RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 Q8IZM0 81 aa10.58□□□□□ -0.72
RER1-202ENST00000378512 CST9LQ9H4G1 147 aa10.58□□□□□ -0.72
RER1-202ENST00000378512 C2orf82Q6UX34 121 aa10.58□□□□□ -0.72
RER1-202ENST00000378512 PMVKQ15126 192 aa10.57□□□□□ -0.72
RER1-202ENST00000378512 C9orf116Q5BN46 136 aaPredicted RBP10.57□□□□□ -0.72
RER1-202ENST00000378512 GEMIN7Q9H840 131 aaKnown RBP10.57□□□□□ -0.72
RER1-202ENST00000378512 PLA2G2DQ9UNK4 145 aa10.56□□□□□ -0.72
RER1-202ENST00000378512 SMIM1B2RUZ4 78 aa10.55□□□□□ -0.72
RER1-202ENST00000378512 NDUFC2-KCTD14E9PQ53 114 aa10.54□□□□□ -0.72
RER1-202ENST00000378512 PDZD11Q5EBL8 140 aa10.54□□□□□ -0.72
RER1-202ENST00000378512 TNXBP22105 4242 aa10.54□□□□□ -0.72
RER1-202ENST00000378512 HBDP02042 147 aa10.53□□□□□ -0.72
RER1-202ENST00000378512 RAB5BP61020 215 aa10.53□□□□□ -0.72
RER1-202ENST00000378512 C6orf226Q5I0X4 101 aa10.53□□□□□ -0.72
RER1-202ENST00000378512 SLC7A5P1Q8MH63 180 aa10.53□□□□□ -0.72
RER1-202ENST00000378512 PACRGQ96M98 296 aaPredicted RBP10.53□□□□□ -0.72
RER1-202ENST00000378512 PRSS2P07478 247 aa10.52□□□□□ -0.73
RER1-202ENST00000378512 KRTAP7-1Q8IUC3 87 aa10.52□□□□□ -0.73
RER1-202ENST00000378512 CBLN2Q8IUK8 224 aa10.52□□□□□ -0.73
RER1-202ENST00000378512 LINC00469Q8N7U9 141 aa10.52□□□□□ -0.73
RER1-202ENST00000378512 IGLC3P0DOY3 106 aa10.51□□□□□ -0.73
RER1-202ENST00000378512 TOMM7Q9P0U1 55 aa10.51□□□□□ -0.73
RER1-202ENST00000378512 F8VRH5 84 aa10.5□□□□□ -0.73
RER1-202ENST00000378512 CXCL5P42830 114 aa10.5□□□□□ -0.73
RER1-202ENST00000378512 CKS1BP61024 79 aa10.5□□□□□ -0.73
RER1-202ENST00000378512 SRSF9Q13242 221 aaKnown RBP eCLIP10.5□□□□□ -0.732e-6■□□□□ 8.7
RER1-202ENST00000378512 FAM168BA1KXE4 195 aa10.5□□□□□ -0.73
RER1-202ENST00000378512 PMCHL1Q16048 86 aa10.5□□□□□ -0.73
RER1-202ENST00000378512 C9orf129Q5T035 196 aaKnown RBP10.5□□□□□ -0.73
RER1-202ENST00000378512 ODF1Q14990 250 aa10.49□□□□□ -0.73
RER1-202ENST00000378512 GAGE2EQ4V326 116 aa10.49□□□□□ -0.73
RER1-202ENST00000378512 PHF5AQ7RTV0 110 aaKnown RBP10.49□□□□□ -0.73
RER1-202ENST00000378512 CHCHD1Q96BP2 118 aaKnown RBP10.49□□□□□ -0.73
RER1-202ENST00000378512 GAGE2DQ9UEU5 116 aa10.49□□□□□ -0.73
RER1-202ENST00000378512 ATP5LO75964 103 aa10.48□□□□□ -0.73
RER1-202ENST00000378512 COX7B2Q8TF08 81 aa10.48□□□□□ -0.73
RER1-202ENST00000378512 PSORS1C2Q9UIG4 136 aa10.48□□□□□ -0.73
RER1-202ENST00000378512 IGLV5-39A0A0G2JS06 123 aa10.47□□□□□ -0.73
RER1-202ENST00000378512 SPINK6Q6UWN8 80 aa10.47□□□□□ -0.73
RER1-202ENST00000378512 SPINK8P0C7L1 97 aa10.46□□□□□ -0.74
RER1-202ENST00000378512 ZNF22P17026 224 aaPredicted RBP10.45□□□□□ -0.74
RER1-202ENST00000378512 KRTAP11-1Q8IUC1 163 aa10.45□□□□□ -0.74
RER1-202ENST00000378512 H3BRM9 83 aa10.44□□□□□ -0.74
RER1-202ENST00000378512 TRGC2P03986 189 aa10.44□□□□□ -0.74
RER1-202ENST00000378512 FAM19A5Q7Z5A7 132 aaPredicted RBP10.44□□□□□ -0.74
RER1-202ENST00000378512 COLCA2A8K830 154 aa10.42□□□□□ -0.74
RER1-202ENST00000378512 NDUFA6P56556 154 aa10.42□□□□□ -0.74
RER1-202ENST00000378512 BAGE3Q86Y29 109 aa10.42□□□□□ -0.74
RER1-202ENST00000378512 LINC01600Q96MT4 127 aa10.42□□□□□ -0.74
RER1-202ENST00000378512 TRAV12-1A0A0B4J245 112 aa10.41□□□□□ -0.74
RER1-202ENST00000378512 C11orf86A6NJI1 115 aa10.41□□□□□ -0.74
RER1-202ENST00000378512 M0QXV9 152 aa10.41□□□□□ -0.74
RER1-202ENST00000378512 LINC00310P59036 64 aa10.41□□□□□ -0.74
RER1-202ENST00000378512 IFI27L1Q96BM0 104 aa10.4□□□□□ -0.75
RER1-202ENST00000378512 XAGE1AQ9HD64 81 aa10.4□□□□□ -0.75
RER1-202ENST00000378512 C1orf137Q5JT78 98 aa10.39□□□□□ -0.75
RER1-202ENST00000378512 HSBP1O75506 76 aa10.38□□□□□ -0.75
RER1-202ENST00000378512 TP73-AS1Q9UF72 201 aa10.38□□□□□ -0.75
RER1-202ENST00000378512 CHTOPQ9Y3Y2 248 aaKnown RBP10.38□□□□□ -0.75
RER1-202ENST00000378512 LRP2P98164 4655 aa10.37□□□□□ -0.75
RER1-202ENST00000378512 IGLV7-43P04211 117 aa10.37□□□□□ -0.75
RER1-202ENST00000378512 REG3GQ6UW15 175 aa10.37□□□□□ -0.75
RER1-202ENST00000378512 FAM19A2Q8N3H0 131 aa10.37□□□□□ -0.75
RER1-202ENST00000378512 C22orf24Q9Y442 160 aa10.37□□□□□ -0.75
RER1-202ENST00000378512 KRTAP10-8P60410 259 aa10.35□□□□□ -0.75
RER1-202ENST00000378512 TMEM170BQ5T4T1 132 aa10.35□□□□□ -0.75
RER1-202ENST00000378512 IGLV5-37A0A075B6J1 123 aa10.34□□□□□ -0.75
RER1-202ENST00000378512 TMEM223A0PJW6 202 aa10.34□□□□□ -0.75
RER1-202ENST00000378512 SERF1AO75920 110 aa10.34□□□□□ -0.75
RER1-202ENST00000378512 ZNF625Q96I27 306 aaPredicted RBP10.34□□□□□ -0.75
RER1-202ENST00000378512 COX17Q14061 63 aa10.33□□□□□ -0.76
RER1-202ENST00000378512 SFTA2Q6UW10 78 aa10.33□□□□□ -0.76
RER1-202ENST00000378512 NUPR1O60356 82 aa10.33□□□□□ -0.76
RER1-202ENST00000378512 UBE2BP63146 152 aa10.33□□□□□ -0.76
RER1-202ENST00000378512 LBHQ53QV2 105 aaPredicted RBP10.33□□□□□ -0.76
RER1-202ENST00000378512 MRPL55Q7Z7F7 128 aaKnown RBP10.32□□□□□ -0.76
RER1-202ENST00000378512 ERG28Q9UKR5 140 aa10.32□□□□□ -0.76
RER1-202ENST00000378512 RNF213Q63HN8 5207 aa10.31□□□□□ -0.76
RER1-202ENST00000378512 LEPROTL1O95214 131 aa10.31□□□□□ -0.76
RER1-202ENST00000378512 H0Y9J4 135 aa10.3□□□□□ -0.76
RER1-202ENST00000378512 DIRC1Q969H9 104 aa10.3□□□□□ -0.76
RER1-202ENST00000378512 SCO1O75880 301 aa10.28□□□□□ -0.76
RER1-202ENST00000378512 PFN2P35080 140 aa10.28□□□□□ -0.76
RER1-202ENST00000378512 LINC00167Q96N53 147 aa10.28□□□□□ -0.76
RER1-202ENST00000378512 SND1-IT1Q9HBX3 110 aa10.27□□□□□ -0.77
RER1-202ENST00000378512 HSPB8Q9UJY1 196 aa10.26□□□□□ -0.77
RER1-202ENST00000378512 HIST1H2BKO60814 126 aa10.25□□□□□ -0.77
RER1-202ENST00000378512 HIST1H2BJP06899 126 aa10.25□□□□□ -0.77
RER1-202ENST00000378512 KRTAP1-4P0C5Y4 121 aa10.25□□□□□ -0.77
RER1-202ENST00000378512 VPREB1P12018 145 aa10.25□□□□□ -0.77
RER1-202ENST00000378512 HIST1H2BOP23527 126 aa10.25□□□□□ -0.77
RER1-202ENST00000378512 HIST1H2BBP33778 126 aa10.25□□□□□ -0.77
RER1-202ENST00000378512 HIST1H2BDP58876 126 aa10.25□□□□□ -0.77
RER1-202ENST00000378512 HIST1H2BCP62807 126 aa10.25□□□□□ -0.77
RER1-202ENST00000378512 HIST2H2BEQ16778 126 aa10.25□□□□□ -0.77
RER1-202ENST00000378512 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.25□□□□□ -0.77
RER1-202ENST00000378512 HIST1H2BHQ93079 126 aa10.25□□□□□ -0.77
RER1-202ENST00000378512 HIST1H2BNQ99877 126 aa10.25□□□□□ -0.77
RER1-202ENST00000378512 HIST1H2BMQ99879 126 aa10.25□□□□□ -0.77
RER1-202ENST00000378512 ZNF861PO60384 105 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms