RNA–Protein interactions for RNA: ENST00000383018.7

SNRNP25-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SNRNP25, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-202ENST00000383018 SMIM1B2RUZ4 78 aa13.13□□□□□ -0.31
SNRNP25-202ENST00000383018 RPL18AQ02543 176 aaKnown RBP13.13□□□□□ -0.31
SNRNP25-202ENST00000383018 COLCA2A8K830 154 aa13.12□□□□□ -0.31
SNRNP25-202ENST00000383018 C9orf116Q5BN46 136 aaPredicted RBP13.12□□□□□ -0.31
SNRNP25-202ENST00000383018 LINC00469Q8N7U9 141 aa13.12□□□□□ -0.31
SNRNP25-202ENST00000383018 KRTAP29-1A8MX34 341 aaPredicted RBP13.11□□□□□ -0.31
SNRNP25-202ENST00000383018 TRGC2P03986 189 aa13.11□□□□□ -0.31
SNRNP25-202ENST00000383018 C7orf33Q8WU49 177 aa13.11□□□□□ -0.31
SNRNP25-202ENST00000383018 CHCHD1Q96BP2 118 aaKnown RBP13.11□□□□□ -0.31
SNRNP25-202ENST00000383018 TOMM7Q9P0U1 55 aa13.11□□□□□ -0.31
SNRNP25-202ENST00000383018 HERC1Q15751 4861 aa13.11□□□□□ -0.31
SNRNP25-202ENST00000383018 IGLC3P0DOY3 106 aa13.1□□□□□ -0.31
SNRNP25-202ENST00000383018 C6orf226Q5I0X4 101 aa13.1□□□□□ -0.31
SNRNP25-202ENST00000383018 PACRGQ96M98 296 aaPredicted RBP13.1□□□□□ -0.31
SNRNP25-202ENST00000383018 PRSS2P07478 247 aa13.09□□□□□ -0.31
SNRNP25-202ENST00000383018 ATP5LO75964 103 aa13.08□□□□□ -0.32
SNRNP25-202ENST00000383018 KRTAP7-1Q8IUC3 87 aa13.08□□□□□ -0.32
SNRNP25-202ENST00000383018 NDUFC2-KCTD14E9PQ53 114 aa13.07□□□□□ -0.32
SNRNP25-202ENST00000383018 CKS1BP61024 79 aa13.07□□□□□ -0.32
SNRNP25-202ENST00000383018 PRR3P79522 188 aaKnown RBP13.06□□□□□ -0.32
SNRNP25-202ENST00000383018 FAM168BA1KXE4 195 aa13.05□□□□□ -0.32
SNRNP25-202ENST00000383018 SPINK8P0C7L1 97 aa13.05□□□□□ -0.32
SNRNP25-202ENST00000383018 ZNF22P17026 224 aaPredicted RBP13.05□□□□□ -0.32
SNRNP25-202ENST00000383018 NDUFA6P56556 154 aa13.05□□□□□ -0.32
SNRNP25-202ENST00000383018 LINC00310P59036 64 aa13.05□□□□□ -0.32
SNRNP25-202ENST00000383018 GAGE2EQ4V326 116 aa13.05□□□□□ -0.32
SNRNP25-202ENST00000383018 GAGE2DQ9UEU5 116 aa13.05□□□□□ -0.32
SNRNP25-202ENST00000383018 F8VRH5 84 aa13.04□□□□□ -0.32
SNRNP25-202ENST00000383018 C9orf129Q5T035 196 aaKnown RBP13.04□□□□□ -0.32
SNRNP25-202ENST00000383018 COX7B2Q8TF08 81 aa13.04□□□□□ -0.32
SNRNP25-202ENST00000383018 IGLV5-39A0A0G2JS06 123 aa13.03□□□□□ -0.32
SNRNP25-202ENST00000383018 CXCL5P42830 114 aa13.03□□□□□ -0.32
SNRNP25-202ENST00000383018 PHF5AQ7RTV0 110 aaKnown RBP13.03□□□□□ -0.32
SNRNP25-202ENST00000383018 BAGE3Q86Y29 109 aa13.03□□□□□ -0.32
SNRNP25-202ENST00000383018 OXTP01178 125 aa13.02□□□□□ -0.33
SNRNP25-202ENST00000383018 C11orf86A6NJI1 115 aa13.01□□□□□ -0.33
SNRNP25-202ENST00000383018 H3BRM9 83 aa13.01□□□□□ -0.33
SNRNP25-202ENST00000383018 FAM19A2Q8N3H0 131 aa13.01□□□□□ -0.33
SNRNP25-202ENST00000383018 IFI27L1Q96BM0 104 aa13.01□□□□□ -0.33
SNRNP25-202ENST00000383018 TRAV12-1A0A0B4J245 112 aa13□□□□□ -0.33
SNRNP25-202ENST00000383018 NUPR1O60356 82 aa12.99□□□□□ -0.33
SNRNP25-202ENST00000383018 HSBP1O75506 76 aa12.99□□□□□ -0.33
SNRNP25-202ENST00000383018 SCO1O75880 301 aa12.99□□□□□ -0.33
SNRNP25-202ENST00000383018 SRSF9Q13242 221 aaKnown RBP eCLIP12.99□□□□□ -0.33
SNRNP25-202ENST00000383018 KRTAP11-1Q8IUC1 163 aa12.99□□□□□ -0.33
SNRNP25-202ENST00000383018 SERF1AO75920 110 aa12.98□□□□□ -0.33
SNRNP25-202ENST00000383018 J3QL48 77 aa12.97□□□□□ -0.33
SNRNP25-202ENST00000383018 PSORS1C2Q9UIG4 136 aa12.97□□□□□ -0.33
SNRNP25-202ENST00000383018 CHTOPQ9Y3Y2 248 aaKnown RBP12.97□□□□□ -0.33
SNRNP25-202ENST00000383018 FAM19A5Q7Z5A7 132 aaPredicted RBP12.96□□□□□ -0.33
SNRNP25-202ENST00000383018 SERTAD4-AS1Q5TG53 156 aa12.94□□□□□ -0.34
SNRNP25-202ENST00000383018 XAGE1AQ9HD64 81 aa12.94□□□□□ -0.34
SNRNP25-202ENST00000383018 TMEM170BQ5T4T1 132 aa12.93□□□□□ -0.34
SNRNP25-202ENST00000383018 MT1HL1P0DM35 61 aa12.92□□□□□ -0.34
SNRNP25-202ENST00000383018 ODF1Q14990 250 aa12.92□□□□□ -0.34
SNRNP25-202ENST00000383018 SPINK6Q6UWN8 80 aa12.92□□□□□ -0.34
SNRNP25-202ENST00000383018 TMEM223A0PJW6 202 aa12.91□□□□□ -0.34
SNRNP25-202ENST00000383018 M0QXV9 152 aa12.91□□□□□ -0.34
SNRNP25-202ENST00000383018 TNXBP22105 4242 aa12.9□□□□□ -0.34
SNRNP25-202ENST00000383018 LEPROTL1O95214 131 aa12.9□□□□□ -0.34
SNRNP25-202ENST00000383018 ZNF625Q96I27 306 aaPredicted RBP12.88□□□□□ -0.35
SNRNP25-202ENST00000383018 PLA2G2DQ9UNK4 145 aa12.88□□□□□ -0.35
SNRNP25-202ENST00000383018 C22orf24Q9Y442 160 aa12.88□□□□□ -0.35
SNRNP25-202ENST00000383018 HIST1H2BKO60814 126 aa12.87□□□□□ -0.35
SNRNP25-202ENST00000383018 HIST1H2BJP06899 126 aa12.87□□□□□ -0.35
SNRNP25-202ENST00000383018 HIST1H2BOP23527 126 aa12.87□□□□□ -0.35
SNRNP25-202ENST00000383018 HIST1H2BBP33778 126 aa12.87□□□□□ -0.35
SNRNP25-202ENST00000383018 HIST1H2BDP58876 126 aa12.87□□□□□ -0.35
SNRNP25-202ENST00000383018 HIST1H2BCP62807 126 aa12.87□□□□□ -0.35
SNRNP25-202ENST00000383018 HIST2H2BEQ16778 126 aa12.87□□□□□ -0.35
SNRNP25-202ENST00000383018 C1orf137Q5JT78 98 aa12.87□□□□□ -0.35
SNRNP25-202ENST00000383018 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.87□□□□□ -0.35
SNRNP25-202ENST00000383018 HIST1H2BHQ93079 126 aa12.87□□□□□ -0.35
SNRNP25-202ENST00000383018 HIST1H2BNQ99877 126 aa12.87□□□□□ -0.35
SNRNP25-202ENST00000383018 HIST1H2BMQ99879 126 aa12.87□□□□□ -0.35
SNRNP25-202ENST00000383018 TP73-AS1Q9UF72 201 aa12.85□□□□□ -0.35
SNRNP25-202ENST00000383018 IGLV7-43P04211 117 aa12.84□□□□□ -0.35
SNRNP25-202ENST00000383018 FABP4P15090 132 aa12.84□□□□□ -0.35
SNRNP25-202ENST00000383018 LINC01600Q96MT4 127 aa12.84□□□□□ -0.35
SNRNP25-202ENST00000383018 HSPB8Q9UJY1 196 aa12.84□□□□□ -0.35
SNRNP25-202ENST00000383018 ERG28Q9UKR5 140 aa12.84□□□□□ -0.35
SNRNP25-202ENST00000383018 IGLV5-37A0A075B6J1 123 aa12.82□□□□□ -0.36
SNRNP25-202ENST00000383018 PFN2P35080 140 aa12.82□□□□□ -0.36
SNRNP25-202ENST00000383018 COX17Q14061 63 aa12.82□□□□□ -0.36
SNRNP25-202ENST00000383018 SFTA2Q6UW10 78 aa12.82□□□□□ -0.36
SNRNP25-202ENST00000383018 H0Y8G0 127 aa12.81□□□□□ -0.36
SNRNP25-202ENST00000383018 UBE2BP63146 152 aa12.81□□□□□ -0.36
SNRNP25-202ENST00000383018 LBHQ53QV2 105 aaPredicted RBP12.8□□□□□ -0.36
SNRNP25-202ENST00000383018 MRPL55Q7Z7F7 128 aaKnown RBP12.8□□□□□ -0.36
SNRNP25-202ENST00000383018 SND1-IT1Q9HBX3 110 aa12.79□□□□□ -0.36
SNRNP25-202ENST00000383018 KRTAP10-8P60410 259 aa12.78□□□□□ -0.36
SNRNP25-202ENST00000383018 LINC00167Q96N53 147 aa12.78□□□□□ -0.36
SNRNP25-202ENST00000383018 REG3GQ6UW15 175 aa12.77□□□□□ -0.37
SNRNP25-202ENST00000383018 PLNP26678 52 aa12.76□□□□□ -0.37
SNRNP25-202ENST00000383018 COA6Q5JTJ3 125 aaKnown RBP12.76□□□□□ -0.37
SNRNP25-202ENST00000383018 Q8NDZ9 215 aa12.76□□□□□ -0.37
SNRNP25-202ENST00000383018 PMCHL2Q9BQD1 86 aa12.76□□□□□ -0.37
SNRNP25-202ENST00000383018 DPM2O94777 84 aa12.75□□□□□ -0.37
SNRNP25-202ENST00000383018 VPREB1P12018 145 aa12.75□□□□□ -0.37
SNRNP25-202ENST00000383018 TSPEAR-AS2P59090 65 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms