RNA–Protein interactions for RNA: ENST00000377561.6

CNTNAP3B-203, Transcript of contactin associated protein like 3B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 5,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-203ENST00000377561 Q6ZSN1 163 aa13.4□□□□□ -0.26
CNTNAP3B-203ENST00000377561 SMR3AQ99954 134 aa13.4□□□□□ -0.26
CNTNAP3B-203ENST00000377561 DNAH12Q6ZR08 3092 aa13.4□□□□□ -0.26
CNTNAP3B-203ENST00000377561 CYSRT1A8MQ03 144 aa13.4□□□□□ -0.26
CNTNAP3B-203ENST00000377561 FHL2Q14192 279 aa13.4□□□□□ -0.26
CNTNAP3B-203ENST00000377561 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.4□□□□□ -0.26
CNTNAP3B-203ENST00000377561 Q6Q795 121 aa13.39□□□□□ -0.27
CNTNAP3B-203ENST00000377561 ADAMTSL4-AS1Q5T5F5 129 aa13.39□□□□□ -0.27
CNTNAP3B-203ENST00000377561 IGLV4-60A0A075B6I1 120 aa13.38□□□□□ -0.27
CNTNAP3B-203ENST00000377561 USP9YO00507 2555 aaPredicted RBP13.38□□□□□ -0.27
CNTNAP3B-203ENST00000377561 ABCA12Q86UK0 2595 aa13.38□□□□□ -0.27
CNTNAP3B-203ENST00000377561 SNURFQ9Y675 71 aa13.37□□□□□ -0.27
CNTNAP3B-203ENST00000377561 A0A0U1RQV1 116 aa13.37□□□□□ -0.27
CNTNAP3B-203ENST00000377561 RPL28P46779 137 aaKnown RBP13.35□□□□□ -0.27
CNTNAP3B-203ENST00000377561 A6NED7 52 aa13.35□□□□□ -0.27
CNTNAP3B-203ENST00000377561 FAM19A4Q96LR4 140 aa13.34□□□□□ -0.27
CNTNAP3B-203ENST00000377561 M0QXV9 152 aa13.34□□□□□ -0.27
CNTNAP3B-203ENST00000377561 PRR4Q16378 134 aa13.33□□□□□ -0.27
CNTNAP3B-203ENST00000377561 UNQ6190/PRO20217Q6UXQ8 127 aa13.33□□□□□ -0.28
CNTNAP3B-203ENST00000377561 EGFEM1PQ0D2K5 195 aa13.32□□□□□ -0.28
CNTNAP3B-203ENST00000377561 C10orf25Q5T742 122 aa13.32□□□□□ -0.28
CNTNAP3B-203ENST00000377561 PCSK5Q92824 1860 aa13.32□□□□□ -0.28
CNTNAP3B-203ENST00000377561 Q8N2B8 174 aa13.32□□□□□ -0.28
CNTNAP3B-203ENST00000377561 LINC00315P59091 139 aa13.31□□□□□ -0.28
CNTNAP3B-203ENST00000377561 NUPR2A6NF83 97 aa13.3□□□□□ -0.28
CNTNAP3B-203ENST00000377561 NTM-AS1Q6ZSK4 140 aa13.29□□□□□ -0.28
CNTNAP3B-203ENST00000377561 C11orf72Q8NBR9 251 aa13.28□□□□□ -0.28
CNTNAP3B-203ENST00000377561 A0A1B0GUV1 79 aa13.28□□□□□ -0.28
CNTNAP3B-203ENST00000377561 SPTBN4Q9H254 2564 aa13.28□□□□□ -0.28
CNTNAP3B-203ENST00000377561 FAM30AQ9NZY2 134 aa13.28□□□□□ -0.28
CNTNAP3B-203ENST00000377561 CHD8Q9HCK8 2581 aa13.28□□□□□ -0.28
CNTNAP3B-203ENST00000377561 RETNQ9HD89 108 aa13.28□□□□□ -0.28
CNTNAP3B-203ENST00000377561 C9orf116Q5BN46 136 aaPredicted RBP13.27□□□□□ -0.28
CNTNAP3B-203ENST00000377561 Q6JHZ5 121 aa13.27□□□□□ -0.28
CNTNAP3B-203ENST00000377561 PTPRBP23467 1997 aa13.27□□□□□ -0.29
CNTNAP3B-203ENST00000377561 JMJD1CQ15652 2540 aa13.26□□□□□ -0.29
CNTNAP3B-203ENST00000377561 Q8N814 137 aa13.26□□□□□ -0.29
CNTNAP3B-203ENST00000377561 C6orf223Q8N319 242 aa13.25□□□□□ -0.29
CNTNAP3B-203ENST00000377561 SETD2Q9BYW2 2564 aaPredicted RBP13.25□□□□□ -0.29
CNTNAP3B-203ENST00000377561 TRBV10-3A0A0K0K1G6 114 aa13.25□□□□□ -0.29
CNTNAP3B-203ENST00000377561 AGRNO00468 2067 aa13.24□□□□□ -0.29
CNTNAP3B-203ENST00000377561 CDIP1Q9H305 208 aa13.24□□□□□ -0.29
CNTNAP3B-203ENST00000377561 REG3GQ6UW15 175 aa13.24□□□□□ -0.29
CNTNAP3B-203ENST00000377561 A0A087WYN8 130 aa13.23□□□□□ -0.29
CNTNAP3B-203ENST00000377561 C1orf137Q5JT78 98 aa13.23□□□□□ -0.29
CNTNAP3B-203ENST00000377561 FN1P02751 2386 aaKnown RBP13.23□□□□□ -0.29
CNTNAP3B-203ENST00000377561 Q6ZVQ6 151 aa13.23□□□□□ -0.29
CNTNAP3B-203ENST00000377561 CELA1Q9UNI1 258 aa13.22□□□□□ -0.29
CNTNAP3B-203ENST00000377561 PRR3P79522 188 aaKnown RBP13.22□□□□□ -0.29
CNTNAP3B-203ENST00000377561 LINC01561Q8N1V8 128 aa13.21□□□□□ -0.29
CNTNAP3B-203ENST00000377561 ZFYVE26Q68DK2 2539 aa13.21□□□□□ -0.29
CNTNAP3B-203ENST00000377561 KLK9Q2XQG4 91 aa13.21□□□□□ -0.29
CNTNAP3B-203ENST00000377561 Q6ZTC4 211 aa13.21□□□□□ -0.29
CNTNAP3B-203ENST00000377561 COL27A1Q8IZC6 1860 aaPredicted RBP13.21□□□□□ -0.3
CNTNAP3B-203ENST00000377561 CIRBP-AS1Q8TBR5 109 aa13.21□□□□□ -0.3
CNTNAP3B-203ENST00000377561 A0A087WVE0 104 aa13.2□□□□□ -0.3
CNTNAP3B-203ENST00000377561 ESRGQ1W209 222 aa13.2□□□□□ -0.3
CNTNAP3B-203ENST00000377561 CEP350Q5VT06 3117 aa13.2□□□□□ -0.3
CNTNAP3B-203ENST00000377561 IGLV5-52A0A0A0MRZ9 124 aa13.19□□□□□ -0.3
CNTNAP3B-203ENST00000377561 IGLV5-39A0A0G2JS06 123 aa13.19□□□□□ -0.3
CNTNAP3B-203ENST00000377561 C1orf195Q5TG92 126 aa13.18□□□□□ -0.3
CNTNAP3B-203ENST00000377561 UTRNP46939 3433 aa13.16□□□□□ -0.3
CNTNAP3B-203ENST00000377561 LINC00208Q96KT6 92 aa13.15□□□□□ -0.3
CNTNAP3B-203ENST00000377561 ZNF462Q96JM2 2506 aa13.14□□□□□ -0.31
CNTNAP3B-203ENST00000377561 LYPD5Q6UWN5 251 aa13.14□□□□□ -0.31
CNTNAP3B-203ENST00000377561 LRRK2Q5S007 2527 aa13.13□□□□□ -0.31
CNTNAP3B-203ENST00000377561 TRAV7A0A075B6U4 112 aa13.13□□□□□ -0.31
CNTNAP3B-203ENST00000377561 FHL3Q13643 280 aa13.13□□□□□ -0.31
CNTNAP3B-203ENST00000377561 IGHV6-1A0A0B4J1U7 121 aa13.13□□□□□ -0.31
CNTNAP3B-203ENST00000377561 SMIM26A0A096LP01 95 aa13.12□□□□□ -0.31
CNTNAP3B-203ENST00000377561 F8WDY8 70 aa13.12□□□□□ -0.31
CNTNAP3B-203ENST00000377561 LINC00337Q8N6G1 96 aa13.12□□□□□ -0.31
CNTNAP3B-203ENST00000377561 LINC01556Q5JQF7 62 aa13.12□□□□□ -0.31
CNTNAP3B-203ENST00000377561 C2orf48Q96LS8 159 aa13.11□□□□□ -0.31
CNTNAP3B-203ENST00000377561 Q9BRP9 147 aa13.1□□□□□ -0.31
CNTNAP3B-203ENST00000377561 IGHV3OR16-9A0A0B4J2B5 98 aa13.1□□□□□ -0.31
CNTNAP3B-203ENST00000377561 IGLV5-45A0A087WSX0 123 aa13.09□□□□□ -0.31
CNTNAP3B-203ENST00000377561 SMCPP49901 116 aaPredicted RBP13.09□□□□□ -0.31
CNTNAP3B-203ENST00000377561 LINC01547P58512 204 aaPredicted RBP13.09□□□□□ -0.31
CNTNAP3B-203ENST00000377561 TRBV7-6A0A0J9YX20 115 aa13.08□□□□□ -0.32
CNTNAP3B-203ENST00000377561 C1orf134Q5TEV5 83 aa13.07□□□□□ -0.32
CNTNAP3B-203ENST00000377561 PRYO14603 147 aa13.06□□□□□ -0.32
CNTNAP3B-203ENST00000377561 LINC00575Q6W349 94 aa13.06□□□□□ -0.32
CNTNAP3B-203ENST00000377561 PKD1L2Q7Z442 2459 aa13.06□□□□□ -0.32
CNTNAP3B-203ENST00000377561 PRO0461Q9UI25 63 aa13.05□□□□□ -0.32
CNTNAP3B-203ENST00000377561 A0A087WSZ3 146 aa13.05□□□□□ -0.32
CNTNAP3B-203ENST00000377561 FSHBP01225 129 aa13.05□□□□□ -0.32
CNTNAP3B-203ENST00000377561 Q9UF83 564 aa13.04□□□□□ -0.32
CNTNAP3B-203ENST00000377561 X6R8D5 127 aa13.04□□□□□ -0.32
CNTNAP3B-203ENST00000377561 MTORP42345 2549 aa13.04□□□□□ -0.32
CNTNAP3B-203ENST00000377561 Q8N3U1 123 aa13.03□□□□□ -0.32
CNTNAP3B-203ENST00000377561 RETNLBQ9BQ08 111 aa13.02□□□□□ -0.32
CNTNAP3B-203ENST00000377561 TRBV7-7A0A0K0K1E9 115 aa13.02□□□□□ -0.33
CNTNAP3B-203ENST00000377561 POLQO75417 2590 aa13.02□□□□□ -0.33
CNTNAP3B-203ENST00000377561 Q6ZRU5 148 aa13.01□□□□□ -0.33
CNTNAP3B-203ENST00000377561 SOSTDC1Q6X4U4 206 aa13.01□□□□□ -0.33
CNTNAP3B-203ENST00000377561 ANKRD17O75179 2603 aaKnown RBP13□□□□□ -0.33
CNTNAP3B-203ENST00000377561 PCOTHQ58A44 107 aa13□□□□□ -0.33
CNTNAP3B-203ENST00000377561 LINC00846Q9NV44 126 aa12.99□□□□□ -0.33
CNTNAP3B-203ENST00000377561 A8MTW9 85 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms