RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 FAM30AQ9NZY2 134 aa9.64□□□□□ -0.87
HSPG2-201ENST00000374673 TRBV30A0A0K0K1B3 111 aa9.63□□□□□ -0.87
HSPG2-201ENST00000374673 DPM2O94777 84 aa9.63□□□□□ -0.87
HSPG2-201ENST00000374673 C3orf79P0CE67 100 aa9.63□□□□□ -0.87
HSPG2-201ENST00000374673 PET117Q6UWS5 81 aa9.63□□□□□ -0.87
HSPG2-201ENST00000374673 C2orf82Q6UX34 121 aa9.63□□□□□ -0.87
HSPG2-201ENST00000374673 C6orf48Q9UBA6 75 aa9.63□□□□□ -0.87
HSPG2-201ENST00000374673 IGKCP01834 107 aa9.62□□□□□ -0.87
HSPG2-201ENST00000374673 CKS1BP61024 79 aa9.62□□□□□ -0.87
HSPG2-201ENST00000374673 LINC01545Q5VT33 79 aa9.62□□□□□ -0.87
HSPG2-201ENST00000374673 PMCHL2Q9BQD1 86 aa9.62□□□□□ -0.87
HSPG2-201ENST00000374673 DNAH8Q96JB1 4490 aa9.61□□□□□ -0.87
HSPG2-201ENST00000374673 LOC107984640A0A0U1RRK4 108 aa9.61□□□□□ -0.87
HSPG2-201ENST00000374673 S100A2P29034 98 aa9.61□□□□□ -0.87
HSPG2-201ENST00000374673 XGP55808 180 aa9.61□□□□□ -0.87
HSPG2-201ENST00000374673 CIRBPQ14011 172 aaKnown RBP9.61□□□□□ -0.87
HSPG2-201ENST00000374673 C5orf52A6NGY3 159 aa9.6□□□□□ -0.87
HSPG2-201ENST00000374673 TLX1NBP0CAT3 122 aa9.6□□□□□ -0.87
HSPG2-201ENST00000374673 KRTDAPP60985 99 aa9.6□□□□□ -0.87
HSPG2-201ENST00000374673 SNRPEP62304 92 aaKnown RBP9.6□□□□□ -0.87
HSPG2-201ENST00000374673 HIST1H2BLQ99880 126 aa9.6□□□□□ -0.87
HSPG2-201ENST00000374673 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.6□□□□□ -0.87
HSPG2-201ENST00000374673 APOBP04114 4563 aaKnown RBP9.58□□□□□ -0.88
HSPG2-201ENST00000374673 A0A096LNI7 61 aa9.58□□□□□ -0.88
HSPG2-201ENST00000374673 PANO1I0J062 215 aa9.58□□□□□ -0.88
HSPG2-201ENST00000374673 SPACA4Q8TDM5 124 aa9.58□□□□□ -0.88
HSPG2-201ENST00000374673 CHTF8P0CG12 524 aa9.57□□□□□ -0.88
HSPG2-201ENST00000374673 PTTG1IPP53801 180 aa9.57□□□□□ -0.88
HSPG2-201ENST00000374673 SFTA2Q6UW10 78 aa9.57□□□□□ -0.88
HSPG2-201ENST00000374673 SCXQ7RTU7 201 aa9.57□□□□□ -0.88
HSPG2-201ENST00000374673 LINC00474Q9P2X8 69 aa9.57□□□□□ -0.88
HSPG2-201ENST00000374673 IGKV2-24A0A0C4DH68 120 aa9.56□□□□□ -0.88
HSPG2-201ENST00000374673 C20orf202A1L168 122 aa9.56□□□□□ -0.88
HSPG2-201ENST00000374673 HERVK_113P61574 105 aa9.56□□□□□ -0.88
HSPG2-201ENST00000374673 RPL18AQ02543 176 aaKnown RBP9.56□□□□□ -0.88
HSPG2-201ENST00000374673 C9orf116Q5BN46 136 aaPredicted RBP9.56□□□□□ -0.88
HSPG2-201ENST00000374673 RYR1P21817 5038 aa9.56□□□□□ -0.88
HSPG2-201ENST00000374673 KIAA1109Q2LD37 5005 aa9.55□□□□□ -0.88
HSPG2-201ENST00000374673 NDUFC2-KCTD14E9PQ53 114 aa9.55□□□□□ -0.88
HSPG2-201ENST00000374673 HAMPP81172 84 aa9.55□□□□□ -0.88
HSPG2-201ENST00000374673 GAGE2BQ13066 116 aa9.55□□□□□ -0.88
HSPG2-201ENST00000374673 Q6ZRP5 223 aa9.55□□□□□ -0.88
HSPG2-201ENST00000374673 CIRBP-AS1Q8TBR5 109 aa9.55□□□□□ -0.88
HSPG2-201ENST00000374673 LEPROTO15243 131 aa9.54□□□□□ -0.88
HSPG2-201ENST00000374673 MAJINQ3KP22 176 aa9.54□□□□□ -0.88
HSPG2-201ENST00000374673 ZNF625Q96I27 306 aaPredicted RBP9.54□□□□□ -0.88
HSPG2-201ENST00000374673 AKR1D1P51857 326 aa9.53□□□□□ -0.88
HSPG2-201ENST00000374673 PLEKHB2Q96CS7 222 aa9.53□□□□□ -0.88
HSPG2-201ENST00000374673 A0A087WYN8 130 aa9.52□□□□□ -0.89
HSPG2-201ENST00000374673 E9PLD3 99 aa9.52□□□□□ -0.89
HSPG2-201ENST00000374673 PLAC8Q9NZF1 115 aa9.52□□□□□ -0.89
HSPG2-201ENST00000374673 TSPEAR-AS2P59090 65 aa9.51□□□□□ -0.89
HSPG2-201ENST00000374673 GAGE2EQ4V326 116 aa9.51□□□□□ -0.89
HSPG2-201ENST00000374673 STPG4Q8N801 248 aa9.51□□□□□ -0.89
HSPG2-201ENST00000374673 DPH3Q96FX2 82 aa9.51□□□□□ -0.89
HSPG2-201ENST00000374673 GAGE2DQ9UEU5 116 aa9.51□□□□□ -0.89
HSPG2-201ENST00000374673 J3QQQ9 107 aa9.5□□□□□ -0.89
HSPG2-201ENST00000374673 NDUFA12Q9UI09 145 aa9.5□□□□□ -0.89
HSPG2-201ENST00000374673 ERG28Q9UKR5 140 aa9.5□□□□□ -0.89
HSPG2-201ENST00000374673 EPM2AB3EWF7 344 aa9.49□□□□□ -0.89
HSPG2-201ENST00000374673 HERV-K104P63124 156 aa9.49□□□□□ -0.89
HSPG2-201ENST00000374673 COX17Q14061 63 aa9.49□□□□□ -0.89
HSPG2-201ENST00000374673 HSPG2P98160 4391 aa9.49□□□□□ -0.89
HSPG2-201ENST00000374673 MYMXA0A1B0GTQ4 84 aa9.48□□□□□ -0.89
HSPG2-201ENST00000374673 LGALS3P17931 250 aaKnown RBP9.48□□□□□ -0.89
HSPG2-201ENST00000374673 NMUP48645 174 aa9.48□□□□□ -0.89
HSPG2-201ENST00000374673 C9orf129Q5T035 196 aaKnown RBP9.48□□□□□ -0.89
HSPG2-201ENST00000374673 TMA7Q9Y2S6 64 aaKnown RBP9.48□□□□□ -0.89
HSPG2-201ENST00000374673 SMR3BP02814 79 aaPredicted RBP9.47□□□□□ -0.89
HSPG2-201ENST00000374673 PFN2P35080 140 aa9.47□□□□□ -0.89
HSPG2-201ENST00000374673 ATOH7Q8N100 152 aa9.47□□□□□ -0.89
HSPG2-201ENST00000374673 Q8N1X5 172 aa9.47□□□□□ -0.89
HSPG2-201ENST00000374673 A0A1W2PNN7 141 aa9.46□□□□□ -0.9
HSPG2-201ENST00000374673 KRTAP17-1Q9BYP8 105 aa9.45□□□□□ -0.9
HSPG2-201ENST00000374673 XAGE1AQ9HD64 81 aa9.45□□□□□ -0.9
HSPG2-201ENST00000374673 HERC2O95714 4834 aa9.45□□□□□ -0.9
HSPG2-201ENST00000374673 IGKV2D-26A0A0A0MRZ7 120 aa9.44□□□□□ -0.9
HSPG2-201ENST00000374673 LINC00587B1AMM8 73 aa9.44□□□□□ -0.9
HSPG2-201ENST00000374673 ANKRD39Q53RE8 183 aa9.44□□□□□ -0.9
HSPG2-201ENST00000374673 MEIG1Q5JSS6 88 aa9.44□□□□□ -0.9
HSPG2-201ENST00000374673 LINC00528Q8N1L1 170 aa9.44□□□□□ -0.9
HSPG2-201ENST00000374673 FAM168BA1KXE4 195 aa9.43□□□□□ -0.9
HSPG2-201ENST00000374673 SCGB1D1O95968 90 aa9.42□□□□□ -0.9
HSPG2-201ENST00000374673 SMIM13P0DJ93 91 aa9.42□□□□□ -0.9
HSPG2-201ENST00000374673 LINC00158P58513 81 aa9.42□□□□□ -0.9
HSPG2-201ENST00000374673 KRTAP7-1Q8IUC3 87 aa9.42□□□□□ -0.9
HSPG2-201ENST00000374673 FAM229AH3BQW9 127 aa9.41□□□□□ -0.9
HSPG2-201ENST00000374673 Q5VSD8 79 aa9.41□□□□□ -0.9
HSPG2-201ENST00000374673 FAM19A5Q7Z5A7 132 aaPredicted RBP9.41□□□□□ -0.9
HSPG2-201ENST00000374673 SND1-IT1Q9HBX3 110 aa9.41□□□□□ -0.9
HSPG2-201ENST00000374673 PLA2G2DQ9UNK4 145 aa9.41□□□□□ -0.9
HSPG2-201ENST00000374673 A0A0J9YXY3 114 aa9.4□□□□□ -0.9
HSPG2-201ENST00000374673 A0A0U1RRA0 63 aa9.4□□□□□ -0.9
HSPG2-201ENST00000374673 C7orf33Q8WU49 177 aa9.4□□□□□ -0.9
HSPG2-201ENST00000374673 ZNF815PA8K554 130 aa9.39□□□□□ -0.91
HSPG2-201ENST00000374673 HSBP1L1C9JCN9 74 aa9.39□□□□□ -0.91
HSPG2-201ENST00000374673 JOSD1Q15040 202 aaPredicted RBP9.39□□□□□ -0.91
HSPG2-201ENST00000374673 SERTAD4-AS1Q5TG53 156 aa9.39□□□□□ -0.91
HSPG2-201ENST00000374673 MIR7-3HGQ8N6C7 128 aa9.39□□□□□ -0.91
HSPG2-201ENST00000374673 TTTY13Q9BZ97 58 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms