RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 CACNA1AO00555 2505 aa15.79■□□□□ 0.12
TM9SF3-201ENST00000371142 LRP4O75096 1905 aa15.78■□□□□ 0.12
TM9SF3-201ENST00000371142 AMELXQ99217 191 aa15.77■□□□□ 0.12
TM9SF3-201ENST00000371142 TRAV7A0A075B6U4 112 aa15.77■□□□□ 0.12
TM9SF3-201ENST00000371142 Q9BRP9 147 aa15.77■□□□□ 0.11
TM9SF3-201ENST00000371142 EML5Q05BV3 1969 aa15.76■□□□□ 0.11
TM9SF3-201ENST00000371142 NAV3Q8IVL0 2385 aa15.76■□□□□ 0.11
TM9SF3-201ENST00000371142 LINC01547P58512 204 aaPredicted RBP15.76■□□□□ 0.11
TM9SF3-201ENST00000371142 C16orf95Q9H693 158 aa15.75■□□□□ 0.11
TM9SF3-201ENST00000371142 DEFB116Q30KQ4 102 aa15.74■□□□□ 0.11
TM9SF3-201ENST00000371142 SOSTDC1Q6X4U4 206 aa15.74■□□□□ 0.11
TM9SF3-201ENST00000371142 CSDC2Q9Y534 153 aaKnown RBP15.73■□□□□ 0.11
TM9SF3-201ENST00000371142 PTPRSQ13332 1948 aa15.73■□□□□ 0.11
TM9SF3-201ENST00000371142 LINC00575Q6W349 94 aa15.72■□□□□ 0.11
TM9SF3-201ENST00000371142 NAV2Q8IVL1 2488 aa15.72■□□□□ 0.11
TM9SF3-201ENST00000371142 C10orf142B7Z368 130 aa15.72■□□□□ 0.11
TM9SF3-201ENST00000371142 PCOTHQ58A44 107 aa15.72■□□□□ 0.11
TM9SF3-201ENST00000371142 LYPD5Q6UWN5 251 aa15.72■□□□□ 0.11
TM9SF3-201ENST00000371142 EXPH5Q8NEV8 1989 aa15.72■□□□□ 0.11
TM9SF3-201ENST00000371142 X6R8D5 127 aa15.71■□□□□ 0.11
TM9SF3-201ENST00000371142 A8MTW9 85 aa15.71■□□□□ 0.1
TM9SF3-201ENST00000371142 TRBV7-6A0A0J9YX20 115 aa15.7■□□□□ 0.1
TM9SF3-201ENST00000371142 BEAN1Q3B7T3 259 aa15.7■□□□□ 0.1
TM9SF3-201ENST00000371142 A0A096LNJ9 63 aa15.69■□□□□ 0.1
TM9SF3-201ENST00000371142 A0A087WSZ3 146 aa15.69■□□□□ 0.1
TM9SF3-201ENST00000371142 PRYO14603 147 aa15.68■□□□□ 0.1
TM9SF3-201ENST00000371142 Q8N3U1 123 aa15.68■□□□□ 0.1
TM9SF3-201ENST00000371142 SMIM26A0A096LP01 95 aa15.68■□□□□ 0.1
TM9SF3-201ENST00000371142 COX8CQ7Z4L0 72 aa15.67■□□□□ 0.1
TM9SF3-201ENST00000371142 CCDC168Q8NDH2 2452 aa15.65■□□□□ 0.1
TM9SF3-201ENST00000371142 SPINK1P00995 79 aa15.65■□□□□ 0.1
TM9SF3-201ENST00000371142 Q6ZRU5 148 aa15.65■□□□□ 0.1
TM9SF3-201ENST00000371142 A0A1B0GUV1 79 aa15.65■□□□□ 0.1
TM9SF3-201ENST00000371142 C1orf134Q5TEV5 83 aa15.64■□□□□ 0.09
TM9SF3-201ENST00000371142 CPAMD8Q8IZJ3 1885 aa15.63■□□□□ 0.09
TM9SF3-201ENST00000371142 C1orf195Q5TG92 126 aa15.63■□□□□ 0.09
TM9SF3-201ENST00000371142 ABCA2Q9BZC7 2435 aa15.63■□□□□ 0.09
TM9SF3-201ENST00000371142 C2orf48Q96LS8 159 aa15.63■□□□□ 0.09
TM9SF3-201ENST00000371142 PRLHP81277 87 aa15.62■□□□□ 0.09
TM9SF3-201ENST00000371142 C2CD3Q4AC94 2353 aa15.62■□□□□ 0.09
TM9SF3-201ENST00000371142 SBSPONQ8IVN8 264 aa15.61■□□□□ 0.09
TM9SF3-201ENST00000371142 H0Y9P7 68 aa15.6■□□□□ 0.09
TM9SF3-201ENST00000371142 TRBV7-7A0A0K0K1E9 115 aa15.6■□□□□ 0.09
TM9SF3-201ENST00000371142 F8WDY8 70 aa15.59■□□□□ 0.09
TM9SF3-201ENST00000371142 MYO18BQ8IUG5 2567 aa15.57■□□□□ 0.08
TM9SF3-201ENST00000371142 PSPHP1O15172 72 aa15.55■□□□□ 0.08
TM9SF3-201ENST00000371142 LINC00337Q8N6G1 96 aa15.55■□□□□ 0.08
TM9SF3-201ENST00000371142 PIEZO2Q9H5I5 2752 aa15.54■□□□□ 0.08
TM9SF3-201ENST00000371142 LINC00846Q9NV44 126 aa15.54■□□□□ 0.08
TM9SF3-201ENST00000371142 HCG22E2RYF7 251 aa15.53■□□□□ 0.08
TM9SF3-201ENST00000371142 C22orf24Q9Y442 160 aa15.53■□□□□ 0.08
TM9SF3-201ENST00000371142 PMAIP1Q13794 54 aa15.53■□□□□ 0.08
TM9SF3-201ENST00000371142 LINC01561Q8N1V8 128 aa15.52■□□□□ 0.07
TM9SF3-201ENST00000371142 SMCR5Q8TEV8 140 aa15.51■□□□□ 0.07
TM9SF3-201ENST00000371142 AGRNO00468 2067 aa15.51■□□□□ 0.07
TM9SF3-201ENST00000371142 FHL3Q13643 280 aa15.5■□□□□ 0.07
TM9SF3-201ENST00000371142 IGF2RP11717 2491 aa15.5■□□□□ 0.07
TM9SF3-201ENST00000371142 FSHBP01225 129 aa15.5■□□□□ 0.07
TM9SF3-201ENST00000371142 ADAMTS20P59510 1910 aa15.49■□□□□ 0.07
TM9SF3-201ENST00000371142 C11orf72Q8NBR9 251 aa15.48■□□□□ 0.07
TM9SF3-201ENST00000371142 NCOR2Q9Y618 2525 aa15.48■□□□□ 0.07
TM9SF3-201ENST00000371142 KIF25-AS1Q9Y6Z4 181 aa15.48■□□□□ 0.07
TM9SF3-201ENST00000371142 SRCAPQ6ZRS2 3230 aa15.47■□□□□ 0.07
TM9SF3-201ENST00000371142 CRYGAP11844 174 aa15.47■□□□□ 0.07
TM9SF3-201ENST00000371142 TMEM254Q8TBM7 123 aa15.46■□□□□ 0.07
TM9SF3-201ENST00000371142 KIAA0087Q14695 138 aa15.44■□□□□ 0.06
TM9SF3-201ENST00000371142 LIMD2Q9BT23 127 aa15.42■□□□□ 0.06
TM9SF3-201ENST00000371142 COL5A1P20908 1838 aaPredicted RBP15.42■□□□□ 0.06
TM9SF3-201ENST00000371142 Q8N2B8 174 aa15.42■□□□□ 0.06
TM9SF3-201ENST00000371142 Q9UF83 564 aa15.41■□□□□ 0.06
TM9SF3-201ENST00000371142 IGKV2D-30A0A075B6S6 120 aa15.4■□□□□ 0.06
TM9SF3-201ENST00000371142 IGKV2-30P06310 120 aa15.4■□□□□ 0.06
TM9SF3-201ENST00000371142 MDFIQ99750 246 aa15.39■□□□□ 0.05
TM9SF3-201ENST00000371142 IGLV5-39A0A0G2JS06 123 aa15.39■□□□□ 0.05
TM9SF3-201ENST00000371142 C1orf64Q8NEQ6 169 aa15.39■□□□□ 0.05
TM9SF3-201ENST00000371142 SMIM29Q86T20 159 aa15.38■□□□□ 0.05
TM9SF3-201ENST00000371142 TET2Q6N021 2002 aaPredicted RBP15.38■□□□□ 0.05
TM9SF3-201ENST00000371142 DOPEY1Q5JWR5 2465 aa15.37■□□□□ 0.05
TM9SF3-201ENST00000371142 NHLRC4P0CG21 123 aaPredicted RBP15.37■□□□□ 0.05
TM9SF3-201ENST00000371142 CXCL6P80162 114 aa15.36■□□□□ 0.05
TM9SF3-201ENST00000371142 IGHV3OR16-9A0A0B4J2B5 98 aa15.35■□□□□ 0.05
TM9SF3-201ENST00000371142 SPATA3Q8NHX4 192 aa15.35■□□□□ 0.05
TM9SF3-201ENST00000371142 LINC00167Q96N53 147 aa15.35■□□□□ 0.05
TM9SF3-201ENST00000371142 hDV103S1A0JD37 113 aa15.34■□□□□ 0.05
TM9SF3-201ENST00000371142 C6orf48Q9UBA6 75 aa15.34■□□□□ 0.05
TM9SF3-201ENST00000371142 SPACA4Q8TDM5 124 aa15.33■□□□□ 0.05
TM9SF3-201ENST00000371142 LINC01546A6NGU7 62 aa15.33■□□□□ 0.04
TM9SF3-201ENST00000371142 MOBPQ13875 183 aa15.33■□□□□ 0.04
TM9SF3-201ENST00000371142 LINC00315P59091 139 aa15.32■□□□□ 0.04
TM9SF3-201ENST00000371142 C7orf65Q6ZTY9 151 aa15.32■□□□□ 0.04
TM9SF3-201ENST00000371142 FAM19A4Q96LR4 140 aa15.31■□□□□ 0.04
TM9SF3-201ENST00000371142 CDIP1Q9H305 208 aa15.31■□□□□ 0.04
TM9SF3-201ENST00000371142 FAM218AQ96MZ4 157 aa15.25■□□□□ 0.03
TM9SF3-201ENST00000371142 MYO9AB2RTY4 2548 aa15.25■□□□□ 0.03
TM9SF3-201ENST00000371142 PHF5AQ7RTV0 110 aaKnown RBP15.23■□□□□ 0.03
TM9SF3-201ENST00000371142 CHTF8P0CG12 524 aa15.19■□□□□ 0.02
TM9SF3-201ENST00000371142 ELOF1P60002 83 aaKnown RBP15.19■□□□□ 0.02
TM9SF3-201ENST00000371142 SMCPP49901 116 aaPredicted RBP15.18■□□□□ 0.02
TM9SF3-201ENST00000371142 IGLV5-45A0A087WSX0 123 aa15.17■□□□□ 0.02
TM9SF3-201ENST00000371142 A0A1B0GU69 56 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms