RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 RPL28P46779 137 aaKnown RBP13.88□□□□□ -0.19
PCDH8-202ENST00000377942 C6orf223Q8N319 242 aa13.88□□□□□ -0.19
PCDH8-202ENST00000377942 TSPEAR-AS2P59090 65 aa13.88□□□□□ -0.19
PCDH8-202ENST00000377942 AGRNO00468 2067 aa13.87□□□□□ -0.19
PCDH8-202ENST00000377942 C9orf116Q5BN46 136 aaPredicted RBP13.87□□□□□ -0.19
PCDH8-202ENST00000377942 ACANP16112 2415 aa13.87□□□□□ -0.19
PCDH8-202ENST00000377942 NDUFC2O95298 119 aa13.86□□□□□ -0.19
PCDH8-202ENST00000377942 SDIM1Q6ZPB5 146 aa13.86□□□□□ -0.19
PCDH8-202ENST00000377942 IGKV4-1P06312 121 aa13.86□□□□□ -0.19
PCDH8-202ENST00000377942 KRTAP24-1Q3LI83 254 aa13.86□□□□□ -0.19
PCDH8-202ENST00000377942 TRBV10-3A0A0K0K1G6 114 aa13.85□□□□□ -0.19
PCDH8-202ENST00000377942 NDUFV3P56181 108 aaKnown RBP13.84□□□□□ -0.19
PCDH8-202ENST00000377942 ENHOQ6UWT2 76 aa13.84□□□□□ -0.19
PCDH8-202ENST00000377942 COL27A1Q8IZC6 1860 aaPredicted RBP13.84□□□□□ -0.19
PCDH8-202ENST00000377942 LINC00315P59091 139 aa13.84□□□□□ -0.19
PCDH8-202ENST00000377942 IGLV5-52A0A0A0MRZ9 124 aa13.83□□□□□ -0.2
PCDH8-202ENST00000377942 C3orf84H3BNL1 204 aa13.83□□□□□ -0.2
PCDH8-202ENST00000377942 C1orf134Q5TEV5 83 aa13.83□□□□□ -0.2
PCDH8-202ENST00000377942 CELA1Q9UNI1 258 aa13.83□□□□□ -0.2
PCDH8-202ENST00000377942 LINC01546A6NGU7 62 aa13.83□□□□□ -0.2
PCDH8-202ENST00000377942 SCXQ7RTU7 201 aa13.83□□□□□ -0.2
PCDH8-202ENST00000377942 REG3GQ6UW15 175 aa13.82□□□□□ -0.2
PCDH8-202ENST00000377942 H3BNG1 76 aa13.82□□□□□ -0.2
PCDH8-202ENST00000377942 MT-ATP8P03928 68 aa13.81□□□□□ -0.2
PCDH8-202ENST00000377942 ADAMTSL4-AS1Q5T5F5 129 aa13.8□□□□□ -0.2
PCDH8-202ENST00000377942 IMUPQ9GZP8 106 aa13.8□□□□□ -0.2
PCDH8-202ENST00000377942 Q8N814 137 aa13.79□□□□□ -0.2
PCDH8-202ENST00000377942 LINC01556Q5JQF7 62 aa13.79□□□□□ -0.2
PCDH8-202ENST00000377942 NTM-AS1Q6ZSK4 140 aa13.79□□□□□ -0.2
PCDH8-202ENST00000377942 X6R8D5 127 aa13.78□□□□□ -0.2
PCDH8-202ENST00000377942 C10orf25Q5T742 122 aa13.77□□□□□ -0.21
PCDH8-202ENST00000377942 IGLV9-49A0A0B4J1Y8 123 aa13.75□□□□□ -0.21
PCDH8-202ENST00000377942 PRYO14603 147 aa13.75□□□□□ -0.21
PCDH8-202ENST00000377942 UQCRQO14949 82 aa13.75□□□□□ -0.21
PCDH8-202ENST00000377942 IGLV5-39A0A0G2JS06 123 aa13.74□□□□□ -0.21
PCDH8-202ENST00000377942 SPINK6Q6UWN8 80 aa13.74□□□□□ -0.21
PCDH8-202ENST00000377942 IGHV3OR16-9A0A0B4J2B5 98 aa13.73□□□□□ -0.21
PCDH8-202ENST00000377942 MRPL55Q7Z7F7 128 aaKnown RBP13.73□□□□□ -0.21
PCDH8-202ENST00000377942 C20orf197Q8N268 126 aa13.73□□□□□ -0.21
PCDH8-202ENST00000377942 PRR3P79522 188 aaKnown RBP13.73□□□□□ -0.21
PCDH8-202ENST00000377942 Q6ZRU5 148 aa13.72□□□□□ -0.21
PCDH8-202ENST00000377942 J3KT08 172 aa13.72□□□□□ -0.21
PCDH8-202ENST00000377942 F8P00451 2351 aa13.71□□□□□ -0.21
PCDH8-202ENST00000377942 ESRGQ1W209 222 aa13.71□□□□□ -0.21
PCDH8-202ENST00000377942 Q6JHZ5 121 aa13.7□□□□□ -0.22
PCDH8-202ENST00000377942 C5orf47Q569G3 176 aa13.7□□□□□ -0.22
PCDH8-202ENST00000377942 FAM240AA0A1B0GVK7 77 aa13.7□□□□□ -0.22
PCDH8-202ENST00000377942 A0A096LNT2 108 aa13.69□□□□□ -0.22
PCDH8-202ENST00000377942 C1orf137Q5JT78 98 aa13.69□□□□□ -0.22
PCDH8-202ENST00000377942 HRCT1Q6UXD1 115 aa13.69□□□□□ -0.22
PCDH8-202ENST00000377942 CASC2Q6XLA1 102 aa13.69□□□□□ -0.22
PCDH8-202ENST00000377942 SEC61GP60059 68 aa13.68□□□□□ -0.22
PCDH8-202ENST00000377942 SBSPONQ8IVN8 264 aa13.68□□□□□ -0.22
PCDH8-202ENST00000377942 MDFIQ99750 246 aa13.66□□□□□ -0.22
PCDH8-202ENST00000377942 A0A087WYN8 130 aa13.65□□□□□ -0.22
PCDH8-202ENST00000377942 FAM19A3Q7Z5A8 133 aa13.65□□□□□ -0.22
PCDH8-202ENST00000377942 WFDC13Q8IUB5 93 aa13.65□□□□□ -0.22
PCDH8-202ENST00000377942 IGLV5-45A0A087WSX0 123 aa13.64□□□□□ -0.23
PCDH8-202ENST00000377942 Q8NAQ8 132 aa13.64□□□□□ -0.23
PCDH8-202ENST00000377942 C3orf22Q8N5N4 141 aa13.62□□□□□ -0.23
PCDH8-202ENST00000377942 SERP2Q8N6R1 65 aa13.62□□□□□ -0.23
PCDH8-202ENST00000377942 LINC00575Q6W349 94 aa13.61□□□□□ -0.23
PCDH8-202ENST00000377942 NDUFC1O43677 76 aa13.61□□□□□ -0.23
PCDH8-202ENST00000377942 FLNBO75369 2602 aaKnown RBP13.6□□□□□ -0.23
PCDH8-202ENST00000377942 LINC00337Q8N6G1 96 aa13.59□□□□□ -0.23
PCDH8-202ENST00000377942 Q9BRP9 147 aa13.59□□□□□ -0.23
PCDH8-202ENST00000377942 MUC4Q99102 2169 aa13.59□□□□□ -0.23
PCDH8-202ENST00000377942 C22orf24Q9Y442 160 aa13.59□□□□□ -0.23
PCDH8-202ENST00000377942 A8MTW9 85 aa13.58□□□□□ -0.24
PCDH8-202ENST00000377942 FAM236DA0A1B0GTK5 79 aa13.57□□□□□ -0.24
PCDH8-202ENST00000377942 FAM236CP0DP71 79 aa13.57□□□□□ -0.24
PCDH8-202ENST00000377942 CIRBP-AS1Q8TBR5 109 aa13.56□□□□□ -0.24
PCDH8-202ENST00000377942 DNAH12Q6ZR08 3092 aa13.55□□□□□ -0.24
PCDH8-202ENST00000377942 XGP55808 180 aa13.54□□□□□ -0.24
PCDH8-202ENST00000377942 Q6Q795 121 aa13.54□□□□□ -0.24
PCDH8-202ENST00000377942 ATP5EP56381 51 aaPredicted RBP13.54□□□□□ -0.24
PCDH8-202ENST00000377942 Q9UF83 564 aa13.53□□□□□ -0.24
PCDH8-202ENST00000377942 C6orf48Q9UBA6 75 aa13.52□□□□□ -0.24
PCDH8-202ENST00000377942 COX7CP15954 63 aa13.49□□□□□ -0.25
PCDH8-202ENST00000377942 SMCR5Q8TEV8 140 aa13.49□□□□□ -0.25
PCDH8-202ENST00000377942 HECTD1Q9ULT8 2610 aa13.49□□□□□ -0.25
PCDH8-202ENST00000377942 NBDYA0A0U1RRE5 68 aa13.48□□□□□ -0.25
PCDH8-202ENST00000377942 PRLHP81277 87 aa13.48□□□□□ -0.25
PCDH8-202ENST00000377942 Q8N9L7 120 aa13.47□□□□□ -0.25
PCDH8-202ENST00000377942 CSNK1G2-AS1Q8NCQ2 148 aa13.47□□□□□ -0.25
PCDH8-202ENST00000377942 LINC00588Q9Y4M8 146 aa13.47□□□□□ -0.25
PCDH8-202ENST00000377942 A0A087WSZ3 146 aa13.46□□□□□ -0.25
PCDH8-202ENST00000377942 LINC00167Q96N53 147 aa13.45□□□□□ -0.26
PCDH8-202ENST00000377942 TRBV7-6A0A0J9YX20 115 aa13.45□□□□□ -0.26
PCDH8-202ENST00000377942 PRRC2CQ9Y520 2896 aaKnown RBP13.44□□□□□ -0.26
PCDH8-202ENST00000377942 TRAV7A0A075B6U4 112 aa13.43□□□□□ -0.26
PCDH8-202ENST00000377942 DNAH10OSP0CZ25 163 aa13.42□□□□□ -0.26
PCDH8-202ENST00000377942 WWC2-AS2Q96NR7 200 aa13.42□□□□□ -0.26
PCDH8-202ENST00000377942 SNURFQ9Y675 71 aa13.42□□□□□ -0.26
PCDH8-202ENST00000377942 KRTAP1-3Q8IUG1 177 aa13.41□□□□□ -0.26
PCDH8-202ENST00000377942 FAM30AQ9NZY2 134 aa13.41□□□□□ -0.26
PCDH8-202ENST00000377942 LIMD2Q9BT23 127 aa13.41□□□□□ -0.26
PCDH8-202ENST00000377942 C19orf73Q9NVV2 129 aa13.41□□□□□ -0.26
PCDH8-202ENST00000377942 GVQW2A0A096LPI5 108 aaPredicted RBP13.41□□□□□ -0.26
PCDH8-202ENST00000377942 V9GYY9 64 aa13.4□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms