RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 LINC00242Q5T6M2 205 aa11.11□□□□□ -0.63
COL5A1-201ENST00000371817 ODF3BA8MYP8 253 aa11.11□□□□□ -0.63
COL5A1-201ENST00000371817 ACYP2P14621 99 aa11.11□□□□□ -0.63
COL5A1-201ENST00000371817 PRR3P79522 188 aaKnown RBP11.11□□□□□ -0.63
COL5A1-201ENST00000371817 ATP11AUNQ6ZP68 121 aa11.11□□□□□ -0.63
COL5A1-201ENST00000371817 PCSK5Q92824 1860 aa11.11□□□□□ -0.63
COL5A1-201ENST00000371817 URB1-AS1Q96HZ7 61 aa11.1□□□□□ -0.63
COL5A1-201ENST00000371817 SBSPONQ8IVN8 264 aa11.1□□□□□ -0.63
COL5A1-201ENST00000371817 BBC3Q96PG8 261 aaPredicted RBP11.1□□□□□ -0.63
COL5A1-201ENST00000371817 LINC01548A6NM66 108 aa11.09□□□□□ -0.63
COL5A1-201ENST00000371817 CIRBP-AS1Q8TBR5 109 aa11.09□□□□□ -0.63
COL5A1-201ENST00000371817 CD164Q04900 197 aa11.09□□□□□ -0.63
COL5A1-201ENST00000371817 MRGPRG-AS1Q2M3A8 158 aa11.09□□□□□ -0.63
COL5A1-201ENST00000371817 COL4A3Q01955 1670 aa11.09□□□□□ -0.63
COL5A1-201ENST00000371817 COX6A2Q02221 97 aa11.08□□□□□ -0.64
COL5A1-201ENST00000371817 MDFIQ99750 246 aa11.08□□□□□ -0.64
COL5A1-201ENST00000371817 PRR9Q5T870 116 aa11.08□□□□□ -0.64
COL5A1-201ENST00000371817 RETNLBQ9BQ08 111 aa11.08□□□□□ -0.64
COL5A1-201ENST00000371817 OXLD1Q5BKU9 147 aa11.07□□□□□ -0.64
COL5A1-201ENST00000371817 Q6ZTC4 211 aa11.07□□□□□ -0.64
COL5A1-201ENST00000371817 C9orf116Q5BN46 136 aaPredicted RBP11.06□□□□□ -0.64
COL5A1-201ENST00000371817 C11orf21Q9P2W6 132 aa11.06□□□□□ -0.64
COL5A1-201ENST00000371817 SMIM29Q86T20 159 aa11.06□□□□□ -0.64
COL5A1-201ENST00000371817 TP53AIP1Q9HCN2 124 aa11.06□□□□□ -0.64
COL5A1-201ENST00000371817 PRLHP81277 87 aa11.05□□□□□ -0.64
COL5A1-201ENST00000371817 C7orf65Q6ZTY9 151 aa11.05□□□□□ -0.64
COL5A1-201ENST00000371817 DEFB116Q30KQ4 102 aa11.05□□□□□ -0.64
COL5A1-201ENST00000371817 A0A087WSZ3 146 aa11.05□□□□□ -0.64
COL5A1-201ENST00000371817 KPRPQ5T749 579 aaPredicted RBP11.05□□□□□ -0.64
COL5A1-201ENST00000371817 IGFL2Q6UWQ7 119 aa11.05□□□□□ -0.64
COL5A1-201ENST00000371817 EGFEM1PQ0D2K5 195 aa11.04□□□□□ -0.64
COL5A1-201ENST00000371817 Q9BRP9 147 aa11.04□□□□□ -0.64
COL5A1-201ENST00000371817 COL27A1Q8IZC6 1860 aaPredicted RBP11.04□□□□□ -0.64
COL5A1-201ENST00000371817 UNQ6190/PRO20217Q6UXQ8 127 aa11.04□□□□□ -0.64
COL5A1-201ENST00000371817 FSTL3O95633 263 aa11.04□□□□□ -0.64
COL5A1-201ENST00000371817 DAZAP2Q15038 168 aaPredicted RBP11.04□□□□□ -0.64
COL5A1-201ENST00000371817 C1orf229Q6ZS94 237 aaPredicted RBP11.03□□□□□ -0.64
COL5A1-201ENST00000371817 NAV2Q8IVL1 2488 aa11.03□□□□□ -0.64
COL5A1-201ENST00000371817 AMELXQ99217 191 aa11.02□□□□□ -0.64
COL5A1-201ENST00000371817 F8WDY8 70 aa11.01□□□□□ -0.65
COL5A1-201ENST00000371817 C6orf48Q9UBA6 75 aa11.01□□□□□ -0.65
COL5A1-201ENST00000371817 CR1P17927 2039 aa11□□□□□ -0.65
COL5A1-201ENST00000371817 SPTBN4Q9H254 2564 aa11□□□□□ -0.65
COL5A1-201ENST00000371817 ZNF702PQ9H963 129 aa10.99□□□□□ -0.65
COL5A1-201ENST00000371817 PLA2G1BP04054 148 aaKnown RBP10.98□□□□□ -0.65
COL5A1-201ENST00000371817 CRIP3Q6Q6R5 217 aa10.98□□□□□ -0.65
COL5A1-201ENST00000371817 PSMG3-AS1Q96PY0 264 aa10.98□□□□□ -0.65
COL5A1-201ENST00000371817 MSMPQ1L6U9 139 aa10.98□□□□□ -0.65
COL5A1-201ENST00000371817 CYP4F30PQ9H0H9 118 aa10.97□□□□□ -0.65
COL5A1-201ENST00000371817 CHCHD7Q9BUK0 85 aa10.97□□□□□ -0.65
COL5A1-201ENST00000371817 H3BPC8 53 aa10.97□□□□□ -0.65
COL5A1-201ENST00000371817 LINC00337Q8N6G1 96 aa10.97□□□□□ -0.65
COL5A1-201ENST00000371817 USP9XQ93008 2570 aaPredicted RBP10.97□□□□□ -0.65
COL5A1-201ENST00000371817 TRAV10A0A0B4J240 114 aa10.97□□□□□ -0.65
COL5A1-201ENST00000371817 ZNF580Q9UK33 172 aa10.96□□□□□ -0.65
COL5A1-201ENST00000371817 A8MTW9 85 aa10.96□□□□□ -0.66
COL5A1-201ENST00000371817 LINC00482Q8N8I6 264 aa10.96□□□□□ -0.66
COL5A1-201ENST00000371817 IGKV2D-30A0A075B6S6 120 aa10.96□□□□□ -0.66
COL5A1-201ENST00000371817 IGKV2-30P06310 120 aa10.96□□□□□ -0.66
COL5A1-201ENST00000371817 A0A096LNJ9 63 aa10.95□□□□□ -0.66
COL5A1-201ENST00000371817 SSBP3-AS1Q7Z2R9 100 aa10.95□□□□□ -0.66
COL5A1-201ENST00000371817 FAM19A4Q96LR4 140 aa10.95□□□□□ -0.66
COL5A1-201ENST00000371817 ANKRD17O75179 2603 aaKnown RBP10.94□□□□□ -0.66
COL5A1-201ENST00000371817 PLA2G2CQ5R387 149 aa10.94□□□□□ -0.66
COL5A1-201ENST00000371817 IGLV2-18A0A075B6J9 118 aa10.94□□□□□ -0.66
COL5A1-201ENST00000371817 Q6YL49 198 aa10.94□□□□□ -0.66
COL5A1-201ENST00000371817 JMJD1CQ15652 2540 aa10.94□□□□□ -0.66
COL5A1-201ENST00000371817 SMCPP49901 116 aaPredicted RBP10.94□□□□□ -0.66
COL5A1-201ENST00000371817 KTN1-AS1Q86SY8 53 aa10.93□□□□□ -0.66
COL5A1-201ENST00000371817 ADORA2A-AS1P86434 159 aa10.93□□□□□ -0.66
COL5A1-201ENST00000371817 PIEZO1Q92508 2521 aa10.93□□□□□ -0.66
COL5A1-201ENST00000371817 A0A1B0GW54 56 aa10.93□□□□□ -0.66
COL5A1-201ENST00000371817 PRO0461Q9UI25 63 aa10.92□□□□□ -0.66
COL5A1-201ENST00000371817 SPATA3Q8NHX4 192 aa10.92□□□□□ -0.66
COL5A1-201ENST00000371817 IGLV8-61A0A075B6I0 122 aa10.91□□□□□ -0.66
COL5A1-201ENST00000371817 C6orf223Q8N319 242 aa10.91□□□□□ -0.66
COL5A1-201ENST00000371817 SRCAPQ6ZRS2 3230 aa10.91□□□□□ -0.66
COL5A1-201ENST00000371817 FHL2Q14192 279 aa10.91□□□□□ -0.66
COL5A1-201ENST00000371817 TM2D3Q9BRN9 247 aa10.9□□□□□ -0.66
COL5A1-201ENST00000371817 LMO4P61968 165 aa10.9□□□□□ -0.66
COL5A1-201ENST00000371817 LTBP2Q14767 1821 aa10.9□□□□□ -0.66
COL5A1-201ENST00000371817 FBXL19-AS1Q494R0 122 aa10.9□□□□□ -0.66
COL5A1-201ENST00000371817 PIP4P1Q86T03 277 aa10.9□□□□□ -0.67
COL5A1-201ENST00000371817 FSHBP01225 129 aa10.9□□□□□ -0.67
COL5A1-201ENST00000371817 TRAV22A0A0B4J277 110 aa10.89□□□□□ -0.67
COL5A1-201ENST00000371817 IGLV4-60A0A075B6I1 120 aa10.88□□□□□ -0.67
COL5A1-201ENST00000371817 LINC01561Q8N1V8 128 aa10.88□□□□□ -0.67
COL5A1-201ENST00000371817 BPTFQ12830 3046 aa10.87□□□□□ -0.67
COL5A1-201ENST00000371817 IGF2-ASQ6U949 168 aa10.87□□□□□ -0.67
COL5A1-201ENST00000371817 COX8CQ7Z4L0 72 aa10.87□□□□□ -0.67
COL5A1-201ENST00000371817 A0A1B0GUV1 79 aa10.87□□□□□ -0.67
COL5A1-201ENST00000371817 LINC00336Q6ZUF6 198 aa10.85□□□□□ -0.67
COL5A1-201ENST00000371817 LINC01546A6NGU7 62 aa10.84□□□□□ -0.67
COL5A1-201ENST00000371817 LOC110117498A0A087WWA1 95 aa10.84□□□□□ -0.67
COL5A1-201ENST00000371817 ERC2-IT1O76042 136 aa10.83□□□□□ -0.68
COL5A1-201ENST00000371817 KIAA0087Q14695 138 aa10.83□□□□□ -0.68
COL5A1-201ENST00000371817 LCA10Q71F78 164 aa10.83□□□□□ -0.68
COL5A1-201ENST00000371817 Q6ZQT0 140 aa10.83□□□□□ -0.68
COL5A1-201ENST00000371817 UQCR11O14957 56 aa10.82□□□□□ -0.68
COL5A1-201ENST00000371817 A8MUN3 132 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms