RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 ICOSQ9Y6W8 199 aa5.84□□□□□ -1.47
UBR4-202ENST00000375224 INAFM2P0DMQ5 153 aa5.83□□□□□ -1.48
UBR4-202ENST00000375224 TSPEAR-AS2P59090 65 aa5.83□□□□□ -1.48
UBR4-202ENST00000375224 RBM3P98179 157 aaKnown RBP5.83□□□□□ -1.48
UBR4-202ENST00000375224 USP17L23D6RBM5 183 aa5.83□□□□□ -1.48
UBR4-202ENST00000375224 MRPL55Q7Z7F7 128 aaKnown RBP5.83□□□□□ -1.48
UBR4-202ENST00000375224 MUSTN1Q8IVN3 82 aa5.83□□□□□ -1.48
UBR4-202ENST00000375224 CLEC2BQ92478 149 aa5.83□□□□□ -1.48
UBR4-202ENST00000375224 IGHV1-58A0A0C4DH39 117 aa5.83□□□□□ -1.48
UBR4-202ENST00000375224 IGKV3D-7A0A0C4DH55 119 aa5.83□□□□□ -1.48
UBR4-202ENST00000375224 DNAL4O96015 105 aa5.83□□□□□ -1.48
UBR4-202ENST00000375224 HIST1H4AP62805 103 aaKnown RBP5.83□□□□□ -1.48
UBR4-202ENST00000375224 SMCR5Q8TEV8 140 aa5.83□□□□□ -1.48
UBR4-202ENST00000375224 UBE2L6O14933 153 aa5.82□□□□□ -1.48
UBR4-202ENST00000375224 C20orf197Q8N268 126 aa5.82□□□□□ -1.48
UBR4-202ENST00000375224 IGHV3-30-3P0DP02 117 aa5.82□□□□□ -1.48
UBR4-202ENST00000375224 C4orf48Q5BLP8 95 aa5.82□□□□□ -1.48
UBR4-202ENST00000375224 CD164Q04900 197 aa5.82□□□□□ -1.48
UBR4-202ENST00000375224 RNASE13Q5GAN3 156 aaKnown RBP5.82□□□□□ -1.48
UBR4-202ENST00000375224 FAM19A3Q7Z5A8 133 aa5.82□□□□□ -1.48
UBR4-202ENST00000375224 APOC4P55056 127 aa5.81□□□□□ -1.48
UBR4-202ENST00000375224 IGLV5-45A0A087WSX0 123 aa5.81□□□□□ -1.48
UBR4-202ENST00000375224 FHL2Q14192 279 aa5.81□□□□□ -1.48
UBR4-202ENST00000375224 LINC00612Q8N6U2 182 aa5.81□□□□□ -1.48
UBR4-202ENST00000375224 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.81□□□□□ -1.48
UBR4-202ENST00000375224 VSIG2Q96IQ7 327 aa5.81□□□□□ -1.48
UBR4-202ENST00000375224 UPK3BQ9BT76 320 aa5.81□□□□□ -1.48
UBR4-202ENST00000375224 IGHV3-64A0A075B6Q5 118 aa5.8□□□□□ -1.48
UBR4-202ENST00000375224 LST1O00453 97 aa5.8□□□□□ -1.48
UBR4-202ENST00000375224 NTM-AS1Q6ZSK4 140 aa5.8□□□□□ -1.48
UBR4-202ENST00000375224 TIMM17BO60830 172 aa5.8□□□□□ -1.48
UBR4-202ENST00000375224 FAM19A1Q7Z5A9 133 aa5.8□□□□□ -1.48
UBR4-202ENST00000375224 A0A0J9YXY3 114 aa5.79□□□□□ -1.48
UBR4-202ENST00000375224 LYRM9A8MSI8 78 aa5.79□□□□□ -1.48
UBR4-202ENST00000375224 WFDC9Q8NEX5 89 aa5.79□□□□□ -1.48
UBR4-202ENST00000375224 CDC42SE2Q9NRR3 84 aa5.79□□□□□ -1.48
UBR4-202ENST00000375224 NDUFA12Q9UI09 145 aa5.79□□□□□ -1.48
UBR4-202ENST00000375224 C2CD3Q4AC94 2353 aa5.79□□□□□ -1.48
UBR4-202ENST00000375224 GHRHP01286 108 aa5.79□□□□□ -1.48
UBR4-202ENST00000375224 NOTCH3Q9UM47 2321 aa5.79□□□□□ -1.48
UBR4-202ENST00000375224 DAND5Q8N907 189 aa5.79□□□□□ -1.48
UBR4-202ENST00000375224 X6R8D5 127 aa5.79□□□□□ -1.48
UBR4-202ENST00000375224 JMJD1CQ15652 2540 aa5.79□□□□□ -1.48
UBR4-202ENST00000375224 CUBNO60494 3623 aa5.78□□□□□ -1.48
UBR4-202ENST00000375224 DEFB130BP0DP73 79 aa5.78□□□□□ -1.48
UBR4-202ENST00000375224 DEFB130AP0DP74 79 aa5.78□□□□□ -1.48
UBR4-202ENST00000375224 S100A7L2Q5SY68 101 aa5.78□□□□□ -1.48
UBR4-202ENST00000375224 CDKN2A-AS1Q9UH64 79 aa5.78□□□□□ -1.48
UBR4-202ENST00000375224 LAMTOR3Q9UHA4 124 aa5.78□□□□□ -1.48
UBR4-202ENST00000375224 A0A087WVE0 104 aa5.78□□□□□ -1.48
UBR4-202ENST00000375224 LINC00242Q5T6M2 205 aa5.78□□□□□ -1.48
UBR4-202ENST00000375224 TRBV6-8A0A0A6YYG3 113 aa5.78□□□□□ -1.48
UBR4-202ENST00000375224 FN1P02751 2386 aaKnown RBP5.77□□□□□ -1.49
UBR4-202ENST00000375224 LOC100131303A0A0U1RQF7 123 aa5.77□□□□□ -1.49
UBR4-202ENST00000375224 MPLKIPQ8TAP9 179 aa5.77□□□□□ -1.49
UBR4-202ENST00000375224 BAALC-AS2P0C853 105 aa5.77□□□□□ -1.49
UBR4-202ENST00000375224 PRO0255Q9UI72 69 aa5.77□□□□□ -1.49
UBR4-202ENST00000375224 NSD1Q96L73 2696 aaPredicted RBP5.77□□□□□ -1.49
UBR4-202ENST00000375224 IGLV5-39A0A0G2JS06 123 aa5.76□□□□□ -1.49
UBR4-202ENST00000375224 NDUFA1O15239 70 aa5.76□□□□□ -1.49
UBR4-202ENST00000375224 XCL1P47992 114 aa5.76□□□□□ -1.49
UBR4-202ENST00000375224 SS18Q15532 418 aa5.76□□□□□ -1.49
UBR4-202ENST00000375224 COX6A2Q02221 97 aa5.76□□□□□ -1.49
UBR4-202ENST00000375224 MIFP14174 115 aa5.75□□□□□ -1.49
UBR4-202ENST00000375224 GYPEP15421 78 aa5.75□□□□□ -1.49
UBR4-202ENST00000375224 Q6JHZ5 121 aa5.75□□□□□ -1.49
UBR4-202ENST00000375224 OTOGQ6ZRI0 2925 aa5.75□□□□□ -1.49
UBR4-202ENST00000375224 MIAQ16674 131 aa5.75□□□□□ -1.49
UBR4-202ENST00000375224 DEFB135Q30KP9 77 aa5.75□□□□□ -1.49
UBR4-202ENST00000375224 FAM222AQ5U5X8 452 aa5.75□□□□□ -1.49
UBR4-202ENST00000375224 SPATA3Q8NHX4 192 aa5.75□□□□□ -1.49
UBR4-202ENST00000375224 FP248Q71RG6 208 aaPredicted RBP5.75□□□□□ -1.49
UBR4-202ENST00000375224 LITAFQ99732 161 aa5.75□□□□□ -1.49
UBR4-202ENST00000375224 TRAV23DV6A0A075B6W5 121 aa5.74□□□□□ -1.49
UBR4-202ENST00000375224 TRBV7-6A0A0J9YX20 115 aa5.74□□□□□ -1.49
UBR4-202ENST00000375224 SMIM1B2RUZ4 78 aa5.74□□□□□ -1.49
UBR4-202ENST00000375224 PAX4O43316 350 aa5.74□□□□□ -1.49
UBR4-202ENST00000375224 DAD1P61803 113 aa5.73□□□□□ -1.49
UBR4-202ENST00000375224 LINC00474Q9P2X8 69 aa5.73□□□□□ -1.49
UBR4-202ENST00000375224 MAST4O15021 2626 aa5.73□□□□□ -1.49
UBR4-202ENST00000375224 IGHV4-28A0A0C4DH34 117 aa5.73□□□□□ -1.49
UBR4-202ENST00000375224 A8MZ25 164 aa5.73□□□□□ -1.49
UBR4-202ENST00000375224 Q9H8V8 135 aa5.73□□□□□ -1.49
UBR4-202ENST00000375224 A0A1B0GUV1 79 aa5.72□□□□□ -1.49
UBR4-202ENST00000375224 EIF4EBP3O60516 100 aaPredicted RBP5.72□□□□□ -1.49
UBR4-202ENST00000375224 CCKP06307 115 aa5.72□□□□□ -1.49
UBR4-202ENST00000375224 HIVEP1P15822 2718 aa5.72□□□□□ -1.49
UBR4-202ENST00000375224 SPART-AS1P0CW21 52 aa5.72□□□□□ -1.49
UBR4-202ENST00000375224 IGHV4-30-4P0DP06 118 aa5.72□□□□□ -1.49
UBR4-202ENST00000375224 ADAMTSL4-AS1Q5T5F5 129 aa5.72□□□□□ -1.49
UBR4-202ENST00000375224 Q8NAQ8 132 aa5.71□□□□□ -1.49
UBR4-202ENST00000375224 TEP1Q99973 2627 aaKnown RBP5.71□□□□□ -1.5
UBR4-202ENST00000375224 IGLV4-60A0A075B6I1 120 aa5.71□□□□□ -1.5
UBR4-202ENST00000375224 EPM2AB3EWF7 344 aa5.71□□□□□ -1.5
UBR4-202ENST00000375224 ATP5EP56381 51 aaPredicted RBP5.71□□□□□ -1.5
UBR4-202ENST00000375224 ZNF625Q96I27 306 aaPredicted RBP5.71□□□□□ -1.5
UBR4-202ENST00000375224 COX7A2LO14548 114 aa5.7□□□□□ -1.5
UBR4-202ENST00000375224 SOSTDC1Q6X4U4 206 aa5.7□□□□□ -1.5
UBR4-202ENST00000375224 COX7B2Q8TF08 81 aa5.7□□□□□ -1.5
UBR4-202ENST00000375224 F8WEM9 126 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms