RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 LYPD5Q6UWN5 251 aa10.66□□□□□ -0.7
LRRK1-201ENST00000388948 NDUFV3P56181 108 aaKnown RBP10.65□□□□□ -0.7
LRRK1-201ENST00000388948 IGLV4-60A0A075B6I1 120 aa10.65□□□□□ -0.7
LRRK1-201ENST00000388948 CRIP2P52943 208 aaPredicted RBP10.65□□□□□ -0.7
LRRK1-201ENST00000388948 RNASE8Q8TDE3 154 aaKnown RBP10.65□□□□□ -0.7
LRRK1-201ENST00000388948 ACANP16112 2415 aa10.65□□□□□ -0.7
LRRK1-201ENST00000388948 ESRGQ1W209 222 aa10.63□□□□□ -0.71
LRRK1-201ENST00000388948 RETNLBQ9BQ08 111 aa10.63□□□□□ -0.71
LRRK1-201ENST00000388948 MPLKIPQ8TAP9 179 aa10.63□□□□□ -0.71
LRRK1-201ENST00000388948 TRBV10-3A0A0K0K1G6 114 aa10.63□□□□□ -0.71
LRRK1-201ENST00000388948 PRYO14603 147 aa10.63□□□□□ -0.71
LRRK1-201ENST00000388948 C2orf48Q96LS8 159 aa10.62□□□□□ -0.71
LRRK1-201ENST00000388948 MRPL55Q7Z7F7 128 aaKnown RBP10.62□□□□□ -0.71
LRRK1-201ENST00000388948 IGHV6-1A0A0B4J1U7 121 aa10.62□□□□□ -0.71
LRRK1-201ENST00000388948 LINC00242Q5T6M2 205 aa10.62□□□□□ -0.71
LRRK1-201ENST00000388948 POM121L12Q8N7R1 296 aa10.61□□□□□ -0.71
LRRK1-201ENST00000388948 GAS8-AS1O95177 125 aa10.61□□□□□ -0.71
LRRK1-201ENST00000388948 NDUFC2-KCTD14E9PQ53 114 aa10.61□□□□□ -0.71
LRRK1-201ENST00000388948 FAM229AH3BQW9 127 aa10.6□□□□□ -0.71
LRRK1-201ENST00000388948 J3KT08 172 aa10.6□□□□□ -0.71
LRRK1-201ENST00000388948 FAM19A3Q7Z5A8 133 aa10.6□□□□□ -0.71
LRRK1-201ENST00000388948 LINC00694P0DN24 101 aa10.59□□□□□ -0.71
LRRK1-201ENST00000388948 Q9BRP9 147 aa10.59□□□□□ -0.71
LRRK1-201ENST00000388948 KRTAP24-1Q3LI83 254 aa10.59□□□□□ -0.71
LRRK1-201ENST00000388948 PRR3P79522 188 aaKnown RBP10.59□□□□□ -0.71
LRRK1-201ENST00000388948 ZNF580Q9UK33 172 aa10.58□□□□□ -0.72
LRRK1-201ENST00000388948 XGP55808 180 aa10.58□□□□□ -0.72
LRRK1-201ENST00000388948 PRR4Q16378 134 aa10.58□□□□□ -0.72
LRRK1-201ENST00000388948 BRK1Q8WUW1 75 aa10.58□□□□□ -0.72
LRRK1-201ENST00000388948 C10orf142B7Z368 130 aa10.58□□□□□ -0.72
LRRK1-201ENST00000388948 FAM30AQ9NZY2 134 aa10.58□□□□□ -0.72
LRRK1-201ENST00000388948 TP73-AS1Q9UF72 201 aa10.57□□□□□ -0.72
LRRK1-201ENST00000388948 LIMD2Q9BT23 127 aa10.55□□□□□ -0.72
LRRK1-201ENST00000388948 SMIM1B2RUZ4 78 aa10.55□□□□□ -0.72
LRRK1-201ENST00000388948 CELA1Q9UNI1 258 aa10.55□□□□□ -0.72
LRRK1-201ENST00000388948 C16orf90A8MZG2 172 aa10.55□□□□□ -0.72
LRRK1-201ENST00000388948 F8WDY8 70 aa10.54□□□□□ -0.72
LRRK1-201ENST00000388948 Q6JHZ5 121 aa10.54□□□□□ -0.72
LRRK1-201ENST00000388948 MRPS12O15235 138 aaKnown RBP10.54□□□□□ -0.72
LRRK1-201ENST00000388948 CNFNQ9BYD5 112 aa10.53□□□□□ -0.72
LRRK1-201ENST00000388948 IGIPA6NJ69 53 aa10.53□□□□□ -0.72
LRRK1-201ENST00000388948 SBSPONQ8IVN8 264 aa10.53□□□□□ -0.72
LRRK1-201ENST00000388948 PRLHP81277 87 aa10.53□□□□□ -0.72
LRRK1-201ENST00000388948 SNURFQ9Y675 71 aa10.53□□□□□ -0.72
LRRK1-201ENST00000388948 A0A1B0GUV1 79 aa10.52□□□□□ -0.72
LRRK1-201ENST00000388948 NTM-AS1Q6ZSK4 140 aa10.52□□□□□ -0.73
LRRK1-201ENST00000388948 SERP2Q8N6R1 65 aa10.51□□□□□ -0.73
LRRK1-201ENST00000388948 Q6ZRU5 148 aa10.51□□□□□ -0.73
LRRK1-201ENST00000388948 Q6ZSN1 163 aa10.51□□□□□ -0.73
LRRK1-201ENST00000388948 BEAN1Q3B7T3 259 aa10.5□□□□□ -0.73
LRRK1-201ENST00000388948 FLNBO75369 2602 aaKnown RBP10.5□□□□□ -0.73
LRRK1-201ENST00000388948 J3QL48 77 aa10.49□□□□□ -0.73
LRRK1-201ENST00000388948 Q8N814 137 aa10.49□□□□□ -0.73
LRRK1-201ENST00000388948 WWC2-AS2Q96NR7 200 aa10.49□□□□□ -0.73
LRRK1-201ENST00000388948 CSDC2Q9Y534 153 aaKnown RBP10.49□□□□□ -0.73
LRRK1-201ENST00000388948 EPG5Q9HCE0 2579 aa10.48□□□□□ -0.73
LRRK1-201ENST00000388948 SPINK1P00995 79 aa10.48□□□□□ -0.73
LRRK1-201ENST00000388948 UQCRQO14949 82 aa10.48□□□□□ -0.73
LRRK1-201ENST00000388948 Q6Q795 121 aa10.48□□□□□ -0.73
LRRK1-201ENST00000388948 A0A087WSZ3 146 aa10.47□□□□□ -0.73
LRRK1-201ENST00000388948 Q8N2B8 174 aa10.47□□□□□ -0.73
LRRK1-201ENST00000388948 MT-ATP8P03928 68 aa10.47□□□□□ -0.73
LRRK1-201ENST00000388948 SPACA4Q8TDM5 124 aa10.47□□□□□ -0.73
LRRK1-201ENST00000388948 LINC01547P58512 204 aaPredicted RBP10.47□□□□□ -0.73
LRRK1-201ENST00000388948 DEFB116Q30KQ4 102 aa10.46□□□□□ -0.74
LRRK1-201ENST00000388948 A6NED7 52 aa10.45□□□□□ -0.74
LRRK1-201ENST00000388948 C22orf24Q9Y442 160 aa10.45□□□□□ -0.74
LRRK1-201ENST00000388948 LINC00208Q96KT6 92 aa10.45□□□□□ -0.74
LRRK1-201ENST00000388948 V9GYY9 64 aa10.45□□□□□ -0.74
LRRK1-201ENST00000388948 NDUFC1O43677 76 aa10.44□□□□□ -0.74
LRRK1-201ENST00000388948 USP24Q9UPU5 2620 aa10.44□□□□□ -0.74
LRRK1-201ENST00000388948 PTPRBP23467 1997 aa10.43□□□□□ -0.74
LRRK1-201ENST00000388948 SMCR5Q8TEV8 140 aa10.43□□□□□ -0.74
LRRK1-201ENST00000388948 TRBV7-6A0A0J9YX20 115 aa10.42□□□□□ -0.74
LRRK1-201ENST00000388948 COL27A1Q8IZC6 1860 aaPredicted RBP10.41□□□□□ -0.74
LRRK1-201ENST00000388948 LINC00315P59091 139 aa10.41□□□□□ -0.74
LRRK1-201ENST00000388948 A0A087WYN8 130 aa10.4□□□□□ -0.74
LRRK1-201ENST00000388948 LINC00575Q6W349 94 aa10.4□□□□□ -0.74
LRRK1-201ENST00000388948 A8MTW9 85 aa10.4□□□□□ -0.74
LRRK1-201ENST00000388948 RTL8CO15255 209 aa10.4□□□□□ -0.74
LRRK1-201ENST00000388948 FAM240AA0A1B0GVK7 77 aa10.4□□□□□ -0.75
LRRK1-201ENST00000388948 AMELXQ99217 191 aa10.39□□□□□ -0.75
LRRK1-201ENST00000388948 MOBPQ13875 183 aa10.39□□□□□ -0.75
LRRK1-201ENST00000388948 PCOTHQ58A44 107 aa10.39□□□□□ -0.75
LRRK1-201ENST00000388948 NBDYA0A0U1RRE5 68 aa10.38□□□□□ -0.75
LRRK1-201ENST00000388948 ATP5EP56381 51 aaPredicted RBP10.38□□□□□ -0.75
LRRK1-201ENST00000388948 IGKV2D-30A0A075B6S6 120 aa10.38□□□□□ -0.75
LRRK1-201ENST00000388948 IGKV2-30P06310 120 aa10.38□□□□□ -0.75
LRRK1-201ENST00000388948 C2orf91Q6ZV80 131 aa10.37□□□□□ -0.75
LRRK1-201ENST00000388948 PLA2G1BP04054 148 aaKnown RBP10.36□□□□□ -0.75
LRRK1-201ENST00000388948 LINC01561Q8N1V8 128 aa10.36□□□□□ -0.75
LRRK1-201ENST00000388948 ADAMTSL4-AS1Q5T5F5 129 aa10.35□□□□□ -0.75
LRRK1-201ENST00000388948 TYMSOSQ8TAI1 123 aa10.35□□□□□ -0.75
LRRK1-201ENST00000388948 TSPEAR-AS2P59090 65 aa10.34□□□□□ -0.75
LRRK1-201ENST00000388948 C11orf72Q8NBR9 251 aa10.34□□□□□ -0.75
LRRK1-201ENST00000388948 HCG22E2RYF7 251 aa10.33□□□□□ -0.76
LRRK1-201ENST00000388948 COL4A2P08572 1712 aa10.33□□□□□ -0.76
LRRK1-201ENST00000388948 CHTF8P0CG12 524 aa10.33□□□□□ -0.76
LRRK1-201ENST00000388948 IMUPQ9GZP8 106 aa10.33□□□□□ -0.76
LRRK1-201ENST00000388948 Q6ZRP5 223 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms