4116 aa3.45□□□□□ -1.86
TRAV35-201ENST00000390462 DYNC2H1Q8NCM8 4307 aaKnown RBP3.45□□□□□ -1.86
TRAV35-201ENST00000390462 HERC2O95714 4834 aa3.45□□□□□ -1.86
TRAV35-201ENST00000390462 INSL4Q14641 139 aa3.45□□□□□ -1.86
TRAV35-201ENST00000390462 OR10AG1Q8NH19 301 aa3.45□□□□□ -1.86
TRAV35-201ENST00000390462 SPACA4Q8TDM5 124 aa3.45□□□□□ -1.86
TRAV35-201ENST00000390462 TMEM141Q96I45 108 aa3.45□□□□□ -1.86
TRAV35-201ENST00000390462 UBR4Q5T4S7 5183 aa3.45□□□□□ -1.86
TRAV35-201ENST00000390462 IGKV2-24A0A0C4DH68 120 aa3.44□□□□□ -1.86
TRAV35-201ENST00000390462 CNBPP62633 177 aaKnown RBP3.44□□□□□ -1.86
TRAV35-201ENST00000390462 IGFL1Q6UW32 110 aa3.44□□□□□ -1.86
TRAV35-201ENST00000390462 TVP23CQ96ET8 276 aa3.44□□□□□ -1.86
TRAV35-201ENST00000390462 AP4S1Q9Y587 144 aa3.44□□□□□ -1.86
TRAV35-201ENST00000390462 WNK2Q9Y3S1 2297 aa3.44□□□□□ -1.86
TRAV35-201ENST00000390462 SACSQ9NZJ4 4579 aa3.43□□□□□ -1.86
TRAV35-201ENST00000390462 PIN1P1O15428 100 aa3.43□□□□□ -1.86
TRAV35-201ENST00000390462 POLR2JP52435 117 aaKnown RBP3.43□□□□□ -1.86
TRAV35-201ENST00000390462 S100A7L2Q5SY68 101 aa3.43□□□□□ -1.86
TRAV35-201ENST00000390462 SBSPONQ8IVN8 264 aa3.43□□□□□ -1.86
TRAV35-201ENST00000390462 C4orf3Q8WVX3 66 aa3.43□□□□□ -1.86
TRAV35-201ENST00000390462 PPDPFLQ8WWR9 84 aa3.43□□□□□ -1.86
TRAV35-201ENST00000390462 PIGBOS1A0A0B4J2F0 54 aa3.42□□□□□ -1.86
TRAV35-201ENST00000390462 SDHAF1A6NFY7 115 aa3.42□□□□□ -1.86
TRAV35-201ENST00000390462 LINC00032P0C843 101 aa3.42□□□□□ -1.86
TRAV35-201ENST00000390462 PRB4P10163 310 aaPredicted RBP3.42□□□□□ -1.86
TRAV35-201ENST00000390462 ATP5EP56381 51 aaPredicted RBP3.42□□□□□ -1.86
TRAV35-201ENST00000390462 SLC48A1Q6P1K1 146 aa3.42□□□□□ -1.86
TRAV35-201ENST00000390462 C5orf38Q86SI9 138 aa3.42□□□□□ -1.86
TRAV35-201ENST00000390462 VAMP8Q9BV40 100 aa3.42□□□□□ -1.86
TRAV35-201ENST00000390462 DPH3P1Q9H4G8 78 aa3.42□□□□□ -1.86
TRAV35-201ENST00000390462 TMEM106BQ9NUM4 274 aa3.42□□□□□ -1.86
TRAV35-201ENST00000390462 NOTCH3Q9UM47 2321 aa3.41□□□□□ -1.86
TRAV35-201ENST00000390462 PRB2P02812 416 aaPredicted RBP3.41□□□□□ -1.86
TRAV35-201ENST00000390462 SLC25A6P12236 298 aa3.41□□□□□ -1.86
TRAV35-201ENST00000390462 RBM3P98179 157 aaKnown RBP3.41□□□□□ -1.86
TRAV35-201ENST00000390462 LINC00052Q96N35 136 aa3.41□□□□□ -1.86
TRAV35-201ENST00000390462 TENM2Q9NT68 2774 aa3.41□□□□□ -1.86
TRAV35-201ENST00000390462 CSMD3Q7Z407 3707 aa3.41□□□□□ -1.86
TRAV35-201ENST00000390462 UBE2L5PA0A1B0GUS4 154 aa3.4□□□□□ -1.87
TRAV35-201ENST00000390462 RBAKDNA6NC62 111 aa3.4□□□□□ -1.87
TRAV35-201ENST00000390462 F8W1H4 67 aa3.4□□□□□ -1.87
TRAV35-201ENST00000390462 IGHV3-33P01772 117 aa3.4□□□□□ -1.87
TRAV35-201ENST00000390462 COX7CP15954 63 aa3.4□□□□□ -1.87
TRAV35-201ENST00000390462 CBLN1P23435 193 aa3.4□□□□□ -1.87
TRAV35-201ENST00000390462 UBE2G1P62253 170 aa3.4□□□□□ -1.87
TRAV35-201ENST00000390462 UBE2L3P68036 154 aaKnown RBP3.4□□□□□ -1.87
TRAV35-201ENST00000390462 RHOHQ15669 191 aa3.4□□□□□ -1.87
TRAV35-201ENST00000390462 RPL7L1Q6DKI1 246 aaKnown RBP3.4□□□□□ -1.87
TRAV35-201ENST00000390462 UNQ5815/PRO19632Q6UWF5 114 aa3.4□□□□□ -1.87
TRAV35-201ENST00000390462 BPESC1Q9GZL8 116 aa3.4□□□□□ -1.87
TRAV35-201ENST00000390462 LINC00312Q9Y6C7 94 aa3.4□□□□□ -1.87
TRAV35-201ENST00000390462 DNAH1Q9P2D7 4330 aa3.39□□□□□ -1.87
TRAV35-201ENST00000390462 H3BQ15 152 aa3.39□□□□□ -1.87
TRAV35-201ENST00000390462 H3BRN7 92 aa3.39□□□□□ -1.87
TRAV35-201ENST00000390462 SSSCA1O60232 199 aa3.39□□□□□ -1.87
TRAV35-201ENST00000390462 MT-ATP8P03928 68 aa3.39□□□□□ -1.87
TRAV35-201ENST00000390462 IL7P13232 177 aa3.39□□□□□ -1.87
TRAV35-201ENST00000390462 EFNA4P52798 201 aa3.39□□□□□ -1.87
TRAV35-201ENST00000390462 IQCJQ1A5X6 159 aa3.39□□□□□ -1.87
TRAV35-201ENST00000390462 LINC00167Q96N53 147 aa3.39□□□□□ -1.87
TRAV35-201ENST00000390462 ORMDL1Q9P0S3 153 aa3.39□□□□□ -1.87
TRAV35-201ENST00000390462 DNAH7Q8WXX0 4024 aa3.39□□□□□ -1.87
TRAV35-201ENST00000390462 DNAH9Q9NYC9 4486 aa3.38□□□□□ -1.87
TRAV35-201ENST00000390462 TRBV6-8A0A0A6YYG3 113 aa3.38□□□□□ -1.87
TRAV35-201ENST00000390462 A6NIN4 97 aa3.38□□□□□ -1.87
TRAV35-201ENST00000390462 SNCAP37840 140 aa3.38□□□□□ -1.87
TRAV35-201ENST00000390462 C9orf116Q5BN46 136 aaPredicted RBP3.38□□□□□ -1.87
TRAV35-201ENST00000390462 IGKV1D-17A0A075B6S4 117 aa3.37□□□□□ -1.87
TRAV35-201ENST00000390462 UQCRHLA0A096LP55 91 aa3.37□□□□□ -1.87
TRAV35-201ENST00000390462 TMEM30CPA0ZSE6 113 aa3.37□□□□□ -1.87
TRAV35-201ENST00000390462 STARD9Q9P2P6 4700 aa3.36□□□□□ -1.87
TRAV35-201ENST00000390462 TRGV4A0A0C4DH28 118 aa3.36□□□□□ -1.87
TRAV35-201ENST00000390462 IGKCP01834 107 aa3.36□□□□□ -1.87
TRAV35-201ENST00000390462 COMMD6Q7Z4G1 85 aa3.36□□□□□ -1.87
TRAV35-201ENST00000390462 H3BRM9 83 aa3.35□□□□□ -1.87
TRAV35-201ENST00000390462 IGLC1P0CG04 106 aa3.35□□□□□ -1.87
TRAV35-201ENST00000390462 KRTAP10-12P60413 245 aa3.35□□□□□ -1.87
TRAV35-201ENST00000390462 SPRNQ5BIV9 151 aa3.35□□□□□ -1.87
TRAV35-201ENST00000390462 PYY3Q5JQD4 70 aa3.35□□□□□ -1.87
TRAV35-201ENST00000390462 FAM74A1Q5RGS3 127 aa3.35□□□□□ -1.87
TRAV35-201ENST00000390462 CSAG1Q6PB30 78 aa3.35□□□□□ -1.87
TRAV35-201ENST00000390462 PRO1933Q9H354 126 aa3.35□□□□□ -1.87
TRAV35-201ENST00000390462 ABCA13Q86UQ4 5058 aa3.35□□□□□ -1.87
TRAV35-201ENST00000390462 TFF1P04155 84 aa3.34□□□□□ -1.87
TRAV35-201ENST00000390462 KRTAP10-3P60369 221 aa3.34□□□□□ -1.87
TRAV35-201ENST00000390462 LYPD5Q6UWN5 251 aa3.34□□□□□ -1.87
TRAV35-201ENST00000390462 HECTD4Q9Y4D8 3996 aa3.34□□□□□ -1.87
TRAV35-201ENST00000390462 FRAS1Q86XX4 4008 aa3.34□□□□□ -1.87
TRAV35-201ENST00000390462 TRBV10-3A0A0K0K1G6 114 aa3.33□□□□□ -1.88
TRAV35-201ENST00000390462 RNASE2P10153 161 aaKnown RBP3.33□□□□□ -1.88
TRAV35-201ENST00000390462 Q0VG73 95 aa3.33□□□□□ -1.88
TRAV35-201ENST00000390462 C10orf55Q5SWW7 151 aa3.33□□□□□ -1.88
TRAV35-201ENST00000390462 LCE3CQ5T5A8 94 aa3.33□□□□□ -1.88
TRAV35-201ENST00000390462 LINC00304Q8N9R0 145 aa3.33□□□□□ -1.88
TRAV35-201ENST00000390462 SPTSSBQ8NFR3 76 aa3.33□□□□□ -1.88
TRAV35-201ENST00000390462 ATG5Q9H1Y0 275 aa3.33□□□□□ -1.88
TRAV35-201ENST00000390462 C22orf24Q9Y442 160 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms