RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 Q6ZRU5 148 aa12.13□□□□□ -0.47
MCF2L-203ENST00000375604 EGFEM1PQ0D2K5 195 aa12.12□□□□□ -0.47
MCF2L-203ENST00000375604 SPINK1P00995 79 aa12.12□□□□□ -0.47
MCF2L-203ENST00000375604 NTM-AS1Q6ZSK4 140 aa12.12□□□□□ -0.47
MCF2L-203ENST00000375604 MRPL55Q7Z7F7 128 aaKnown RBP12.12□□□□□ -0.47
MCF2L-203ENST00000375604 PCOTHQ58A44 107 aa12.11□□□□□ -0.47
MCF2L-203ENST00000375604 Q8N9L7 120 aa12.11□□□□□ -0.47
MCF2L-203ENST00000375604 FHL3Q13643 280 aa12.1□□□□□ -0.47
MCF2L-203ENST00000375604 SBSPONQ8IVN8 264 aa12.1□□□□□ -0.47
MCF2L-203ENST00000375604 Q6Q795 121 aa12.08□□□□□ -0.48
MCF2L-203ENST00000375604 A6NED7 52 aa12.08□□□□□ -0.48
MCF2L-203ENST00000375604 PRR15LQ9BU68 103 aa12.08□□□□□ -0.48
MCF2L-203ENST00000375604 SERP1Q9Y6X1 66 aa12.08□□□□□ -0.48
MCF2L-203ENST00000375604 LINC01547P58512 204 aaPredicted RBP12.07□□□□□ -0.48
MCF2L-203ENST00000375604 Q8N3U1 123 aa12.07□□□□□ -0.48
MCF2L-203ENST00000375604 SERP2Q8N6R1 65 aa12.07□□□□□ -0.48
MCF2L-203ENST00000375604 SONP18583 2426 aaKnown RBP12.07□□□□□ -0.48
MCF2L-203ENST00000375604 K7ERS5 55 aa12.07□□□□□ -0.48
MCF2L-203ENST00000375604 MDFIQ99750 246 aa12.07□□□□□ -0.48
MCF2L-203ENST00000375604 LINC00575Q6W349 94 aa12.06□□□□□ -0.48
MCF2L-203ENST00000375604 LINC00208Q96KT6 92 aa12.06□□□□□ -0.48
MCF2L-203ENST00000375604 AGRNO00468 2067 aa12.06□□□□□ -0.48
MCF2L-203ENST00000375604 ACACBO00763 2458 aa12.05□□□□□ -0.48
MCF2L-203ENST00000375604 AMELXQ99217 191 aa12.05□□□□□ -0.48
MCF2L-203ENST00000375604 A0A087WSZ3 146 aa12.04□□□□□ -0.48
MCF2L-203ENST00000375604 WDR87Q6ZQQ6 2873 aa12.04□□□□□ -0.48
MCF2L-203ENST00000375604 A0A096LNJ9 63 aa12.04□□□□□ -0.48
MCF2L-203ENST00000375604 SOSTDC1Q6X4U4 206 aa12.03□□□□□ -0.48
MCF2L-203ENST00000375604 BEAN1Q3B7T3 259 aa12.02□□□□□ -0.49
MCF2L-203ENST00000375604 NAV3Q8IVL0 2385 aa12.02□□□□□ -0.49
MCF2L-203ENST00000375604 CENPFP49454 3210 aa12.02□□□□□ -0.49
MCF2L-203ENST00000375604 FAM240AA0A1B0GVK7 77 aa12.01□□□□□ -0.49
MCF2L-203ENST00000375604 C22orf24Q9Y442 160 aa12□□□□□ -0.49
MCF2L-203ENST00000375604 CHTF8P0CG12 524 aa11.99□□□□□ -0.49
MCF2L-203ENST00000375604 IGF2RP11717 2491 aa11.99□□□□□ -0.49
MCF2L-203ENST00000375604 C2orf48Q96LS8 159 aa11.99□□□□□ -0.49
MCF2L-203ENST00000375604 Q6JHZ5 121 aa11.98□□□□□ -0.49
MCF2L-203ENST00000375604 Q9UF83 564 aa11.98□□□□□ -0.49
MCF2L-203ENST00000375604 COX7CP15954 63 aa11.97□□□□□ -0.49
MCF2L-203ENST00000375604 C11orf72Q8NBR9 251 aa11.96□□□□□ -0.49
MCF2L-203ENST00000375604 SMCR5Q8TEV8 140 aa11.96□□□□□ -0.49
MCF2L-203ENST00000375604 COL27A1Q8IZC6 1860 aaPredicted RBP11.96□□□□□ -0.5
MCF2L-203ENST00000375604 TRBV7-6A0A0J9YX20 115 aa11.96□□□□□ -0.5
MCF2L-203ENST00000375604 COL4A2P08572 1712 aa11.96□□□□□ -0.5
MCF2L-203ENST00000375604 KRTAP24-1Q3LI83 254 aa11.95□□□□□ -0.5
MCF2L-203ENST00000375604 A0A1B0GUV1 79 aa11.94□□□□□ -0.5
MCF2L-203ENST00000375604 LINC00337Q8N6G1 96 aa11.94□□□□□ -0.5
MCF2L-203ENST00000375604 CSDC2Q9Y534 153 aaKnown RBP11.93□□□□□ -0.5
MCF2L-203ENST00000375604 ABCA2Q9BZC7 2435 aa11.93□□□□□ -0.5
MCF2L-203ENST00000375604 PTPRBP23467 1997 aa11.93□□□□□ -0.5
MCF2L-203ENST00000375604 FSHBP01225 129 aa11.93□□□□□ -0.5
MCF2L-203ENST00000375604 SPACA4Q8TDM5 124 aa11.92□□□□□ -0.5
MCF2L-203ENST00000375604 PRYO14603 147 aa11.92□□□□□ -0.5
MCF2L-203ENST00000375604 NCOR2Q9Y618 2525 aa11.92□□□□□ -0.5
MCF2L-203ENST00000375604 HCG22E2RYF7 251 aa11.91□□□□□ -0.5
MCF2L-203ENST00000375604 ATRXP46100 2492 aa11.91□□□□□ -0.5
MCF2L-203ENST00000375604 KIAA0087Q14695 138 aa11.91□□□□□ -0.5
MCF2L-203ENST00000375604 H0Y9P7 68 aa11.9□□□□□ -0.5
MCF2L-203ENST00000375604 PHF5AQ7RTV0 110 aaKnown RBP11.9□□□□□ -0.5
MCF2L-203ENST00000375604 NAV2Q8IVL1 2488 aa11.9□□□□□ -0.51
MCF2L-203ENST00000375604 CCDC168Q8NDH2 2452 aa11.9□□□□□ -0.51
MCF2L-203ENST00000375604 NDUFC1O43677 76 aa11.89□□□□□ -0.51
MCF2L-203ENST00000375604 IMUPQ9GZP8 106 aa11.89□□□□□ -0.51
MCF2L-203ENST00000375604 Q8N2B8 174 aa11.88□□□□□ -0.51
MCF2L-203ENST00000375604 MUC7Q8TAX7 377 aa11.88□□□□□ -0.51
MCF2L-203ENST00000375604 PSPHP1O15172 72 aa11.88□□□□□ -0.51
MCF2L-203ENST00000375604 MOBPQ13875 183 aa11.88□□□□□ -0.51
MCF2L-203ENST00000375604 IGKV2D-30A0A075B6S6 120 aa11.87□□□□□ -0.51
MCF2L-203ENST00000375604 IGKV2-30P06310 120 aa11.87□□□□□ -0.51
MCF2L-203ENST00000375604 KIF25-AS1Q9Y6Z4 181 aa11.87□□□□□ -0.51
MCF2L-203ENST00000375604 COX8CQ7Z4L0 72 aa11.87□□□□□ -0.51
MCF2L-203ENST00000375604 C6orf48Q9UBA6 75 aa11.86□□□□□ -0.51
MCF2L-203ENST00000375604 NHLRC4P0CG21 123 aaPredicted RBP11.86□□□□□ -0.51
MCF2L-203ENST00000375604 LINC00846Q9NV44 126 aa11.86□□□□□ -0.51
MCF2L-203ENST00000375604 CRYGAP11844 174 aa11.85□□□□□ -0.51
MCF2L-203ENST00000375604 V9GYY9 64 aa11.85□□□□□ -0.51
MCF2L-203ENST00000375604 TRAV7A0A075B6U4 112 aa11.85□□□□□ -0.51
MCF2L-203ENST00000375604 LINC00167Q96N53 147 aa11.85□□□□□ -0.51
MCF2L-203ENST00000375604 ATP5EP56381 51 aaPredicted RBP11.84□□□□□ -0.51
MCF2L-203ENST00000375604 LINC00315P59091 139 aa11.84□□□□□ -0.51
MCF2L-203ENST00000375604 SMIM29Q86T20 159 aa11.81□□□□□ -0.52
MCF2L-203ENST00000375604 DNAH12Q6ZR08 3092 aa11.81□□□□□ -0.52
MCF2L-203ENST00000375604 TRBV7-7A0A0K0K1E9 115 aa11.8□□□□□ -0.52
MCF2L-203ENST00000375604 RTL8CO15255 209 aa11.8□□□□□ -0.52
MCF2L-203ENST00000375604 FAM19A4Q96LR4 140 aa11.8□□□□□ -0.52
MCF2L-203ENST00000375604 C7orf65Q6ZTY9 151 aa11.78□□□□□ -0.52
MCF2L-203ENST00000375604 ST20-AS1Q8NBB2 130 aa11.77□□□□□ -0.53
MCF2L-203ENST00000375604 FAM218AQ96MZ4 157 aa11.76□□□□□ -0.53
MCF2L-203ENST00000375604 FAM168BA1KXE4 195 aa11.76□□□□□ -0.53
MCF2L-203ENST00000375604 LINC00588Q9Y4M8 146 aa11.76□□□□□ -0.53
MCF2L-203ENST00000375604 RPL37AP61513 92 aaKnown RBP11.75□□□□□ -0.53
MCF2L-203ENST00000375604 SPATA3Q8NHX4 192 aa11.75□□□□□ -0.53
MCF2L-203ENST00000375604 LIMD2Q9BT23 127 aa11.75□□□□□ -0.53
MCF2L-203ENST00000375604 IGHV3OR16-9A0A0B4J2B5 98 aa11.75□□□□□ -0.53
MCF2L-203ENST00000375604 CACNA1AO00555 2505 aa11.74□□□□□ -0.53
MCF2L-203ENST00000375604 F8WDY8 70 aa11.74□□□□□ -0.53
MCF2L-203ENST00000375604 PCSK5Q92824 1860 aa11.73□□□□□ -0.53
MCF2L-203ENST00000375604 C16orf90A8MZG2 172 aa11.73□□□□□ -0.53
MCF2L-203ENST00000375604 C1orf64Q8NEQ6 169 aa11.73□□□□□ -0.53
MCF2L-203ENST00000375604 IGLV5-39A0A0G2JS06 123 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms