RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 AVPP01185 164 aa9.03□□□□□ -0.96
NPLOC4-202ENST00000374747 POLR2KP53803 58 aaKnown RBP9.03□□□□□ -0.96
NPLOC4-202ENST00000374747 KRTAP10-9P60411 292 aa9.03□□□□□ -0.96
NPLOC4-202ENST00000374747 PKD1L2Q7Z442 2459 aa9.03□□□□□ -0.96
NPLOC4-202ENST00000374747 Q6JHZ5 121 aa9.03□□□□□ -0.96
NPLOC4-202ENST00000374747 SYCNQ0VAF6 134 aa9.02□□□□□ -0.96
NPLOC4-202ENST00000374747 SMIM11BQ8TCY0 68 aa9.02□□□□□ -0.96
NPLOC4-202ENST00000374747 UBE2D4Q9Y2X8 147 aa9.02□□□□□ -0.96
NPLOC4-202ENST00000374747 A0A087WZ39 114 aa9.02□□□□□ -0.97
NPLOC4-202ENST00000374747 UTP20O75691 2785 aaKnown RBP9.02□□□□□ -0.97
NPLOC4-202ENST00000374747 HILS1P60008 231 aa9.02□□□□□ -0.97
NPLOC4-202ENST00000374747 MRPS36P82909 103 aaKnown RBP9.02□□□□□ -0.97
NPLOC4-202ENST00000374747 PRRC2AP48634 2157 aaKnown RBP9.02□□□□□ -0.97
NPLOC4-202ENST00000374747 FAM19A5Q7Z5A7 132 aaPredicted RBP9.02□□□□□ -0.97
NPLOC4-202ENST00000374747 C11orf21Q9P2W6 132 aa9.02□□□□□ -0.97
NPLOC4-202ENST00000374747 CD164L2Q6UWJ8 174 aa9.01□□□□□ -0.97
NPLOC4-202ENST00000374747 A6NED7 52 aa9.01□□□□□ -0.97
NPLOC4-202ENST00000374747 LINC01006Q8NI28 216 aa9.01□□□□□ -0.97
NPLOC4-202ENST00000374747 PRR9Q5T870 116 aa9□□□□□ -0.97
NPLOC4-202ENST00000374747 DHRS4-AS1Q9P1J3 65 aa9□□□□□ -0.97
NPLOC4-202ENST00000374747 DEFB131BA0A096LNP1 70 aa9□□□□□ -0.97
NPLOC4-202ENST00000374747 KLLNB2CW77 178 aa9□□□□□ -0.97
NPLOC4-202ENST00000374747 M0R378 163 aa9□□□□□ -0.97
NPLOC4-202ENST00000374747 UBE2D1P51668 147 aa9□□□□□ -0.97
NPLOC4-202ENST00000374747 WFDC13Q8IUB5 93 aa8.99□□□□□ -0.97
NPLOC4-202ENST00000374747 CNFNQ9BYD5 112 aa8.99□□□□□ -0.97
NPLOC4-202ENST00000374747 GAS8-AS1O95177 125 aa8.99□□□□□ -0.97
NPLOC4-202ENST00000374747 MIFP14174 115 aa8.99□□□□□ -0.97
NPLOC4-202ENST00000374747 CRIP2P52943 208 aaPredicted RBP8.99□□□□□ -0.97
NPLOC4-202ENST00000374747 C9orf85Q96MD7 179 aa8.99□□□□□ -0.97
NPLOC4-202ENST00000374747 SMIM26A0A096LP01 95 aa8.98□□□□□ -0.97
NPLOC4-202ENST00000374747 LINC00694P0DN24 101 aa8.98□□□□□ -0.97
NPLOC4-202ENST00000374747 IGKV2-28A0A075B6P5 120 aa8.98□□□□□ -0.97
NPLOC4-202ENST00000374747 IGKV2D-28P01615 120 aa8.98□□□□□ -0.97
NPLOC4-202ENST00000374747 C1orf195Q5TG92 126 aa8.98□□□□□ -0.97
NPLOC4-202ENST00000374747 A0A0J9YWU9 116 aa8.98□□□□□ -0.97
NPLOC4-202ENST00000374747 LINC00959A0A1B0GUT2 108 aa8.97□□□□□ -0.97
NPLOC4-202ENST00000374747 PRR4Q16378 134 aa8.97□□□□□ -0.97
NPLOC4-202ENST00000374747 Q8N9L7 120 aa8.97□□□□□ -0.97
NPLOC4-202ENST00000374747 IL17DQ8TAD2 202 aa8.97□□□□□ -0.97
NPLOC4-202ENST00000374747 POM121L12Q8N7R1 296 aa8.97□□□□□ -0.97
NPLOC4-202ENST00000374747 BBC3Q96PG8 261 aaPredicted RBP8.97□□□□□ -0.97
NPLOC4-202ENST00000374747 COX17Q14061 63 aa8.97□□□□□ -0.97
NPLOC4-202ENST00000374747 SHISA2Q6UWI4 295 aa8.97□□□□□ -0.97
NPLOC4-202ENST00000374747 RAI1Q7Z5J4 1906 aaPredicted RBP8.97□□□□□ -0.97
NPLOC4-202ENST00000374747 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.96□□□□□ -0.97
NPLOC4-202ENST00000374747 EPG5Q9HCE0 2579 aa8.96□□□□□ -0.97
NPLOC4-202ENST00000374747 ABCA2Q9BZC7 2435 aa8.96□□□□□ -0.97
NPLOC4-202ENST00000374747 JMJD1CQ15652 2540 aa8.96□□□□□ -0.97
NPLOC4-202ENST00000374747 NF1P21359 2839 aa8.96□□□□□ -0.98
NPLOC4-202ENST00000374747 IGIPA6NJ69 53 aa8.96□□□□□ -0.98
NPLOC4-202ENST00000374747 CLUHP3Q96NS8 147 aa8.96□□□□□ -0.98
NPLOC4-202ENST00000374747 ZNF73O43830 326 aaPredicted RBP8.95□□□□□ -0.98
NPLOC4-202ENST00000374747 MUC7Q8TAX7 377 aa8.95□□□□□ -0.98
NPLOC4-202ENST00000374747 ZNF580Q9UK33 172 aa8.95□□□□□ -0.98
NPLOC4-202ENST00000374747 BRI3O95415 125 aa8.95□□□□□ -0.98
NPLOC4-202ENST00000374747 URB1-AS1Q96HZ7 61 aa8.95□□□□□ -0.98
NPLOC4-202ENST00000374747 TRAV7A0A075B6U4 112 aa8.94□□□□□ -0.98
NPLOC4-202ENST00000374747 Q8IZM0 81 aa8.94□□□□□ -0.98
NPLOC4-202ENST00000374747 MTORP42345 2549 aa8.94□□□□□ -0.98
NPLOC4-202ENST00000374747 NTM-AS1Q6ZSK4 140 aa8.94□□□□□ -0.98
NPLOC4-202ENST00000374747 LINC00526Q96FQ7 95 aa8.94□□□□□ -0.98
NPLOC4-202ENST00000374747 IGLV4-69A0A075B6H9 119 aa8.94□□□□□ -0.98
NPLOC4-202ENST00000374747 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.94□□□□□ -0.98
NPLOC4-202ENST00000374747 LINC00482Q8N8I6 264 aa8.94□□□□□ -0.98
NPLOC4-202ENST00000374747 M0QXV9 152 aa8.93□□□□□ -0.98
NPLOC4-202ENST00000374747 SERP1Q9Y6X1 66 aa8.93□□□□□ -0.98
NPLOC4-202ENST00000374747 HRCT1Q6UXD1 115 aa8.93□□□□□ -0.98
NPLOC4-202ENST00000374747 LOC100131303A0A0U1RQF7 123 aa8.93□□□□□ -0.98
NPLOC4-202ENST00000374747 LRCOL1A6NCL2 159 aa8.93□□□□□ -0.98
NPLOC4-202ENST00000374747 FAM30AQ9NZY2 134 aa8.93□□□□□ -0.98
NPLOC4-202ENST00000374747 LELP1Q5T871 98 aa8.92□□□□□ -0.98
NPLOC4-202ENST00000374747 CDC42SE2Q9NRR3 84 aa8.92□□□□□ -0.98
NPLOC4-202ENST00000374747 C18orf65Q6ZTR6 163 aa8.92□□□□□ -0.98
NPLOC4-202ENST00000374747 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.92□□□□□ -0.98
NPLOC4-202ENST00000374747 MRGPRG-AS1Q2M3A8 158 aa8.92□□□□□ -0.98
NPLOC4-202ENST00000374747 PPDPFQ9H3Y8 114 aa8.92□□□□□ -0.98
NPLOC4-202ENST00000374747 UBE2D3P61077 147 aa8.91□□□□□ -0.98
NPLOC4-202ENST00000374747 UBE2D2P62837 147 aa8.91□□□□□ -0.98
NPLOC4-202ENST00000374747 ZNF706Q9Y5V0 76 aaPredicted RBP8.91□□□□□ -0.98
NPLOC4-202ENST00000374747 SPINK6Q6UWN8 80 aa8.9□□□□□ -0.98
NPLOC4-202ENST00000374747 LINC00242Q5T6M2 205 aa8.9□□□□□ -0.98
NPLOC4-202ENST00000374747 MXRA5Q9NR99 2828 aa8.9□□□□□ -0.98
NPLOC4-202ENST00000374747 ZNF462Q96JM2 2506 aa8.9□□□□□ -0.99
NPLOC4-202ENST00000374747 RPL28P46779 137 aaKnown RBP8.89□□□□□ -0.99
NPLOC4-202ENST00000374747 NIPBLQ6KC79 2804 aaeCLIP8.89□□□□□ -0.99
NPLOC4-202ENST00000374747 CELA1Q9UNI1 258 aa8.89□□□□□ -0.99
NPLOC4-202ENST00000374747 A0A087WVE0 104 aa8.88□□□□□ -0.99
NPLOC4-202ENST00000374747 FBN2P35556 2912 aa8.88□□□□□ -0.99
NPLOC4-202ENST00000374747 TRAV10A0A0B4J240 114 aa8.88□□□□□ -0.99
NPLOC4-202ENST00000374747 LOC107984640A0A0U1RRK4 108 aa8.88□□□□□ -0.99
NPLOC4-202ENST00000374747 RPL37AP8A6NKH3 93 aa8.88□□□□□ -0.99
NPLOC4-202ENST00000374747 KPRPQ5T749 579 aaPredicted RBP8.88□□□□□ -0.99
NPLOC4-202ENST00000374747 Q8N814 137 aa8.88□□□□□ -0.99
NPLOC4-202ENST00000374747 SMIM1B2RUZ4 78 aa8.88□□□□□ -0.99
NPLOC4-202ENST00000374747 PRM2P04554 102 aa8.88□□□□□ -0.99
NPLOC4-202ENST00000374747 VPS13CQ709C8 3753 aa8.88□□□□□ -0.99
NPLOC4-202ENST00000374747 CYSRT1A8MQ03 144 aa8.87□□□□□ -0.99
NPLOC4-202ENST00000374747 C7orf33Q8WU49 177 aa8.87□□□□□ -0.99
NPLOC4-202ENST00000374747 SMR3AQ99954 134 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms