RNA–Protein interactions for RNA: ENST00000373463.7

TMEM54-202, Transcript of transmembrane protein 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM54, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-202ENST00000373463 TOMM7Q9P0U1 55 aa13.26□□□□□ -0.29
TMEM54-202ENST00000373463 DMBT1Q9UGM3 2413 aaPredicted RBP13.26□□□□□ -0.29
TMEM54-202ENST00000373463 TRBV30A0A0K0K1B3 111 aa13.25□□□□□ -0.29
TMEM54-202ENST00000373463 RAB5BP61020 215 aa13.24□□□□□ -0.29
TMEM54-202ENST00000373463 C7orf33Q8WU49 177 aa13.24□□□□□ -0.29
TMEM54-202ENST00000373463 KRTAP29-1A8MX34 341 aaPredicted RBP13.23□□□□□ -0.29
TMEM54-202ENST00000373463 TRGC2P03986 189 aa13.23□□□□□ -0.29
TMEM54-202ENST00000373463 FAM168BA1KXE4 195 aa13.22□□□□□ -0.29
TMEM54-202ENST00000373463 PRR3P79522 188 aaKnown RBP13.22□□□□□ -0.29
TMEM54-202ENST00000373463 KRTAP7-1Q8IUC3 87 aa13.22□□□□□ -0.29
TMEM54-202ENST00000373463 PACRGQ96M98 296 aaPredicted RBP13.22□□□□□ -0.29
TMEM54-202ENST00000373463 FAT3Q8TDW7 4589 aa13.22□□□□□ -0.29
TMEM54-202ENST00000373463 HERC1Q15751 4861 aa13.21□□□□□ -0.29
TMEM54-202ENST00000373463 COLCA2A8K830 154 aa13.21□□□□□ -0.29
TMEM54-202ENST00000373463 PRSS2P07478 247 aa13.21□□□□□ -0.29
TMEM54-202ENST00000373463 IGLC3P0DOY3 106 aa13.21□□□□□ -0.29
TMEM54-202ENST00000373463 C6orf226Q5I0X4 101 aa13.21□□□□□ -0.29
TMEM54-202ENST00000373463 SPINK8P0C7L1 97 aa13.2□□□□□ -0.3
TMEM54-202ENST00000373463 GAGE2EQ4V326 116 aa13.2□□□□□ -0.3
TMEM54-202ENST00000373463 CHCHD1Q96BP2 118 aaKnown RBP13.2□□□□□ -0.3
TMEM54-202ENST00000373463 GAGE2DQ9UEU5 116 aa13.2□□□□□ -0.3
TMEM54-202ENST00000373463 NDUFC2-KCTD14E9PQ53 114 aa13.19□□□□□ -0.3
TMEM54-202ENST00000373463 LINC00310P59036 64 aa13.19□□□□□ -0.3
TMEM54-202ENST00000373463 CKS1BP61024 79 aa13.19□□□□□ -0.3
TMEM54-202ENST00000373463 ATP5LO75964 103 aa13.18□□□□□ -0.3
TMEM54-202ENST00000373463 NDUFA6P56556 154 aa13.18□□□□□ -0.3
TMEM54-202ENST00000373463 C9orf129Q5T035 196 aaKnown RBP13.18□□□□□ -0.3
TMEM54-202ENST00000373463 PHF5AQ7RTV0 110 aaKnown RBP13.18□□□□□ -0.3
TMEM54-202ENST00000373463 ZNF22P17026 224 aaPredicted RBP13.17□□□□□ -0.3
TMEM54-202ENST00000373463 COX7B2Q8TF08 81 aa13.17□□□□□ -0.3
TMEM54-202ENST00000373463 F8VRH5 84 aa13.16□□□□□ -0.3
TMEM54-202ENST00000373463 C11orf86A6NJI1 115 aa13.15□□□□□ -0.3
TMEM54-202ENST00000373463 SCO1O75880 301 aa13.15□□□□□ -0.3
TMEM54-202ENST00000373463 BAGE3Q86Y29 109 aa13.15□□□□□ -0.3
TMEM54-202ENST00000373463 KRTAP11-1Q8IUC1 163 aa13.15□□□□□ -0.3
TMEM54-202ENST00000373463 FAM19A2Q8N3H0 131 aa13.15□□□□□ -0.3
TMEM54-202ENST00000373463 IGLV5-39A0A0G2JS06 123 aa13.14□□□□□ -0.31
TMEM54-202ENST00000373463 CXCL5P42830 114 aa13.14□□□□□ -0.31
TMEM54-202ENST00000373463 J3QL48 77 aa13.13□□□□□ -0.31
TMEM54-202ENST00000373463 OXTP01178 125 aa13.13□□□□□ -0.31
TMEM54-202ENST00000373463 FAM19A5Q7Z5A7 132 aaPredicted RBP13.13□□□□□ -0.31
TMEM54-202ENST00000373463 H3BRM9 83 aa13.11□□□□□ -0.31
TMEM54-202ENST00000373463 NUPR1O60356 82 aa13.11□□□□□ -0.31
TMEM54-202ENST00000373463 HSBP1O75506 76 aa13.11□□□□□ -0.31
TMEM54-202ENST00000373463 SERF1AO75920 110 aa13.11□□□□□ -0.31
TMEM54-202ENST00000373463 IFI27L1Q96BM0 104 aa13.11□□□□□ -0.31
TMEM54-202ENST00000373463 PSORS1C2Q9UIG4 136 aa13.11□□□□□ -0.31
TMEM54-202ENST00000373463 XAGE1AQ9HD64 81 aa13.1□□□□□ -0.31
TMEM54-202ENST00000373463 SRSF9Q13242 221 aaKnown RBP eCLIP13.09□□□□□ -0.31
TMEM54-202ENST00000373463 SERTAD4-AS1Q5TG53 156 aa13.09□□□□□ -0.31
TMEM54-202ENST00000373463 CHTOPQ9Y3Y2 248 aaKnown RBP13.09□□□□□ -0.31
TMEM54-202ENST00000373463 TRAV12-1A0A0B4J245 112 aa13.08□□□□□ -0.32
TMEM54-202ENST00000373463 MT1HL1P0DM35 61 aa13.07□□□□□ -0.32
TMEM54-202ENST00000373463 M0QXV9 152 aa13.06□□□□□ -0.32
TMEM54-202ENST00000373463 TMEM170BQ5T4T1 132 aa13.06□□□□□ -0.32
TMEM54-202ENST00000373463 ODF1Q14990 250 aa13.02□□□□□ -0.33
TMEM54-202ENST00000373463 SPINK6Q6UWN8 80 aa13.02□□□□□ -0.33
TMEM54-202ENST00000373463 TMEM223A0PJW6 202 aa13.01□□□□□ -0.33
TMEM54-202ENST00000373463 LEPROTL1O95214 131 aa13.01□□□□□ -0.33
TMEM54-202ENST00000373463 C1orf137Q5JT78 98 aa13.01□□□□□ -0.33
TMEM54-202ENST00000373463 ZNF625Q96I27 306 aaPredicted RBP13□□□□□ -0.33
TMEM54-202ENST00000373463 C22orf24Q9Y442 160 aa13□□□□□ -0.33
TMEM54-202ENST00000373463 HIST1H2BKO60814 126 aa12.99□□□□□ -0.33
TMEM54-202ENST00000373463 HIST1H2BJP06899 126 aa12.99□□□□□ -0.33
TMEM54-202ENST00000373463 HIST1H2BOP23527 126 aa12.99□□□□□ -0.33
TMEM54-202ENST00000373463 HIST1H2BBP33778 126 aa12.99□□□□□ -0.33
TMEM54-202ENST00000373463 HIST1H2BDP58876 126 aa12.99□□□□□ -0.33
TMEM54-202ENST00000373463 HIST1H2BCP62807 126 aa12.99□□□□□ -0.33
TMEM54-202ENST00000373463 HIST2H2BEQ16778 126 aa12.99□□□□□ -0.33
TMEM54-202ENST00000373463 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.99□□□□□ -0.33
TMEM54-202ENST00000373463 HIST1H2BHQ93079 126 aa12.99□□□□□ -0.33
TMEM54-202ENST00000373463 HIST1H2BNQ99877 126 aa12.99□□□□□ -0.33
TMEM54-202ENST00000373463 HIST1H2BMQ99879 126 aa12.99□□□□□ -0.33
TMEM54-202ENST00000373463 H0Y8G0 127 aa12.97□□□□□ -0.33
TMEM54-202ENST00000373463 IGLV7-43P04211 117 aa12.97□□□□□ -0.33
TMEM54-202ENST00000373463 PFN2P35080 140 aa12.97□□□□□ -0.33
TMEM54-202ENST00000373463 FABP4P15090 132 aa12.96□□□□□ -0.33
TMEM54-202ENST00000373463 UBE2BP63146 152 aa12.96□□□□□ -0.33
TMEM54-202ENST00000373463 ERG28Q9UKR5 140 aa12.96□□□□□ -0.33
TMEM54-202ENST00000373463 PLA2G2DQ9UNK4 145 aa12.96□□□□□ -0.33
TMEM54-202ENST00000373463 LINC01600Q96MT4 127 aa12.95□□□□□ -0.34
TMEM54-202ENST00000373463 TP73-AS1Q9UF72 201 aa12.94□□□□□ -0.34
TMEM54-202ENST00000373463 HSPB8Q9UJY1 196 aa12.93□□□□□ -0.34
TMEM54-202ENST00000373463 IGLV5-37A0A075B6J1 123 aa12.92□□□□□ -0.34
TMEM54-202ENST00000373463 MRPL55Q7Z7F7 128 aaKnown RBP12.92□□□□□ -0.34
TMEM54-202ENST00000373463 SND1-IT1Q9HBX3 110 aa12.92□□□□□ -0.34
TMEM54-202ENST00000373463 Q8NDZ9 215 aa12.91□□□□□ -0.34
TMEM54-202ENST00000373463 PMCHL2Q9BQD1 86 aa12.91□□□□□ -0.34
TMEM54-202ENST00000373463 TNXBP22105 4242 aa12.91□□□□□ -0.34
TMEM54-202ENST00000373463 COX17Q14061 63 aa12.9□□□□□ -0.34
TMEM54-202ENST00000373463 LINC00167Q96N53 147 aa12.9□□□□□ -0.34
TMEM54-202ENST00000373463 TSPEAR-AS2P59090 65 aa12.89□□□□□ -0.35
TMEM54-202ENST00000373463 LBHQ53QV2 105 aaPredicted RBP12.89□□□□□ -0.35
TMEM54-202ENST00000373463 SFTA2Q6UW10 78 aa12.89□□□□□ -0.35
TMEM54-202ENST00000373463 REG3GQ6UW15 175 aa12.89□□□□□ -0.35
TMEM54-202ENST00000373463 GAGE10A6NGK3 116 aa12.87□□□□□ -0.35
TMEM54-202ENST00000373463 VPREB1P12018 145 aa12.87□□□□□ -0.35
TMEM54-202ENST00000373463 KRTAP10-8P60410 259 aa12.87□□□□□ -0.35
TMEM54-202ENST00000373463 RPL37AP8A6NKH3 93 aa12.86□□□□□ -0.35
TMEM54-202ENST00000373463 DPM2O94777 84 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms