RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 ZNF73O43830 326 aaPredicted RBP10.55□□□□□ -0.72
PRDM16-203ENST00000378391 ZNF702PQ9H963 129 aa10.55□□□□□ -0.72
PRDM16-203ENST00000378391 DOPEY1Q5JWR5 2465 aa10.55□□□□□ -0.72
PRDM16-203ENST00000378391 BBC3Q96PG8 261 aaPredicted RBP10.55□□□□□ -0.72
PRDM16-203ENST00000378391 CDC42SE2Q9NRR3 84 aa10.55□□□□□ -0.72
PRDM16-203ENST00000378391 TLN1Q9Y490 2541 aaKnown RBP10.54□□□□□ -0.72
PRDM16-203ENST00000378391 COX17Q14061 63 aa10.54□□□□□ -0.72
PRDM16-203ENST00000378391 FAM19A1Q7Z5A9 133 aa10.54□□□□□ -0.72
PRDM16-203ENST00000378391 DEFB131BA0A096LNP1 70 aa10.54□□□□□ -0.72
PRDM16-203ENST00000378391 UBE2D3P61077 147 aa10.53□□□□□ -0.72
PRDM16-203ENST00000378391 HCG22E2RYF7 251 aa10.53□□□□□ -0.72
PRDM16-203ENST00000378391 M0R378 163 aa10.52□□□□□ -0.72
PRDM16-203ENST00000378391 LINC00242Q5T6M2 205 aa10.52□□□□□ -0.72
PRDM16-203ENST00000378391 IGLV4-69A0A075B6H9 119 aa10.52□□□□□ -0.73
PRDM16-203ENST00000378391 Q8N3U1 123 aa10.52□□□□□ -0.73
PRDM16-203ENST00000378391 Q8IZM0 81 aa10.52□□□□□ -0.73
PRDM16-203ENST00000378391 CDIP1Q9H305 208 aa10.51□□□□□ -0.73
PRDM16-203ENST00000378391 NCOR2Q9Y618 2525 aa10.51□□□□□ -0.73
PRDM16-203ENST00000378391 IGF2RP11717 2491 aa10.51□□□□□ -0.73
PRDM16-203ENST00000378391 TSPEAR-AS2P59090 65 aa10.51□□□□□ -0.73
PRDM16-203ENST00000378391 DHRS4-AS1Q9P1J3 65 aa10.5□□□□□ -0.73
PRDM16-203ENST00000378391 LOC100131303A0A0U1RQF7 123 aa10.5□□□□□ -0.73
PRDM16-203ENST00000378391 LELP1Q5T871 98 aa10.5□□□□□ -0.73
PRDM16-203ENST00000378391 LCA10Q71F78 164 aa10.5□□□□□ -0.73
PRDM16-203ENST00000378391 LINC00482Q8N8I6 264 aa10.5□□□□□ -0.73
PRDM16-203ENST00000378391 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.5□□□□□ -0.73
PRDM16-203ENST00000378391 A0A096LNI7 61 aa10.49□□□□□ -0.73
PRDM16-203ENST00000378391 PRO0461Q9UI25 63 aa10.49□□□□□ -0.73
PRDM16-203ENST00000378391 AGRNO00468 2067 aa10.49□□□□□ -0.73
PRDM16-203ENST00000378391 XIRP2A4UGR9 3374 aa10.49□□□□□ -0.73
PRDM16-203ENST00000378391 CRIP2P52943 208 aaPredicted RBP10.48□□□□□ -0.73
PRDM16-203ENST00000378391 RPL28P46779 137 aaKnown RBP10.48□□□□□ -0.73
PRDM16-203ENST00000378391 HILS1P60008 231 aa10.48□□□□□ -0.73
PRDM16-203ENST00000378391 SMIM1B2RUZ4 78 aa10.48□□□□□ -0.73
PRDM16-203ENST00000378391 PRRC2CQ9Y520 2896 aaKnown RBP10.47□□□□□ -0.73
PRDM16-203ENST00000378391 NTM-AS1Q6ZSK4 140 aa10.47□□□□□ -0.73
PRDM16-203ENST00000378391 KTN1-AS1Q86SY8 53 aa10.47□□□□□ -0.73
PRDM16-203ENST00000378391 SMCPP49901 116 aaPredicted RBP10.46□□□□□ -0.73
PRDM16-203ENST00000378391 LINC01006Q8NI28 216 aa10.46□□□□□ -0.73
PRDM16-203ENST00000378391 IGKV2-28A0A075B6P5 120 aa10.45□□□□□ -0.74
PRDM16-203ENST00000378391 IGKV2D-28P01615 120 aa10.45□□□□□ -0.74
PRDM16-203ENST00000378391 AMELXQ99217 191 aa10.45□□□□□ -0.74
PRDM16-203ENST00000378391 hDV103S1A0JD37 113 aa10.45□□□□□ -0.74
PRDM16-203ENST00000378391 C18orf65Q6ZTR6 163 aa10.44□□□□□ -0.74
PRDM16-203ENST00000378391 BRI3O95415 125 aa10.44□□□□□ -0.74
PRDM16-203ENST00000378391 LINC01561Q8N1V8 128 aa10.44□□□□□ -0.74
PRDM16-203ENST00000378391 CHCHD7Q9BUK0 85 aa10.44□□□□□ -0.74
PRDM16-203ENST00000378391 PCOTHQ58A44 107 aa10.44□□□□□ -0.74
PRDM16-203ENST00000378391 ATP11AUNQ6ZP68 121 aa10.43□□□□□ -0.74
PRDM16-203ENST00000378391 LINC00336Q6ZUF6 198 aa10.43□□□□□ -0.74
PRDM16-203ENST00000378391 KPRPQ5T749 579 aaPredicted RBP10.43□□□□□ -0.74
PRDM16-203ENST00000378391 A0A1B0GU69 56 aa10.42□□□□□ -0.74
PRDM16-203ENST00000378391 CYSRT1A8MQ03 144 aa10.42□□□□□ -0.74
PRDM16-203ENST00000378391 ODF3L2Q3SX64 289 aa10.42□□□□□ -0.74
PRDM16-203ENST00000378391 C7orf65Q6ZTY9 151 aa10.42□□□□□ -0.74
PRDM16-203ENST00000378391 Q6ZVQ6 151 aa10.42□□□□□ -0.74
PRDM16-203ENST00000378391 ADAMTSL4-AS1Q5T5F5 129 aa10.41□□□□□ -0.74
PRDM16-203ENST00000378391 Q8N814 137 aa10.41□□□□□ -0.74
PRDM16-203ENST00000378391 TRAV10A0A0B4J240 114 aa10.4□□□□□ -0.74
PRDM16-203ENST00000378391 CDSNQ15517 529 aa10.4□□□□□ -0.75
PRDM16-203ENST00000378391 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.39□□□□□ -0.75
PRDM16-203ENST00000378391 AVPP01185 164 aa10.39□□□□□ -0.75
PRDM16-203ENST00000378391 COX6A2Q02221 97 aa10.39□□□□□ -0.75
PRDM16-203ENST00000378391 ZNF580Q9UK33 172 aa10.39□□□□□ -0.75
PRDM16-203ENST00000378391 USP9XQ93008 2570 aaPredicted RBP10.38□□□□□ -0.75
PRDM16-203ENST00000378391 INAFM1C9JVW0 142 aa10.38□□□□□ -0.75
PRDM16-203ENST00000378391 H0Y9P7 68 aa10.38□□□□□ -0.75
PRDM16-203ENST00000378391 UNQ6190/PRO20217Q6UXQ8 127 aa10.37□□□□□ -0.75
PRDM16-203ENST00000378391 EGFEM1PQ0D2K5 195 aa10.37□□□□□ -0.75
PRDM16-203ENST00000378391 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.36□□□□□ -0.75
PRDM16-203ENST00000378391 WIPF1O43516 503 aa10.36□□□□□ -0.75
PRDM16-203ENST00000378391 PLA2G1BP04054 148 aaKnown RBP10.36□□□□□ -0.75
PRDM16-203ENST00000378391 LINC01547P58512 204 aaPredicted RBP10.36□□□□□ -0.75
PRDM16-203ENST00000378391 SSBP3-AS1Q7Z2R9 100 aa10.36□□□□□ -0.75
PRDM16-203ENST00000378391 FAM19A4Q96LR4 140 aa10.35□□□□□ -0.75
PRDM16-203ENST00000378391 A0A087WYN8 130 aa10.35□□□□□ -0.75
PRDM16-203ENST00000378391 KIF25-AS1Q9Y6Z4 181 aa10.35□□□□□ -0.75
PRDM16-203ENST00000378391 TLN2Q9Y4G6 2542 aa10.34□□□□□ -0.75
PRDM16-203ENST00000378391 VCANP13611 3396 aa10.34□□□□□ -0.75
PRDM16-203ENST00000378391 PRRC2AP48634 2157 aaKnown RBP10.34□□□□□ -0.75
PRDM16-203ENST00000378391 IGLV4-60A0A075B6I1 120 aa10.34□□□□□ -0.75
PRDM16-203ENST00000378391 Q9UF83 564 aa10.34□□□□□ -0.75
PRDM16-203ENST00000378391 SZT2Q5T011 3432 aa10.34□□□□□ -0.75
PRDM16-203ENST00000378391 LAMA1P25391 3075 aa10.34□□□□□ -0.75
PRDM16-203ENST00000378391 SPINK1P00995 79 aa10.34□□□□□ -0.75
PRDM16-203ENST00000378391 RPL37AP8A6NKH3 93 aa10.33□□□□□ -0.76
PRDM16-203ENST00000378391 ABCA12Q86UK0 2595 aa10.32□□□□□ -0.76
PRDM16-203ENST00000378391 TRIOO75962 3097 aa10.32□□□□□ -0.76
PRDM16-203ENST00000378391 IGLV1-51P01701 117 aa10.31□□□□□ -0.76
PRDM16-203ENST00000378391 LINC00315P59091 139 aa10.31□□□□□ -0.76
PRDM16-203ENST00000378391 BCE1O60756 84 aa10.31□□□□□ -0.76
PRDM16-203ENST00000378391 C9orf116Q5BN46 136 aaPredicted RBP10.31□□□□□ -0.76
PRDM16-203ENST00000378391 LINC00846Q9NV44 126 aa10.31□□□□□ -0.76
PRDM16-203ENST00000378391 FHL2Q14192 279 aa10.3□□□□□ -0.76
PRDM16-203ENST00000378391 SPINK6Q6UWN8 80 aa10.3□□□□□ -0.76
PRDM16-203ENST00000378391 CYP4F30PQ9H0H9 118 aa10.3□□□□□ -0.76
PRDM16-203ENST00000378391 CFAP54Q96N23 3096 aa10.3□□□□□ -0.76
PRDM16-203ENST00000378391 JMJD1CQ15652 2540 aa10.3□□□□□ -0.76
PRDM16-203ENST00000378391 PRUNE2Q8WUY3 3088 aa10.3□□□□□ -0.76
PRDM16-203ENST00000378391 SBSPONQ8IVN8 264 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms