RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 KIF13BQ9NQT8 1826 aa4.59□□□□□ -1.67
UBR4-204ENST00000375254 IGKV2-24A0A0C4DH68 120 aa4.59□□□□□ -1.67
UBR4-204ENST00000375254 BBC3Q96PG8 261 aaPredicted RBP4.59□□□□□ -1.67
UBR4-204ENST00000375254 NUP98P52948 1817 aa4.59□□□□□ -1.67
UBR4-204ENST00000375254 SPINK1P00995 79 aa4.59□□□□□ -1.67
UBR4-204ENST00000375254 TMEM105Q8N8V8 129 aa4.59□□□□□ -1.67
UBR4-204ENST00000375254 TNRC6BQ9UPQ9 1833 aaKnown RBP4.59□□□□□ -1.67
UBR4-204ENST00000375254 MSMPQ1L6U9 139 aa4.59□□□□□ -1.67
UBR4-204ENST00000375254 DEFB136Q30KP8 78 aa4.59□□□□□ -1.67
UBR4-204ENST00000375254 PRLHP81277 87 aa4.59□□□□□ -1.67
UBR4-204ENST00000375254 IGLV4-60A0A075B6I1 120 aa4.59□□□□□ -1.68
UBR4-204ENST00000375254 PLA2G2AP14555 144 aa4.59□□□□□ -1.68
UBR4-204ENST00000375254 LINC01006Q8NI28 216 aa4.59□□□□□ -1.68
UBR4-204ENST00000375254 PAPPAQ13219 1627 aa4.59□□□□□ -1.68
UBR4-204ENST00000375254 LAMB2P55268 1798 aa4.59□□□□□ -1.68
UBR4-204ENST00000375254 TANC2Q9HCD6 1990 aa4.59□□□□□ -1.68
UBR4-204ENST00000375254 NYNRINQ9P2P1 1898 aaKnown RBP4.58□□□□□ -1.68
UBR4-204ENST00000375254 IGLV7-46A0A075B6I9 117 aa4.58□□□□□ -1.68
UBR4-204ENST00000375254 LOC285556D6RIA3 1793 aa4.58□□□□□ -1.68
UBR4-204ENST00000375254 COL11A1P12107 1806 aaPredicted RBP4.58□□□□□ -1.68
UBR4-204ENST00000375254 OCR1Q9BZK8 76 aa4.58□□□□□ -1.68
UBR4-204ENST00000375254 SPINK6Q6UWN8 80 aa4.57□□□□□ -1.68
UBR4-204ENST00000375254 A8MTW9 85 aa4.57□□□□□ -1.68
UBR4-204ENST00000375254 LINC01558Q9Y6Z2 57 aa4.57□□□□□ -1.68
UBR4-204ENST00000375254 LINC00313P59037 77 aa4.57□□□□□ -1.68
UBR4-204ENST00000375254 Q6ZSN1 163 aa4.57□□□□□ -1.68
UBR4-204ENST00000375254 COL24A1Q17RW2 1714 aa4.57□□□□□ -1.68
UBR4-204ENST00000375254 RPL37AP61513 92 aaKnown RBP4.57□□□□□ -1.68
UBR4-204ENST00000375254 C22orf24Q9Y442 160 aa4.57□□□□□ -1.68
UBR4-204ENST00000375254 PCDH15Q96QU1 1955 aa4.57□□□□□ -1.68
UBR4-204ENST00000375254 Q6ZRX8 168 aa4.57□□□□□ -1.68
UBR4-204ENST00000375254 MYLKQ15746 1914 aa4.56□□□□□ -1.68
UBR4-204ENST00000375254 FP248Q71RG6 208 aaPredicted RBP4.56□□□□□ -1.68
UBR4-204ENST00000375254 IGLV9-49A0A0B4J1Y8 123 aa4.56□□□□□ -1.68
UBR4-204ENST00000375254 FLG2Q5D862 2391 aaPredicted RBP4.56□□□□□ -1.68
UBR4-204ENST00000375254 DEFB135Q30KP9 77 aa4.56□□□□□ -1.68
UBR4-204ENST00000375254 Q6ZRP5 223 aa4.56□□□□□ -1.68
UBR4-204ENST00000375254 EPM2AB3EWF7 344 aa4.55□□□□□ -1.68
UBR4-204ENST00000375254 KLK9Q2XQG4 91 aa4.55□□□□□ -1.68
UBR4-204ENST00000375254 FAM104AQ969W3 186 aa4.54□□□□□ -1.68
UBR4-204ENST00000375254 KCNQ1DNQ9H478 68 aa4.54□□□□□ -1.68
UBR4-204ENST00000375254 TICRRQ7Z2Z1 1910 aa4.54□□□□□ -1.68
UBR4-204ENST00000375254 C1orf134Q5TEV5 83 aa4.54□□□□□ -1.68
UBR4-204ENST00000375254 X6R8D5 127 aa4.54□□□□□ -1.68
UBR4-204ENST00000375254 PAPPA2Q9BXP8 1791 aa4.54□□□□□ -1.68
UBR4-204ENST00000375254 C16orf90A8MZG2 172 aa4.53□□□□□ -1.68
UBR4-204ENST00000375254 DEFB113Q30KQ7 82 aa4.53□□□□□ -1.68
UBR4-204ENST00000375254 MRPL34Q9BQ48 92 aaKnown RBP4.53□□□□□ -1.68
UBR4-204ENST00000375254 PLXND1Q9Y4D7 1925 aa4.53□□□□□ -1.68
UBR4-204ENST00000375254 C11orf71Q6IPW1 123 aa4.53□□□□□ -1.68
UBR4-204ENST00000375254 PRO3102Q9H379 93 aa4.53□□□□□ -1.68
UBR4-204ENST00000375254 LINC00476Q8WZB0 136 aa4.53□□□□□ -1.68
UBR4-204ENST00000375254 DOCK2Q92608 1830 aa4.53□□□□□ -1.68
UBR4-204ENST00000375254 PLA2G2CQ5R387 149 aa4.53□□□□□ -1.68
UBR4-204ENST00000375254 Q8N9P0 234 aaPredicted RBP4.53□□□□□ -1.68
UBR4-204ENST00000375254 NHSQ6T4R5 1651 aa4.53□□□□□ -1.68
UBR4-204ENST00000375254 SEC61BP60468 96 aaKnown RBP4.52□□□□□ -1.69
UBR4-204ENST00000375254 CIRBP-AS1Q8TBR5 109 aa4.52□□□□□ -1.69
UBR4-204ENST00000375254 RGPD2P0DJD1 1756 aa4.52□□□□□ -1.69
UBR4-204ENST00000375254 H3BNG1 76 aa4.52□□□□□ -1.69
UBR4-204ENST00000375254 TAF1LQ8IZX4 1826 aa4.52□□□□□ -1.69
UBR4-204ENST00000375254 DEFB4AO15263 64 aa4.51□□□□□ -1.69
UBR4-204ENST00000375254 SIPA1L3O60292 1781 aaPredicted RBP4.51□□□□□ -1.69
UBR4-204ENST00000375254 IGKV2D-30A0A075B6S6 120 aa4.51□□□□□ -1.69
UBR4-204ENST00000375254 IGKV2-30P06310 120 aa4.51□□□□□ -1.69
UBR4-204ENST00000375254 CHTF8P0CG12 524 aa4.51□□□□□ -1.69
UBR4-204ENST00000375254 DLEC1Q9Y238 1755 aa4.5□□□□□ -1.69
UBR4-204ENST00000375254 RGPD5Q99666 1765 aa4.5□□□□□ -1.69
UBR4-204ENST00000375254 K7EQZ3 153 aa4.5□□□□□ -1.69
UBR4-204ENST00000375254 RGPD8O14715 1765 aaPredicted RBP4.5□□□□□ -1.69
UBR4-204ENST00000375254 DOT1LQ8TEK3 1739 aa4.49□□□□□ -1.69
UBR4-204ENST00000375254 LTN1O94822 1766 aa4.49□□□□□ -1.69
UBR4-204ENST00000375254 GREB1Q4ZG55 1949 aa4.49□□□□□ -1.69
UBR4-204ENST00000375254 TRPM7Q96QT4 1865 aa4.49□□□□□ -1.69
UBR4-204ENST00000375254 USP9XQ93008 2570 aaPredicted RBP4.49□□□□□ -1.69
UBR4-204ENST00000375254 IGLV8-61A0A075B6I0 122 aa4.49□□□□□ -1.69
UBR4-204ENST00000375254 FOCADQ5VW36 1801 aa4.48□□□□□ -1.69
UBR4-204ENST00000375254 CAMK2N1Q7Z7J9 78 aa4.48□□□□□ -1.69
UBR4-204ENST00000375254 Q5VV11 94 aa4.48□□□□□ -1.69
UBR4-204ENST00000375254 LRRC37AA6NMS7 1700 aa4.47□□□□□ -1.69
UBR4-204ENST00000375254 IGLV5-48A0A075B6I7 105 aa4.47□□□□□ -1.69
UBR4-204ENST00000375254 LINC01556Q5JQF7 62 aa4.47□□□□□ -1.69
UBR4-204ENST00000375254 LINC00528Q8N1L1 170 aa4.47□□□□□ -1.69
UBR4-204ENST00000375254 BDP1A6H8Y1 2624 aa4.47□□□□□ -1.69
UBR4-204ENST00000375254 PLA2G2DQ9UNK4 145 aa4.47□□□□□ -1.69
UBR4-204ENST00000375254 MUC6Q6W4X9 2439 aa4.47□□□□□ -1.69
UBR4-204ENST00000375254 PARP14Q460N5 1801 aa4.46□□□□□ -1.69
UBR4-204ENST00000375254 KIAA1549Q9HCM3 1950 aa4.46□□□□□ -1.7
UBR4-204ENST00000375254 NRAPQ86VF7 1730 aa4.46□□□□□ -1.7
UBR4-204ENST00000375254 KMT2EQ8IZD2 1858 aa4.46□□□□□ -1.7
UBR4-204ENST00000375254 PLA2G1BP04054 148 aaKnown RBP4.45□□□□□ -1.7
UBR4-204ENST00000375254 Q8N377 158 aa4.45□□□□□ -1.7
UBR4-204ENST00000375254 ZNF236Q9UL36 1845 aa4.45□□□□□ -1.7
UBR4-204ENST00000375254 C8orf17Q9NRJ1 99 aa4.45□□□□□ -1.7
UBR4-204ENST00000375254 MTORP42345 2549 aa4.45□□□□□ -1.7
UBR4-204ENST00000375254 Q8NAQ8 132 aa4.45□□□□□ -1.7
UBR4-204ENST00000375254 ODF3L2Q3SX64 289 aa4.44□□□□□ -1.7
UBR4-204ENST00000375254 TNP2Q05952 138 aa4.44□□□□□ -1.7
UBR4-204ENST00000375254 A0A1B0GVX0 72 aa4.44□□□□□ -1.7
UBR4-204ENST00000375254 IGLV1-51P01701 117 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms