RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 NXT2Q9NPJ8 142 aaKnown RBP11.09□□□□□ -0.63
HDAC6-202ENST00000376610 CARHSP1Q9Y2V2 147 aaKnown RBP11.09□□□□□ -0.63
HDAC6-202ENST00000376610 PRR4Q16378 134 aa11.08□□□□□ -0.64
HDAC6-202ENST00000376610 FAM19A3Q7Z5A8 133 aa11.08□□□□□ -0.64
HDAC6-202ENST00000376610 GEMIN7Q9H840 131 aaKnown RBP11.08□□□□□ -0.64
HDAC6-202ENST00000376610 C22orf24Q9Y442 160 aa11.08□□□□□ -0.64
HDAC6-202ENST00000376610 XAGE1AQ9HD64 81 aa11.07□□□□□ -0.64
HDAC6-202ENST00000376610 IGIPA6NJ69 53 aa11.06□□□□□ -0.64
HDAC6-202ENST00000376610 F8VRH5 84 aa11.06□□□□□ -0.64
HDAC6-202ENST00000376610 CTDSP1Q9GZU7 261 aa11.06□□□□□ -0.64
HDAC6-202ENST00000376610 CXCL5P42830 114 aa11.05□□□□□ -0.64
HDAC6-202ENST00000376610 CDKN2A-AS1Q9UH64 79 aa11.05□□□□□ -0.64
HDAC6-202ENST00000376610 TIMM17AQ99595 171 aa11.04□□□□□ -0.64
HDAC6-202ENST00000376610 RPL28P46779 137 aaKnown RBP11.03□□□□□ -0.64
HDAC6-202ENST00000376610 MRPL55Q7Z7F7 128 aaKnown RBP11.03□□□□□ -0.64
HDAC6-202ENST00000376610 TP73-AS1Q9UF72 201 aa11.03□□□□□ -0.64
HDAC6-202ENST00000376610 RAB14P61106 215 aa11.02□□□□□ -0.65
HDAC6-202ENST00000376610 TOMM6Q96B49 74 aa11.01□□□□□ -0.65
HDAC6-202ENST00000376610 BCE1O60756 84 aa10.99□□□□□ -0.65
HDAC6-202ENST00000376610 ERASQ7Z444 233 aa10.99□□□□□ -0.65
HDAC6-202ENST00000376610 SCGB3A1Q96QR1 104 aa10.99□□□□□ -0.65
HDAC6-202ENST00000376610 PDZD11Q5EBL8 140 aa10.98□□□□□ -0.65
HDAC6-202ENST00000376610 COX7B2Q8TF08 81 aa10.98□□□□□ -0.65
HDAC6-202ENST00000376610 LINC01549A6NIU2 74 aa10.97□□□□□ -0.65
HDAC6-202ENST00000376610 TSPAN13O95857 204 aa10.97□□□□□ -0.65
HDAC6-202ENST00000376610 TINCRA0A1B0GVN0 87 aa10.96□□□□□ -0.65
HDAC6-202ENST00000376610 SMIM1B2RUZ4 78 aa10.96□□□□□ -0.65
HDAC6-202ENST00000376610 CRYGAP11844 174 aa10.96□□□□□ -0.65
HDAC6-202ENST00000376610 KIAA1644Q3SXP7 199 aa10.95□□□□□ -0.66
HDAC6-202ENST00000376610 TYMSOSQ8TAI1 123 aa10.95□□□□□ -0.66
HDAC6-202ENST00000376610 LINC00167Q96N53 147 aa10.95□□□□□ -0.66
HDAC6-202ENST00000376610 MUC2Q02817 5179 aa10.95□□□□□ -0.66
HDAC6-202ENST00000376610 A0A0U1RQV1 116 aa10.94□□□□□ -0.66
HDAC6-202ENST00000376610 RPL37AP8A6NKH3 93 aa10.94□□□□□ -0.66
HDAC6-202ENST00000376610 NKAPP1Q8N9T2 125 aa10.94□□□□□ -0.66
HDAC6-202ENST00000376610 GAGE10A6NGK3 116 aa10.93□□□□□ -0.66
HDAC6-202ENST00000376610 TRAV9-1A0A075B6T8 112 aa10.92□□□□□ -0.66
HDAC6-202ENST00000376610 IGLV5-45A0A087WSX0 123 aa10.92□□□□□ -0.66
HDAC6-202ENST00000376610 A0A087X002 238 aa10.92□□□□□ -0.66
HDAC6-202ENST00000376610 UBE2AP49459 152 aa10.92□□□□□ -0.66
HDAC6-202ENST00000376610 RAB5BP61020 215 aa10.92□□□□□ -0.66
HDAC6-202ENST00000376610 H3BRM9 83 aa10.91□□□□□ -0.66
HDAC6-202ENST00000376610 ADCYAP1P18509 176 aa10.91□□□□□ -0.66
HDAC6-202ENST00000376610 ATP5LO75964 103 aa10.9□□□□□ -0.66
HDAC6-202ENST00000376610 SPINK8P0C7L1 97 aa10.9□□□□□ -0.66
HDAC6-202ENST00000376610 MRPL18Q9H0U6 180 aaKnown RBP10.9□□□□□ -0.66
HDAC6-202ENST00000376610 CST9LQ9H4G1 147 aa10.9□□□□□ -0.66
HDAC6-202ENST00000376610 IGLV5-37A0A075B6J1 123 aa10.89□□□□□ -0.67
HDAC6-202ENST00000376610 S100PP25815 95 aa10.89□□□□□ -0.67
HDAC6-202ENST00000376610 PMVKQ15126 192 aa10.89□□□□□ -0.67
HDAC6-202ENST00000376610 SMCO4Q9NRQ5 59 aa10.88□□□□□ -0.67
HDAC6-202ENST00000376610 FA2HQ7L5A8 372 aa10.87□□□□□ -0.67
HDAC6-202ENST00000376610 GNB1LQ9BYB4 327 aa10.87□□□□□ -0.67
HDAC6-202ENST00000376610 LINC01546A6NGU7 62 aa10.86□□□□□ -0.67
HDAC6-202ENST00000376610 IGKV2-28A0A075B6P5 120 aa10.85□□□□□ -0.67
HDAC6-202ENST00000376610 IGKV2D-28P01615 120 aa10.85□□□□□ -0.67
HDAC6-202ENST00000376610 COX19Q49B96 90 aa10.85□□□□□ -0.67
HDAC6-202ENST00000376610 CLLU1Q5K131 121 aa10.85□□□□□ -0.67
HDAC6-202ENST00000376610 ANAPC11Q9NYG5 84 aa10.85□□□□□ -0.67
HDAC6-202ENST00000376610 PFN2P35080 140 aa10.84□□□□□ -0.67
HDAC6-202ENST00000376610 FAM229BQ4G0N7 80 aa10.84□□□□□ -0.67
HDAC6-202ENST00000376610 UQCC3Q6UW78 93 aa10.84□□□□□ -0.67
HDAC6-202ENST00000376610 KRTAP13-1Q8IUC0 172 aa10.83□□□□□ -0.68
HDAC6-202ENST00000376610 IGKV2D-26A0A0A0MRZ7 120 aa10.82□□□□□ -0.68
HDAC6-202ENST00000376610 TMEM218A2RU14 115 aa10.82□□□□□ -0.68
HDAC6-202ENST00000376610 LINC00304Q8N9R0 145 aa10.82□□□□□ -0.68
HDAC6-202ENST00000376610 NDUFA6P56556 154 aa10.81□□□□□ -0.68
HDAC6-202ENST00000376610 RPL24P83731 157 aaKnown RBP10.81□□□□□ -0.68
HDAC6-202ENST00000376610 FABP9Q0Z7S8 132 aa10.81□□□□□ -0.68
HDAC6-202ENST00000376610 KRTAP13-2Q52LG2 175 aa10.81□□□□□ -0.68
HDAC6-202ENST00000376610 IGLC3P0DOY3 106 aa10.8□□□□□ -0.68
HDAC6-202ENST00000376610 FAM19A1Q7Z5A9 133 aa10.8□□□□□ -0.68
HDAC6-202ENST00000376610 IGLV5-39A0A0G2JS06 123 aa10.79□□□□□ -0.68
HDAC6-202ENST00000376610 SCO1O75880 301 aa10.79□□□□□ -0.68
HDAC6-202ENST00000376610 PRLHP81277 87 aa10.79□□□□□ -0.68
HDAC6-202ENST00000376610 ERG28Q9UKR5 140 aa10.79□□□□□ -0.68
HDAC6-202ENST00000376610 COX17Q14061 63 aa10.78□□□□□ -0.68
HDAC6-202ENST00000376610 SEC11CQ9BY50 192 aa10.78□□□□□ -0.68
HDAC6-202ENST00000376610 SND1-IT1Q9HBX3 110 aa10.78□□□□□ -0.68
HDAC6-202ENST00000376610 SFTA2Q6UW10 78 aa10.77□□□□□ -0.69
HDAC6-202ENST00000376610 RETNLBQ9BQ08 111 aa10.77□□□□□ -0.69
HDAC6-202ENST00000376610 TMEM126AQ9H061 195 aa10.77□□□□□ -0.69
HDAC6-202ENST00000376610 VPREB1P12018 145 aa10.76□□□□□ -0.69
HDAC6-202ENST00000376610 TMEM238C9JI98 176 aa10.75□□□□□ -0.69
HDAC6-202ENST00000376610 ZNF22P17026 224 aaPredicted RBP10.75□□□□□ -0.69
HDAC6-202ENST00000376610 CTAG1AP78358 180 aa10.74□□□□□ -0.69
HDAC6-202ENST00000376610 ZNF625Q96I27 306 aaPredicted RBP10.74□□□□□ -0.69
HDAC6-202ENST00000376610 CDIP1Q9H305 208 aa10.74□□□□□ -0.69
HDAC6-202ENST00000376610 HBDP02042 147 aa10.73□□□□□ -0.69
HDAC6-202ENST00000376610 CBLN2Q8IUK8 224 aa10.73□□□□□ -0.69
HDAC6-202ENST00000376610 TMEM170BQ5T4T1 132 aa10.72□□□□□ -0.69
HDAC6-202ENST00000376610 M0R378 163 aa10.71□□□□□ -0.69
HDAC6-202ENST00000376610 LINC00614P0C842 121 aa10.71□□□□□ -0.69
HDAC6-202ENST00000376610 RHEBQ15382 184 aa10.71□□□□□ -0.69
HDAC6-202ENST00000376610 RPS10P5Q9NQ39 176 aa10.71□□□□□ -0.69
HDAC6-202ENST00000376610 IGLV7-46A0A075B6I9 117 aa10.7□□□□□ -0.7
HDAC6-202ENST00000376610 A0A096LNJ9 63 aa10.7□□□□□ -0.7
HDAC6-202ENST00000376610 TPRXLQ17RH7 258 aa10.7□□□□□ -0.7
HDAC6-202ENST00000376610 BAGE3Q86Y29 109 aa10.7□□□□□ -0.7
HDAC6-202ENST00000376610 PLEKHB2Q96CS7 222 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms