RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 KIAA1644Q3SXP7 199 aa11.59□□□□□ -0.55
TMEM53-201ENST00000372235 M0QXV9 152 aa11.58□□□□□ -0.56
TMEM53-201ENST00000372235 FAM168BA1KXE4 195 aa11.57□□□□□ -0.56
TMEM53-201ENST00000372235 LINC01546A6NGU7 62 aa11.57□□□□□ -0.56
TMEM53-201ENST00000372235 F8VRH5 84 aa11.57□□□□□ -0.56
TMEM53-201ENST00000372235 ZC2HC1BQ5TFG8 222 aa11.57□□□□□ -0.56
TMEM53-201ENST00000372235 CDKN2A-AS1Q9UH64 79 aa11.57□□□□□ -0.56
TMEM53-201ENST00000372235 RHEBQ15382 184 aa11.56□□□□□ -0.56
TMEM53-201ENST00000372235 SMCO4Q9NRQ5 59 aa11.56□□□□□ -0.56
TMEM53-201ENST00000372235 TINCRA0A1B0GVN0 87 aa11.55□□□□□ -0.56
TMEM53-201ENST00000372235 IFITM2Q01629 132 aa11.55□□□□□ -0.56
TMEM53-201ENST00000372235 LBHQ53QV2 105 aaPredicted RBP11.55□□□□□ -0.56
TMEM53-201ENST00000372235 FA2HQ7L5A8 372 aa11.55□□□□□ -0.56
TMEM53-201ENST00000372235 LINC00469Q8N7U9 141 aa11.55□□□□□ -0.56
TMEM53-201ENST00000372235 PDZD11Q5EBL8 140 aa11.54□□□□□ -0.56
TMEM53-201ENST00000372235 COMMD7Q86VX2 200 aa11.54□□□□□ -0.56
TMEM53-201ENST00000372235 C9orf129Q5T035 196 aaKnown RBP11.53□□□□□ -0.56
TMEM53-201ENST00000372235 H0Y9J4 135 aa11.52□□□□□ -0.57
TMEM53-201ENST00000372235 FABP9Q0Z7S8 132 aa11.52□□□□□ -0.57
TMEM53-201ENST00000372235 MRPL18Q9H0U6 180 aaKnown RBP11.52□□□□□ -0.57
TMEM53-201ENST00000372235 IGLV5-45A0A087WSX0 123 aa11.51□□□□□ -0.57
TMEM53-201ENST00000372235 H3BRM9 83 aa11.51□□□□□ -0.57
TMEM53-201ENST00000372235 NUPR1O60356 82 aa11.51□□□□□ -0.57
TMEM53-201ENST00000372235 PMVKQ15126 192 aa11.51□□□□□ -0.57
TMEM53-201ENST00000372235 C10orf91Q5T1B1 145 aa11.51□□□□□ -0.57
TMEM53-201ENST00000372235 CST9LQ9H4G1 147 aa11.51□□□□□ -0.57
TMEM53-201ENST00000372235 RPS10P5Q9NQ39 176 aa11.51□□□□□ -0.57
TMEM53-201ENST00000372235 TP73-AS1Q9UF72 201 aa11.5□□□□□ -0.57
TMEM53-201ENST00000372235 CARHSP1Q9Y2V2 147 aaKnown RBP11.5□□□□□ -0.57
TMEM53-201ENST00000372235 TNXBP22105 4242 aa11.49□□□□□ -0.57
TMEM53-201ENST00000372235 SMIM1B2RUZ4 78 aa11.49□□□□□ -0.57
TMEM53-201ENST00000372235 COX7B2Q8TF08 81 aa11.49□□□□□ -0.57
TMEM53-201ENST00000372235 IGLV1-50A0A075B6I6 118 aa11.48□□□□□ -0.57
TMEM53-201ENST00000372235 KRTAP7-1Q8IUC3 87 aa11.48□□□□□ -0.57
TMEM53-201ENST00000372235 C22orf24Q9Y442 160 aa11.47□□□□□ -0.57
TMEM53-201ENST00000372235 RPL13AP40429 203 aaKnown RBP11.46□□□□□ -0.57
TMEM53-201ENST00000372235 XAGE1AQ9HD64 81 aa11.46□□□□□ -0.57
TMEM53-201ENST00000372235 RAB5BP61020 215 aa11.45□□□□□ -0.58
TMEM53-201ENST00000372235 NDUFA5Q16718 116 aa11.45□□□□□ -0.58
TMEM53-201ENST00000372235 KRTAP11-1Q8IUC1 163 aa11.45□□□□□ -0.58
TMEM53-201ENST00000372235 TRAPPC1Q9Y5R8 145 aa11.45□□□□□ -0.58
TMEM53-201ENST00000372235 ZNF861PO60384 105 aa11.44□□□□□ -0.58
TMEM53-201ENST00000372235 ATP5LO75964 103 aa11.44□□□□□ -0.58
TMEM53-201ENST00000372235 LINC00614P0C842 121 aa11.44□□□□□ -0.58
TMEM53-201ENST00000372235 MRPL55Q7Z7F7 128 aaKnown RBP11.44□□□□□ -0.58
TMEM53-201ENST00000372235 UBR4Q5T4S7 5183 aa11.42□□□□□ -0.58
TMEM53-201ENST00000372235 SNAPINO95295 136 aa11.42□□□□□ -0.58
TMEM53-201ENST00000372235 SFTA2Q6UW10 78 aa11.42□□□□□ -0.58
TMEM53-201ENST00000372235 HBDP02042 147 aa11.41□□□□□ -0.58
TMEM53-201ENST00000372235 SPINK8P0C7L1 97 aa11.41□□□□□ -0.58
TMEM53-201ENST00000372235 IGLC3P0DOY3 106 aa11.41□□□□□ -0.58
TMEM53-201ENST00000372235 SVBPQ8N300 66 aa11.41□□□□□ -0.58
TMEM53-201ENST00000372235 PRR26Q8N8Z3 221 aa11.41□□□□□ -0.58
TMEM53-201ENST00000372235 RPL28P46779 137 aaKnown RBP11.4□□□□□ -0.58
TMEM53-201ENST00000372235 NDUFA6P56556 154 aa11.4□□□□□ -0.58
TMEM53-201ENST00000372235 C18orf32Q8TCD1 76 aa11.39□□□□□ -0.59
TMEM53-201ENST00000372235 APOC3P02656 99 aa11.38□□□□□ -0.59
TMEM53-201ENST00000372235 NKAPP1Q8N9T2 125 aa11.38□□□□□ -0.59
TMEM53-201ENST00000372235 BCE1O60756 84 aa11.37□□□□□ -0.59
TMEM53-201ENST00000372235 KRTAP1-4P0C5Y4 121 aa11.37□□□□□ -0.59
TMEM53-201ENST00000372235 COX17Q14061 63 aa11.37□□□□□ -0.59
TMEM53-201ENST00000372235 IGLV5-37A0A075B6J1 123 aa11.36□□□□□ -0.59
TMEM53-201ENST00000372235 IGLV5-39A0A0G2JS06 123 aa11.35□□□□□ -0.59
TMEM53-201ENST00000372235 LINC00167Q96N53 147 aa11.35□□□□□ -0.59
TMEM53-201ENST00000372235 A0A096LNJ9 63 aa11.34□□□□□ -0.59
TMEM53-201ENST00000372235 ZNF22P17026 224 aaPredicted RBP11.33□□□□□ -0.6
TMEM53-201ENST00000372235 RPL24P83731 157 aaKnown RBP11.32□□□□□ -0.6
TMEM53-201ENST00000372235 BAGE3Q86Y29 109 aa11.32□□□□□ -0.6
TMEM53-201ENST00000372235 PFN2P35080 140 aa11.31□□□□□ -0.6
TMEM53-201ENST00000372235 TMEM170BQ5T4T1 132 aa11.31□□□□□ -0.6
TMEM53-201ENST00000372235 CHCHD1Q96BP2 118 aaKnown RBP11.31□□□□□ -0.6
TMEM53-201ENST00000372235 URB1-AS1Q96HZ7 61 aa11.31□□□□□ -0.6
TMEM53-201ENST00000372235 ERG28Q9UKR5 140 aa11.31□□□□□ -0.6
TMEM53-201ENST00000372235 RPL37AP8A6NKH3 93 aa11.3□□□□□ -0.6
TMEM53-201ENST00000372235 UBE2AP49459 152 aa11.29□□□□□ -0.6
TMEM53-201ENST00000372235 PMCHL1Q16048 86 aa11.28□□□□□ -0.6
TMEM53-201ENST00000372235 GAGE10A6NGK3 116 aa11.27□□□□□ -0.61
TMEM53-201ENST00000372235 CRYGAP11844 174 aa11.27□□□□□ -0.61
TMEM53-201ENST00000372235 CHTOPQ9Y3Y2 248 aaKnown RBP11.27□□□□□ -0.61
TMEM53-201ENST00000372235 LRP2P98164 4655 aa11.27□□□□□ -0.61
TMEM53-201ENST00000372235 TRAV12-1A0A0B4J245 112 aa11.26□□□□□ -0.61
TMEM53-201ENST00000372235 C11orf86A6NJI1 115 aa11.26□□□□□ -0.61
TMEM53-201ENST00000372235 SND1-IT1Q9HBX3 110 aa11.26□□□□□ -0.61
TMEM53-201ENST00000372235 IFI27L1Q96BM0 104 aa11.24□□□□□ -0.61
TMEM53-201ENST00000372235 LINC00587B1AMM8 73 aa11.23□□□□□ -0.61
TMEM53-201ENST00000372235 IGKV2-28A0A075B6P5 120 aa11.22□□□□□ -0.61
TMEM53-201ENST00000372235 IGKV2D-28P01615 120 aa11.22□□□□□ -0.61
TMEM53-201ENST00000372235 VPREB1P12018 145 aa11.22□□□□□ -0.61
TMEM53-201ENST00000372235 TYMSOSQ8TAI1 123 aa11.22□□□□□ -0.61
TMEM53-201ENST00000372235 ZNF625Q96I27 306 aaPredicted RBP11.22□□□□□ -0.61
TMEM53-201ENST00000372235 ATP6V1G1O75348 118 aa11.21□□□□□ -0.61
TMEM53-201ENST00000372235 HSBP1O75506 76 aa11.21□□□□□ -0.61
TMEM53-201ENST00000372235 FAM229BQ4G0N7 80 aa11.21□□□□□ -0.61
TMEM53-201ENST00000372235 KRTAP13-1Q8IUC0 172 aa11.21□□□□□ -0.61
TMEM53-201ENST00000372235 LINC00158P58513 81 aa11.2□□□□□ -0.62
TMEM53-201ENST00000372235 YPEL4Q96NS1 127 aa11.2□□□□□ -0.62
TMEM53-201ENST00000372235 TMEM223A0PJW6 202 aa11.19□□□□□ -0.62
TMEM53-201ENST00000372235 HERV-K104P63124 156 aa11.19□□□□□ -0.62
TMEM53-201ENST00000372235 TMEM126AQ9H061 195 aa11.19□□□□□ -0.62
TMEM53-201ENST00000372235 PRR4Q16378 134 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms