RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 CHCHD1Q96BP2 118 aaKnown RBP11.83□□□□□ -0.52
TMEM88B-201ENST00000378821 RNF151Q2KHN1 245 aa11.82□□□□□ -0.52
TMEM88B-201ENST00000378821 LINC00469Q8N7U9 141 aa11.82□□□□□ -0.52
TMEM88B-201ENST00000378821 IGLV5-45A0A087WSX0 123 aa11.81□□□□□ -0.52
TMEM88B-201ENST00000378821 PTTG1IPP53801 180 aa11.81□□□□□ -0.52
TMEM88B-201ENST00000378821 PRR3P79522 188 aaKnown RBP11.81□□□□□ -0.52
TMEM88B-201ENST00000378821 GAGE2BQ13066 116 aa11.81□□□□□ -0.52
TMEM88B-201ENST00000378821 C6orf48Q9UBA6 75 aa11.81□□□□□ -0.52
TMEM88B-201ENST00000378821 C2orf82Q6UX34 121 aa11.8□□□□□ -0.52
TMEM88B-201ENST00000378821 PACRGQ96M98 296 aaPredicted RBP11.8□□□□□ -0.52
TMEM88B-201ENST00000378821 TOMM7Q9P0U1 55 aa11.8□□□□□ -0.52
TMEM88B-201ENST00000378821 ATP5LO75964 103 aa11.79□□□□□ -0.52
TMEM88B-201ENST00000378821 NDUFA6P56556 154 aa11.79□□□□□ -0.52
TMEM88B-201ENST00000378821 RPL18AQ02543 176 aaKnown RBP11.79□□□□□ -0.52
TMEM88B-201ENST00000378821 BAGE3Q86Y29 109 aa11.79□□□□□ -0.52
TMEM88B-201ENST00000378821 PLA2G2DQ9UNK4 145 aa11.79□□□□□ -0.52
TMEM88B-201ENST00000378821 SMIM1B2RUZ4 78 aa11.78□□□□□ -0.52
TMEM88B-201ENST00000378821 PRSS2P07478 247 aa11.78□□□□□ -0.52
TMEM88B-201ENST00000378821 IGLC3P0DOY3 106 aa11.78□□□□□ -0.52
TMEM88B-201ENST00000378821 Q8IZM0 81 aa11.78□□□□□ -0.52
TMEM88B-201ENST00000378821 LINC00310P59036 64 aa11.77□□□□□ -0.53
TMEM88B-201ENST00000378821 TRBV30A0A0K0K1B3 111 aa11.76□□□□□ -0.53
TMEM88B-201ENST00000378821 HSBP1O75506 76 aa11.76□□□□□ -0.53
TMEM88B-201ENST00000378821 FAM19A2Q8N3H0 131 aa11.76□□□□□ -0.53
TMEM88B-201ENST00000378821 SERF1AO75920 110 aa11.75□□□□□ -0.53
TMEM88B-201ENST00000378821 SPINK8P0C7L1 97 aa11.75□□□□□ -0.53
TMEM88B-201ENST00000378821 TLX1NBP0CAT3 122 aa11.75□□□□□ -0.53
TMEM88B-201ENST00000378821 LINC01600Q96MT4 127 aa11.75□□□□□ -0.53
TMEM88B-201ENST00000378821 SRSF9Q13242 221 aaKnown RBP eCLIP11.74□□□□□ -0.53
TMEM88B-201ENST00000378821 C6orf226Q5I0X4 101 aa11.74□□□□□ -0.53
TMEM88B-201ENST00000378821 Q6ZRP5 223 aa11.74□□□□□ -0.53
TMEM88B-201ENST00000378821 IFI27L1Q96BM0 104 aa11.74□□□□□ -0.53
TMEM88B-201ENST00000378821 ZNF22P17026 224 aaPredicted RBP11.73□□□□□ -0.53
TMEM88B-201ENST00000378821 CKS1BP61024 79 aa11.73□□□□□ -0.53
TMEM88B-201ENST00000378821 C9orf116Q5BN46 136 aaPredicted RBP11.73□□□□□ -0.53
TMEM88B-201ENST00000378821 A0A1W2PNN7 141 aa11.72□□□□□ -0.53
TMEM88B-201ENST00000378821 H3BRM9 83 aa11.72□□□□□ -0.53
TMEM88B-201ENST00000378821 SPINK6Q6UWN8 80 aa11.72□□□□□ -0.53
TMEM88B-201ENST00000378821 COX7B2Q8TF08 81 aa11.72□□□□□ -0.53
TMEM88B-201ENST00000378821 C11orf86A6NJI1 115 aa11.71□□□□□ -0.53
TMEM88B-201ENST00000378821 NUPR1O60356 82 aa11.71□□□□□ -0.53
TMEM88B-201ENST00000378821 F8VRH5 84 aa11.7□□□□□ -0.54
TMEM88B-201ENST00000378821 CXCL5P42830 114 aa11.7□□□□□ -0.54
TMEM88B-201ENST00000378821 GAGE2EQ4V326 116 aa11.7□□□□□ -0.54
TMEM88B-201ENST00000378821 GAGE2DQ9UEU5 116 aa11.7□□□□□ -0.54
TMEM88B-201ENST00000378821 CHTOPQ9Y3Y2 248 aaKnown RBP11.7□□□□□ -0.54
TMEM88B-201ENST00000378821 TRAV12-1A0A0B4J245 112 aa11.69□□□□□ -0.54
TMEM88B-201ENST00000378821 NDUFC2-KCTD14E9PQ53 114 aa11.69□□□□□ -0.54
TMEM88B-201ENST00000378821 IGLV5-39A0A0G2JS06 123 aa11.68□□□□□ -0.54
TMEM88B-201ENST00000378821 TNXBP22105 4242 aa11.68□□□□□ -0.54
TMEM88B-201ENST00000378821 FAM168BA1KXE4 195 aa11.67□□□□□ -0.54
TMEM88B-201ENST00000378821 HIST1H2BKO60814 126 aa11.66□□□□□ -0.54
TMEM88B-201ENST00000378821 LEPROTL1O95214 131 aa11.66□□□□□ -0.54
TMEM88B-201ENST00000378821 HIST1H2BJP06899 126 aa11.66□□□□□ -0.54
TMEM88B-201ENST00000378821 HIST1H2BOP23527 126 aa11.66□□□□□ -0.54
TMEM88B-201ENST00000378821 HIST1H2BBP33778 126 aa11.66□□□□□ -0.54
TMEM88B-201ENST00000378821 HIST1H2BDP58876 126 aa11.66□□□□□ -0.54
TMEM88B-201ENST00000378821 KRTAP10-8P60410 259 aa11.66□□□□□ -0.54
TMEM88B-201ENST00000378821 HIST1H2BCP62807 126 aa11.66□□□□□ -0.54
TMEM88B-201ENST00000378821 HIST2H2BEQ16778 126 aa11.66□□□□□ -0.54
TMEM88B-201ENST00000378821 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.66□□□□□ -0.54
TMEM88B-201ENST00000378821 TMEM170BQ5T4T1 132 aa11.66□□□□□ -0.54
TMEM88B-201ENST00000378821 HIST1H2BHQ93079 126 aa11.66□□□□□ -0.54
TMEM88B-201ENST00000378821 HIST1H2BNQ99877 126 aa11.66□□□□□ -0.54
TMEM88B-201ENST00000378821 HIST1H2BMQ99879 126 aa11.66□□□□□ -0.54
TMEM88B-201ENST00000378821 C9orf129Q5T035 196 aaKnown RBP11.65□□□□□ -0.54
TMEM88B-201ENST00000378821 UBR4Q5T4S7 5183 aa11.64□□□□□ -0.55
TMEM88B-201ENST00000378821 REG3GQ6UW15 175 aa11.64□□□□□ -0.55
TMEM88B-201ENST00000378821 FAM19A5Q7Z5A7 132 aaPredicted RBP11.64□□□□□ -0.55
TMEM88B-201ENST00000378821 H0Y8G0 127 aa11.63□□□□□ -0.55
TMEM88B-201ENST00000378821 PHF5AQ7RTV0 110 aaKnown RBP11.63□□□□□ -0.55
TMEM88B-201ENST00000378821 KRTAP7-1Q8IUC3 87 aa11.63□□□□□ -0.55
TMEM88B-201ENST00000378821 FABP4P15090 132 aa11.62□□□□□ -0.55
TMEM88B-201ENST00000378821 ODF1Q14990 250 aa11.62□□□□□ -0.55
TMEM88B-201ENST00000378821 PSORS1C2Q9UIG4 136 aa11.61□□□□□ -0.55
TMEM88B-201ENST00000378821 HSPB8Q9UJY1 196 aa11.61□□□□□ -0.55
TMEM88B-201ENST00000378821 TMEM223A0PJW6 202 aa11.6□□□□□ -0.55
TMEM88B-201ENST00000378821 ATP6V1G1O75348 118 aa11.6□□□□□ -0.55
TMEM88B-201ENST00000378821 XAGE1AQ9HD64 81 aa11.6□□□□□ -0.55
TMEM88B-201ENST00000378821 S100A1P23297 94 aa11.58□□□□□ -0.56
TMEM88B-201ENST00000378821 M0QXV9 152 aa11.57□□□□□ -0.56
TMEM88B-201ENST00000378821 KRTAP11-1Q8IUC1 163 aa11.55□□□□□ -0.56
TMEM88B-201ENST00000378821 ZNF625Q96I27 306 aaPredicted RBP11.55□□□□□ -0.56
TMEM88B-201ENST00000378821 PMCHL2Q9BQD1 86 aa11.55□□□□□ -0.56
TMEM88B-201ENST00000378821 ERG28Q9UKR5 140 aa11.54□□□□□ -0.56
TMEM88B-201ENST00000378821 PLNP26678 52 aa11.53□□□□□ -0.56
TMEM88B-201ENST00000378821 PFN2P35080 140 aa11.53□□□□□ -0.56
TMEM88B-201ENST00000378821 C1orf137Q5JT78 98 aa11.53□□□□□ -0.56
TMEM88B-201ENST00000378821 MAP1LC3CQ9BXW4 147 aa11.53□□□□□ -0.56
TMEM88B-201ENST00000378821 COA6Q5JTJ3 125 aaKnown RBP11.52□□□□□ -0.57
TMEM88B-201ENST00000378821 SFTA2Q6UW10 78 aa11.52□□□□□ -0.57
TMEM88B-201ENST00000378821 DPM2O94777 84 aa11.51□□□□□ -0.57
TMEM88B-201ENST00000378821 IGLV7-43P04211 117 aa11.51□□□□□ -0.57
TMEM88B-201ENST00000378821 UBE2BP63146 152 aa11.5□□□□□ -0.57
TMEM88B-201ENST00000378821 C22orf24Q9Y442 160 aa11.5□□□□□ -0.57
TMEM88B-201ENST00000378821 IGKCP01834 107 aa11.49□□□□□ -0.57
TMEM88B-201ENST00000378821 SYS1-DBNDD2H3BUS1 97 aa11.48□□□□□ -0.57
TMEM88B-201ENST00000378821 TSPEAR-AS2P59090 65 aa11.48□□□□□ -0.57
TMEM88B-201ENST00000378821 COX17Q14061 63 aa11.48□□□□□ -0.57
TMEM88B-201ENST00000378821 LRP2P98164 4655 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms