RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 PRR3P79522 188 aaKnown RBP10.95□□□□□ -0.66
CSNK1A1-202ENST00000377843 KMT2BQ9UMN6 2715 aaPredicted RBP10.95□□□□□ -0.66
CSNK1A1-202ENST00000377843 IBA57-AS1B1ANH7 110 aa10.94□□□□□ -0.66
CSNK1A1-202ENST00000377843 TRAV10A0A0B4J240 114 aa10.94□□□□□ -0.66
CSNK1A1-202ENST00000377843 Q8N814 137 aa10.94□□□□□ -0.66
CSNK1A1-202ENST00000377843 RMI2Q96E14 147 aa10.94□□□□□ -0.66
CSNK1A1-202ENST00000377843 C11orf68Q9H3H3 251 aaKnown RBP10.94□□□□□ -0.66
CSNK1A1-202ENST00000377843 TEX15Q9BXT5 2789 aa10.94□□□□□ -0.66
CSNK1A1-202ENST00000377843 JMJD7-PLA2G4BH0Y9G9 81 aa10.93□□□□□ -0.66
CSNK1A1-202ENST00000377843 M0R2N4 97 aa10.93□□□□□ -0.66
CSNK1A1-202ENST00000377843 IGHV4-59P01825 116 aa10.93□□□□□ -0.66
CSNK1A1-202ENST00000377843 RPL35AP18077 110 aaKnown RBP10.93□□□□□ -0.66
CSNK1A1-202ENST00000377843 DEFB136Q30KP8 78 aa10.93□□□□□ -0.66
CSNK1A1-202ENST00000377843 C18orf65Q6ZTR6 163 aa10.93□□□□□ -0.66
CSNK1A1-202ENST00000377843 C1orf43Q9BWL3 253 aa10.93□□□□□ -0.66
CSNK1A1-202ENST00000377843 SLURP1P55000 103 aa10.93□□□□□ -0.66
CSNK1A1-202ENST00000377843 GCN1Q92616 2671 aaKnown RBP10.93□□□□□ -0.66
CSNK1A1-202ENST00000377843 ITPR2Q14571 2701 aa10.92□□□□□ -0.66
CSNK1A1-202ENST00000377843 IGLV4-60A0A075B6I1 120 aa10.92□□□□□ -0.66
CSNK1A1-202ENST00000377843 IGHV3OR16-9A0A0B4J2B5 98 aa10.92□□□□□ -0.66
CSNK1A1-202ENST00000377843 TRBV10-3A0A0K0K1G6 114 aa10.92□□□□□ -0.66
CSNK1A1-202ENST00000377843 UBE2L6O14933 153 aa10.92□□□□□ -0.66
CSNK1A1-202ENST00000377843 WFDC11Q8NEX6 87 aa10.92□□□□□ -0.66
CSNK1A1-202ENST00000377843 TRAV7A0A075B6U4 112 aa10.92□□□□□ -0.66
CSNK1A1-202ENST00000377843 LOC100131303A0A0U1RQF7 123 aa10.92□□□□□ -0.66
CSNK1A1-202ENST00000377843 UBL5Q9BZL1 73 aa10.92□□□□□ -0.66
CSNK1A1-202ENST00000377843 MAP6D1Q9H9H5 199 aa10.92□□□□□ -0.66
CSNK1A1-202ENST00000377843 PKIGQ9Y2B9 76 aa10.92□□□□□ -0.66
CSNK1A1-202ENST00000377843 MXRA5Q9NR99 2828 aa10.92□□□□□ -0.66
CSNK1A1-202ENST00000377843 INSP01308 110 aa10.91□□□□□ -0.66
CSNK1A1-202ENST00000377843 RNASE1P07998 156 aaKnown RBP10.91□□□□□ -0.66
CSNK1A1-202ENST00000377843 LINC00474Q9P2X8 69 aa10.91□□□□□ -0.66
CSNK1A1-202ENST00000377843 HECTD1Q9ULT8 2610 aa10.91□□□□□ -0.66
CSNK1A1-202ENST00000377843 IL17DQ8TAD2 202 aa10.91□□□□□ -0.66
CSNK1A1-202ENST00000377843 TRBV10-1A0A0K0K1A3 114 aa10.9□□□□□ -0.66
CSNK1A1-202ENST00000377843 KLKP1Q107X0 134 aa10.9□□□□□ -0.66
CSNK1A1-202ENST00000377843 UBE2E2Q96LR5 201 aa10.9□□□□□ -0.66
CSNK1A1-202ENST00000377843 C1orf158Q8N1D5 194 aa10.89□□□□□ -0.67
CSNK1A1-202ENST00000377843 FASNP49327 2511 aaKnown RBP10.89□□□□□ -0.67
CSNK1A1-202ENST00000377843 F8WEM9 126 aa10.88□□□□□ -0.67
CSNK1A1-202ENST00000377843 TMEM256-PLSCR3K7ERE1 68 aa10.88□□□□□ -0.67
CSNK1A1-202ENST00000377843 TMEM86BQ8N661 226 aa10.88□□□□□ -0.67
CSNK1A1-202ENST00000377843 SONP18583 2426 aaKnown RBP10.88□□□□□ -0.67
CSNK1A1-202ENST00000377843 NOTCH2Q04721 2471 aa10.88□□□□□ -0.67
CSNK1A1-202ENST00000377843 A0A087WZ39 114 aa10.87□□□□□ -0.67
CSNK1A1-202ENST00000377843 LINC01547P58512 204 aaPredicted RBP10.87□□□□□ -0.67
CSNK1A1-202ENST00000377843 LINC00482Q8N8I6 264 aa10.87□□□□□ -0.67
CSNK1A1-202ENST00000377843 AKAP9Q99996 3911 aa10.87□□□□□ -0.67
CSNK1A1-202ENST00000377843 SMIM26A0A096LP01 95 aa10.86□□□□□ -0.67
CSNK1A1-202ENST00000377843 Q6ZQT0 140 aa10.86□□□□□ -0.67
CSNK1A1-202ENST00000377843 DEFB112Q30KQ8 113 aa10.86□□□□□ -0.67
CSNK1A1-202ENST00000377843 ACANP16112 2415 aa10.85□□□□□ -0.67
CSNK1A1-202ENST00000377843 SPATA3Q8NHX4 192 aa10.84□□□□□ -0.67
CSNK1A1-202ENST00000377843 HAMPP81172 84 aa10.83□□□□□ -0.68
CSNK1A1-202ENST00000377843 ITPR3Q14573 2671 aa10.83□□□□□ -0.68
CSNK1A1-202ENST00000377843 TRBV7-6A0A0J9YX20 115 aa10.83□□□□□ -0.68
CSNK1A1-202ENST00000377843 BCE1O60756 84 aa10.83□□□□□ -0.68
CSNK1A1-202ENST00000377843 C6orf226Q5I0X4 101 aa10.83□□□□□ -0.68
CSNK1A1-202ENST00000377843 NOTCH3Q9UM47 2321 aa10.83□□□□□ -0.68
CSNK1A1-202ENST00000377843 Q6ZVQ6 151 aa10.82□□□□□ -0.68
CSNK1A1-202ENST00000377843 MSMBP08118 114 aa10.82□□□□□ -0.68
CSNK1A1-202ENST00000377843 Q8NDZ9 215 aa10.82□□□□□ -0.68
CSNK1A1-202ENST00000377843 TM2D3Q9BRN9 247 aa10.82□□□□□ -0.68
CSNK1A1-202ENST00000377843 NOP10Q9NPE3 64 aaKnown RBP10.82□□□□□ -0.68
CSNK1A1-202ENST00000377843 FLNAP21333 2647 aaKnown RBP10.81□□□□□ -0.68
CSNK1A1-202ENST00000377843 UNC79Q9P2D8 2635 aa10.8□□□□□ -0.68
CSNK1A1-202ENST00000377843 RBM3P98179 157 aaKnown RBP10.8□□□□□ -0.68
CSNK1A1-202ENST00000377843 C6orf99Q4VX62 202 aa10.8□□□□□ -0.68
CSNK1A1-202ENST00000377843 ODF3L2Q3SX64 289 aa10.79□□□□□ -0.68
CSNK1A1-202ENST00000377843 NF1P21359 2839 aa10.79□□□□□ -0.68
CSNK1A1-202ENST00000377843 LINC00959A0A1B0GUT2 108 aa10.78□□□□□ -0.68
CSNK1A1-202ENST00000377843 PLA2G2AP14555 144 aa10.78□□□□□ -0.68
CSNK1A1-202ENST00000377843 FAM229BQ4G0N7 80 aa10.78□□□□□ -0.68
CSNK1A1-202ENST00000377843 KHDC1LQ5JSQ8 128 aa10.78□□□□□ -0.68
CSNK1A1-202ENST00000377843 F8WDY8 70 aa10.78□□□□□ -0.68
CSNK1A1-202ENST00000377843 BRK1Q8WUW1 75 aa10.78□□□□□ -0.68
CSNK1A1-202ENST00000377843 LOC110117498A0A087WWA1 95 aa10.77□□□□□ -0.68
CSNK1A1-202ENST00000377843 TRBV7-4A0A0J9YYF1 115 aa10.77□□□□□ -0.68
CSNK1A1-202ENST00000377843 A0A0U1RQV1 116 aa10.77□□□□□ -0.68
CSNK1A1-202ENST00000377843 SCXQ7RTU7 201 aa10.77□□□□□ -0.68
CSNK1A1-202ENST00000377843 Q8N3U1 123 aa10.77□□□□□ -0.68
CSNK1A1-202ENST00000377843 ZNF702PQ9H963 129 aa10.77□□□□□ -0.68
CSNK1A1-202ENST00000377843 TRBV6-8A0A0A6YYG3 113 aa10.77□□□□□ -0.69
CSNK1A1-202ENST00000377843 DEFB114Q30KQ6 69 aa10.77□□□□□ -0.69
CSNK1A1-202ENST00000377843 LINC00575Q6W349 94 aa10.77□□□□□ -0.69
CSNK1A1-202ENST00000377843 PDZD2O15018 2839 aa10.77□□□□□ -0.69
CSNK1A1-202ENST00000377843 DYNLRB2Q8TF09 96 aa10.76□□□□□ -0.69
CSNK1A1-202ENST00000377843 C6orf223Q8N319 242 aa10.75□□□□□ -0.69
CSNK1A1-202ENST00000377843 LAMTOR3Q9UHA4 124 aa10.75□□□□□ -0.69
CSNK1A1-202ENST00000377843 SETD2Q9BYW2 2564 aaPredicted RBP10.75□□□□□ -0.69
CSNK1A1-202ENST00000377843 PLAC8L1A1L4L8 177 aa10.75□□□□□ -0.69
CSNK1A1-202ENST00000377843 MTORP42345 2549 aa10.75□□□□□ -0.69
CSNK1A1-202ENST00000377843 ZNF561-AS1K7EIQ3 104 aa10.74□□□□□ -0.69
CSNK1A1-202ENST00000377843 C9orf116Q5BN46 136 aaPredicted RBP10.74□□□□□ -0.69
CSNK1A1-202ENST00000377843 STHQ8IWL8 128 aa10.74□□□□□ -0.69
CSNK1A1-202ENST00000377843 MYO9AB2RTY4 2548 aa10.74□□□□□ -0.69
CSNK1A1-202ENST00000377843 TRGV2A0A075B6R0 118 aa10.74□□□□□ -0.69
CSNK1A1-202ENST00000377843 CLPSL2Q6UWE3 100 aa10.74□□□□□ -0.69
CSNK1A1-202ENST00000377843 B4DSR2 109 aa10.73□□□□□ -0.69
CSNK1A1-202ENST00000377843 MIFP14174 115 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms