RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 RPL32P62910 135 aaKnown RBP6.57□□□□□ -1.36
SMARCA1-202ENST00000371122 RBMY1FQ15415 496 aaKnown RBP6.57□□□□□ -1.36
SMARCA1-202ENST00000371122 IGSF10Q6WRI0 2623 aa6.57□□□□□ -1.36
SMARCA1-202ENST00000371122 XGP55808 180 aa6.56□□□□□ -1.36
SMARCA1-202ENST00000371122 A0A0B4J2C4 111 aa6.55□□□□□ -1.36
SMARCA1-202ENST00000371122 CDK2AP2O75956 126 aa6.55□□□□□ -1.36
SMARCA1-202ENST00000371122 WFDC9Q8NEX5 89 aa6.55□□□□□ -1.36
SMARCA1-202ENST00000371122 H3BT86 120 aa6.55□□□□□ -1.36
SMARCA1-202ENST00000371122 A8MTW9 85 aa6.55□□□□□ -1.36
SMARCA1-202ENST00000371122 M0R2N4 97 aa6.55□□□□□ -1.36
SMARCA1-202ENST00000371122 TIRAPP58753 221 aa6.55□□□□□ -1.36
SMARCA1-202ENST00000371122 UBE2D1P51668 147 aa6.54□□□□□ -1.36
SMARCA1-202ENST00000371122 RBM3P98179 157 aaKnown RBP6.54□□□□□ -1.36
SMARCA1-202ENST00000371122 LINC00959A0A1B0GUT2 108 aa6.54□□□□□ -1.36
SMARCA1-202ENST00000371122 UNQ6190/PRO20217Q6UXQ8 127 aa6.54□□□□□ -1.36
SMARCA1-202ENST00000371122 DIRC1Q969H9 104 aa6.54□□□□□ -1.36
SMARCA1-202ENST00000371122 NDUFS5O43920 106 aa6.54□□□□□ -1.36
SMARCA1-202ENST00000371122 NANOS2P60321 138 aaKnown RBP6.54□□□□□ -1.36
SMARCA1-202ENST00000371122 LRRC75A-AS1Q8N1F1 130 aa6.54□□□□□ -1.36
SMARCA1-202ENST00000371122 CDC42SE2Q9NRR3 84 aa6.54□□□□□ -1.36
SMARCA1-202ENST00000371122 TRBV6-4A0A1B0GX49 114 aa6.53□□□□□ -1.36
SMARCA1-202ENST00000371122 NSD1Q96L73 2696 aaPredicted RBP6.53□□□□□ -1.36
SMARCA1-202ENST00000371122 NREPQ16612 68 aa6.53□□□□□ -1.36
SMARCA1-202ENST00000371122 RPL37AP8A6NKH3 93 aa6.53□□□□□ -1.36
SMARCA1-202ENST00000371122 IGHV4-30-4P0DP06 118 aa6.53□□□□□ -1.36
SMARCA1-202ENST00000371122 HILS1P60008 231 aa6.53□□□□□ -1.36
SMARCA1-202ENST00000371122 KPRPQ5T749 579 aaPredicted RBP6.53□□□□□ -1.36
SMARCA1-202ENST00000371122 FAM19A5Q7Z5A7 132 aaPredicted RBP6.53□□□□□ -1.36
SMARCA1-202ENST00000371122 SMIM11BQ8TCY0 68 aa6.52□□□□□ -1.37
SMARCA1-202ENST00000371122 CHCHD7Q9BUK0 85 aa6.52□□□□□ -1.37
SMARCA1-202ENST00000371122 Q6ZQY7 126 aa6.52□□□□□ -1.37
SMARCA1-202ENST00000371122 C3orf84H3BNL1 204 aa6.52□□□□□ -1.37
SMARCA1-202ENST00000371122 UBE2D3P61077 147 aa6.52□□□□□ -1.37
SMARCA1-202ENST00000371122 UBE2D2P62837 147 aa6.52□□□□□ -1.37
SMARCA1-202ENST00000371122 PPDPFQ9H3Y8 114 aa6.52□□□□□ -1.37
SMARCA1-202ENST00000371122 PYGO1Q9Y3Y4 419 aa6.52□□□□□ -1.37
SMARCA1-202ENST00000371122 UTP20O75691 2785 aaKnown RBP6.52□□□□□ -1.37
SMARCA1-202ENST00000371122 MRPS36P82909 103 aaKnown RBP6.51□□□□□ -1.37
SMARCA1-202ENST00000371122 SMIM1B2RUZ4 78 aa6.51□□□□□ -1.37
SMARCA1-202ENST00000371122 C6orf223Q8N319 242 aa6.51□□□□□ -1.37
SMARCA1-202ENST00000371122 LRCOL1A6NCL2 159 aa6.5□□□□□ -1.37
SMARCA1-202ENST00000371122 H7C423 109 aa6.5□□□□□ -1.37
SMARCA1-202ENST00000371122 ENHOQ6UWT2 76 aa6.5□□□□□ -1.37
SMARCA1-202ENST00000371122 RMI2Q96E14 147 aa6.5□□□□□ -1.37
SMARCA1-202ENST00000371122 UFSP1Q6NVU6 142 aa6.5□□□□□ -1.37
SMARCA1-202ENST00000371122 C20orf197Q8N268 126 aa6.5□□□□□ -1.37
SMARCA1-202ENST00000371122 NDUFV3P56181 108 aaKnown RBP6.5□□□□□ -1.37
SMARCA1-202ENST00000371122 COX7BP24311 80 aa6.5□□□□□ -1.37
SMARCA1-202ENST00000371122 FUSP35637 526 aaKnown RBP eCLIP6.5□□□□□ -1.37
SMARCA1-202ENST00000371122 KIF25-AS1Q9Y6Z4 181 aa6.5□□□□□ -1.37
SMARCA1-202ENST00000371122 TRBV30A0A0K0K1B3 111 aa6.49□□□□□ -1.37
SMARCA1-202ENST00000371122 CYSRT1A8MQ03 144 aa6.49□□□□□ -1.37
SMARCA1-202ENST00000371122 ZANQ9Y493 2812 aa6.49□□□□□ -1.37
SMARCA1-202ENST00000371122 CELSR2Q9HCU4 2923 aa6.49□□□□□ -1.37
SMARCA1-202ENST00000371122 A0A0J9YWU9 116 aa6.49□□□□□ -1.37
SMARCA1-202ENST00000371122 IBA57-AS1B1ANH7 110 aa6.49□□□□□ -1.37
SMARCA1-202ENST00000371122 Q8N3U1 123 aa6.49□□□□□ -1.37
SMARCA1-202ENST00000371122 LYRM9A8MSI8 78 aa6.48□□□□□ -1.37
SMARCA1-202ENST00000371122 IGLV1-51P01701 117 aa6.48□□□□□ -1.37
SMARCA1-202ENST00000371122 UBE2AP49459 152 aa6.48□□□□□ -1.37
SMARCA1-202ENST00000371122 LINC00315P59091 139 aa6.48□□□□□ -1.37
SMARCA1-202ENST00000371122 A0A087WVE0 104 aa6.48□□□□□ -1.37
SMARCA1-202ENST00000371122 CITED1Q99966 193 aa6.48□□□□□ -1.37
SMARCA1-202ENST00000371122 TMEM256-PLSCR3K7ERE1 68 aa6.48□□□□□ -1.37
SMARCA1-202ENST00000371122 Q6ZTC4 211 aa6.48□□□□□ -1.37
SMARCA1-202ENST00000371122 LST1O00453 97 aa6.47□□□□□ -1.37
SMARCA1-202ENST00000371122 ACYP1P07311 99 aa6.47□□□□□ -1.37
SMARCA1-202ENST00000371122 CXCL5P42830 114 aa6.47□□□□□ -1.37
SMARCA1-202ENST00000371122 SVIPQ8NHG7 77 aa6.47□□□□□ -1.37
SMARCA1-202ENST00000371122 COX8CQ7Z4L0 72 aa6.47□□□□□ -1.37
SMARCA1-202ENST00000371122 FHL2Q14192 279 aa6.46□□□□□ -1.37
SMARCA1-202ENST00000371122 PRR4Q16378 134 aa6.46□□□□□ -1.37
SMARCA1-202ENST00000371122 CD164L2Q6UWJ8 174 aa6.46□□□□□ -1.37
SMARCA1-202ENST00000371122 LINC00643Q86TS7 51 aa6.46□□□□□ -1.37
SMARCA1-202ENST00000371122 JMJD7-PLA2G4BH0Y9G9 81 aa6.46□□□□□ -1.38
SMARCA1-202ENST00000371122 CCDC179H3BU77 68 aa6.46□□□□□ -1.38
SMARCA1-202ENST00000371122 A0A087WZ39 114 aa6.46□□□□□ -1.38
SMARCA1-202ENST00000371122 SYCNQ0VAF6 134 aa6.46□□□□□ -1.38
SMARCA1-202ENST00000371122 MIFP14174 115 aa6.45□□□□□ -1.38
SMARCA1-202ENST00000371122 NTM-AS1Q6ZSK4 140 aa6.45□□□□□ -1.38
SMARCA1-202ENST00000371122 UPK3BQ9BT76 320 aa6.45□□□□□ -1.38
SMARCA1-202ENST00000371122 SMIM9A6NGZ8 99 aa6.45□□□□□ -1.38
SMARCA1-202ENST00000371122 CCKP06307 115 aa6.45□□□□□ -1.38
SMARCA1-202ENST00000371122 Q8N2B8 174 aa6.45□□□□□ -1.38
SMARCA1-202ENST00000371122 A0A087WYN8 130 aa6.45□□□□□ -1.38
SMARCA1-202ENST00000371122 FAM19A1Q7Z5A9 133 aa6.45□□□□□ -1.38
SMARCA1-202ENST00000371122 H0Y9J4 135 aa6.44□□□□□ -1.38
SMARCA1-202ENST00000371122 ITPR2Q14571 2701 aa6.44□□□□□ -1.38
SMARCA1-202ENST00000371122 WFDC10BQ8IUB3 73 aa6.44□□□□□ -1.38
SMARCA1-202ENST00000371122 AMELXQ99217 191 aa6.44□□□□□ -1.38
SMARCA1-202ENST00000371122 ATOX1O00244 68 aa6.43□□□□□ -1.38
SMARCA1-202ENST00000371122 C5orf47Q569G3 176 aa6.43□□□□□ -1.38
SMARCA1-202ENST00000371122 SPANXDQ9BXN6 97 aa6.43□□□□□ -1.38
SMARCA1-202ENST00000371122 SNURFQ9Y675 71 aa6.43□□□□□ -1.38
SMARCA1-202ENST00000371122 HRCT1Q6UXD1 115 aa6.43□□□□□ -1.38
SMARCA1-202ENST00000371122 TENM4Q6N022 2769 aa6.43□□□□□ -1.38
SMARCA1-202ENST00000371122 CELA1Q9UNI1 258 aa6.43□□□□□ -1.38
SMARCA1-202ENST00000371122 BPY2O14599 106 aa6.42□□□□□ -1.38
SMARCA1-202ENST00000371122 C11orf72Q8NBR9 251 aa6.42□□□□□ -1.38
SMARCA1-202ENST00000371122 TRBV10-3A0A0K0K1G6 114 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms